RNA–Protein interactions for RNA: ENST00000469159.1

NCSTN-212, Transcript of nicastrin, humanhuman

TSL 2

Gene NCSTN, Length 856 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-212ENST00000469159 DIP2BQ9P265 1576 aa14.86□□□□□ -0.03
NCSTN-212ENST00000469159 NPM1P06748 294 aaKnown RBP eCLIP14.86□□□□□ -0.03
NCSTN-212ENST00000469159 FHAD1B1AJZ9 1412 aa14.83□□□□□ -0.03
NCSTN-212ENST00000469159 JPH4Q96JJ6 628 aa14.83□□□□□ -0.04
NCSTN-212ENST00000469159 WRNQ14191 1432 aaPredicted RBP eCLIP14.77□□□□□ -0.04
NCSTN-212ENST00000469159 ADCY10Q96PN6 1610 aa14.76□□□□□ -0.05
NCSTN-212ENST00000469159 ADGRL1O94910 1474 aa14.76□□□□□ -0.05
NCSTN-212ENST00000469159 TSPOAP1O95153 1857 aa14.74□□□□□ -0.05
NCSTN-212ENST00000469159 HECW2Q9P2P5 1572 aa14.74□□□□□ -0.05
NCSTN-212ENST00000469159 ERICH3Q5RHP9 1530 aa14.74□□□□□ -0.05
NCSTN-212ENST00000469159 RUSC2Q8N2Y8 1516 aa14.68□□□□□ -0.06
NCSTN-212ENST00000469159 FBXO41Q8TF61 875 aa14.67□□□□□ -0.06
NCSTN-212ENST00000469159 TOP2BQ02880 1626 aa14.63□□□□□ -0.07
NCSTN-212ENST00000469159 BIVM-ERCC5R4GMW8 1640 aa14.61□□□□□ -0.07
NCSTN-212ENST00000469159 COL17A1Q9UMD9 1497 aaPredicted RBP14.61□□□□□ -0.07
NCSTN-212ENST00000469159 PPRC1Q5VV67 1664 aaKnown RBP14.61□□□□□ -0.07
NCSTN-212ENST00000469159 GLI2P10070 1586 aa14.6□□□□□ -0.07
NCSTN-212ENST00000469159 KIAA0586Q9BVV6 1533 aa14.58□□□□□ -0.08
NCSTN-212ENST00000469159 ASXL2Q76L83 1435 aa14.58□□□□□ -0.08
NCSTN-212ENST00000469159 PLB1Q6P1J6 1458 aa14.57□□□□□ -0.08
NCSTN-212ENST00000469159 PTPRGP23470 1445 aa14.57□□□□□ -0.08
NCSTN-212ENST00000469159 ABCC2Q92887 1545 aa14.56□□□□□ -0.08
NCSTN-212ENST00000469159 TEX14Q8IWB6 1497 aa14.5□□□□□ -0.09
NCSTN-212ENST00000469159 TNIKQ9UKE5 1360 aa14.48□□□□□ -0.09
NCSTN-212ENST00000469159 MAP3K4Q9Y6R4 1608 aa14.48□□□□□ -0.09
NCSTN-212ENST00000469159 TTBK1Q5TCY1 1321 aaPredicted RBP14.48□□□□□ -0.09
NCSTN-212ENST00000469159 EPRSP07814 1512 aaKnown RBP14.48□□□□□ -0.09
NCSTN-212ENST00000469159 UHRF1BP1LA0JNW5 1464 aa14.47□□□□□ -0.09
NCSTN-212ENST00000469159 CARMIL2Q6F5E8 1435 aa14.45□□□□□ -0.1
NCSTN-212ENST00000469159 CUL7Q14999 1698 aa14.44□□□□□ -0.1
NCSTN-212ENST00000469159 IGF1RP08069 1367 aa14.44□□□□□ -0.1
NCSTN-212ENST00000469159 LMTK3Q96Q04 1460 aa14.44□□□□□ -0.1
NCSTN-212ENST00000469159 UACAQ9BZF9 1416 aa14.43□□□□□ -0.1
NCSTN-212ENST00000469159 KDM5BQ9UGL1 1544 aa14.41□□□□□ -0.1
NCSTN-212ENST00000469159 ZCCHC11Q5TAX3 1644 aaKnown RBP14.33□□□□□ -0.11
NCSTN-212ENST00000469159 KIF27Q86VH2 1401 aa14.33□□□□□ -0.11
NCSTN-212ENST00000469159 MAGI3Q5TCQ9 1506 aa14.33□□□□□ -0.12
NCSTN-212ENST00000469159 DISP1Q96F81 1524 aa14.33□□□□□ -0.12
NCSTN-212ENST00000469159 SOCS7O14512 581 aa14.33□□□□□ -0.12
NCSTN-212ENST00000469159 PTPRMP28827 1452 aa14.32□□□□□ -0.12
NCSTN-212ENST00000469159 WDR7Q9Y4E6 1490 aa14.32□□□□□ -0.12
NCSTN-212ENST00000469159 IQGAP2Q13576 1575 aa14.32□□□□□ -0.12
NCSTN-212ENST00000469159 KIF21BO75037 1637 aa14.32□□□□□ -0.12
NCSTN-212ENST00000469159 CD109Q6YHK3 1445 aa14.32□□□□□ -0.12
NCSTN-212ENST00000469159 CARMIL1Q5VZK9 1371 aa14.31□□□□□ -0.12
NCSTN-212ENST00000469159 ILDR2Q71H61 639 aa14.3□□□□□ -0.12
NCSTN-212ENST00000469159 SUPT5HO00267 1087 aaKnown RBP14.28□□□□□ -0.12
NCSTN-212ENST00000469159 PCF11O94913 1555 aaKnown RBP14.27□□□□□ -0.12
NCSTN-212ENST00000469159 ADAMTSL3P82987 1691 aa14.26□□□□□ -0.13
NCSTN-212ENST00000469159 CFAP43Q8NDM7 1665 aa14.26□□□□□ -0.13
NCSTN-212ENST00000469159 ARAP3Q8WWN8 1544 aa14.25□□□□□ -0.13
NCSTN-212ENST00000469159 DISP3Q9P2K9 1392 aa14.24□□□□□ -0.13
NCSTN-212ENST00000469159 KCNH8Q96L42 1107 aa14.24□□□□□ -0.13
NCSTN-212ENST00000469159 CERKQ8TCT0 537 aa14.23□□□□□ -0.13
NCSTN-212ENST00000469159 UGGT2Q9NYU1 1516 aa14.23□□□□□ -0.13
NCSTN-212ENST00000469159 KIAA0556O60303 1618 aa14.19□□□□□ -0.14
NCSTN-212ENST00000469159 HSPA2P54652 639 aa14.17□□□□□ -0.14
NCSTN-212ENST00000469159 BCORL1Q5H9F3 1711 aa14.16□□□□□ -0.14
NCSTN-212ENST00000469159 PHLDB1Q86UU1 1377 aa14.16□□□□□ -0.14
NCSTN-212ENST00000469159 MADDQ8WXG6 1647 aa14.15□□□□□ -0.14
NCSTN-212ENST00000469159 RAPGEF3O95398 923 aa14.14□□□□□ -0.15
NCSTN-212ENST00000469159 ARID4BQ4LE39 1312 aaPredicted RBP14.14□□□□□ -0.15
NCSTN-212ENST00000469159 ABCA8O94911 1581 aa14.12□□□□□ -0.15
NCSTN-212ENST00000469159 RAPGEF2Q9Y4G8 1499 aa14.1□□□□□ -0.15
NCSTN-212ENST00000469159 RIMS1Q86UR5 1692 aaKnown RBP14.07□□□□□ -0.16
NCSTN-212ENST00000469159 NEO1Q92859 1461 aa14.06□□□□□ -0.16
NCSTN-212ENST00000469159 GOLGA3Q08378 1498 aa14.06□□□□□ -0.16
NCSTN-212ENST00000469159 FRMPD1Q5SYB0 1578 aa14.05□□□□□ -0.16
NCSTN-212ENST00000469159 SPATA31D1Q6ZQQ2 1576 aa14.05□□□□□ -0.16
NCSTN-212ENST00000469159 ABCA9Q8IUA7 1624 aa14.05□□□□□ -0.16
NCSTN-212ENST00000469159 ATP10BO94823 1461 aa14.02□□□□□ -0.16
NCSTN-212ENST00000469159 PLPPR3Q6T4P5 718 aa14.02□□□□□ -0.17
NCSTN-212ENST00000469159 ARHGEF40Q8TER5 1519 aa14□□□□□ -0.17
NCSTN-212ENST00000469159 POGZQ7Z3K3 1410 aa14□□□□□ -0.17
NCSTN-212ENST00000469159 ARID3CA6NKF2 412 aa13.99□□□□□ -0.17
NCSTN-212ENST00000469159 DMRT2Q9Y5R5 561 aa13.99□□□□□ -0.17
NCSTN-212ENST00000469159 YEATS2Q9ULM3 1422 aa13.98□□□□□ -0.17
NCSTN-212ENST00000469159 FANCAO15360 1455 aa13.97□□□□□ -0.17
NCSTN-212ENST00000469159 CTTNBP2Q8WZ74 1663 aa13.95□□□□□ -0.18
NCSTN-212ENST00000469159 DENND4BO75064 1496 aaPredicted RBP13.95□□□□□ -0.18
NCSTN-212ENST00000469159 FAM9AQ8IZU1 332 aaPredicted RBP13.95□□□□□ -0.18
NCSTN-212ENST00000469159 FHOD3Q2V2M9 1422 aa13.95□□□□□ -0.18
NCSTN-212ENST00000469159 AKNAQ7Z591 1439 aa13.95□□□□□ -0.18
NCSTN-212ENST00000469159 RICTORQ6R327 1708 aa13.93□□□□□ -0.18
NCSTN-212ENST00000469159 TTC37Q6PGP7 1564 aa13.93□□□□□ -0.18
NCSTN-212ENST00000469159 SIGLEC1Q9BZZ2 1709 aa13.92□□□□□ -0.18
NCSTN-212ENST00000469159 STRCQ7RTU9 1775 aa13.91□□□□□ -0.18
NCSTN-212ENST00000469159 MLECQ14165 292 aa13.91□□□□□ -0.18
NCSTN-212ENST00000469159 PREX1Q8TCU6 1659 aa13.9□□□□□ -0.18
NCSTN-212ENST00000469159 ZMYM4Q5VZL5 1548 aa13.9□□□□□ -0.19
NCSTN-212ENST00000469159 ZFYVE16Q7Z3T8 1539 aa13.9□□□□□ -0.19
NCSTN-212ENST00000469159 FER1L4A9Z1Z3 1794 aa13.89□□□□□ -0.19
NCSTN-212ENST00000469159 MAGI2Q86UL8 1455 aa13.89□□□□□ -0.19
NCSTN-212ENST00000469159 EFCAB5A4FU69 1503 aa13.89□□□□□ -0.19
NCSTN-212ENST00000469159 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.87□□□□□ -0.19
NCSTN-212ENST00000469159 HNRNPUL2Q1KMD3 747 aaKnown RBP13.87□□□□□ -0.19
NCSTN-212ENST00000469159 P3H3Q8IVL6 736 aa13.87□□□□□ -0.19
NCSTN-212ENST00000469159 PTPRTO14522 1441 aa13.87□□□□□ -0.19
NCSTN-212ENST00000469159 IQSEC2Q5JU85 1478 aa13.87□□□□□ -0.19
NCSTN-212ENST00000469159 ARHGEF12Q9NZN5 1544 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms