RNA–Protein interactions for RNA: ENST00000469159.1

NCSTN-212, Transcript of nicastrin, humanhuman

TSL 2

Gene NCSTN, Length 856 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-212ENST00000469159 NISCHQ9Y2I1 1504 aa20.73■□□□□ 0.91
NCSTN-212ENST00000469159 ABCC9O60706 1549 aa19.43■□□□□ 0.7
NCSTN-212ENST00000469159 CCDC180Q9P1Z9 1646 aa18.83■□□□□ 0.61
NCSTN-212ENST00000469159 DNAJC5BQ9UF47 199 aa18.81■□□□□ 0.6
NCSTN-212ENST00000469159 RB1CC1Q8TDY2 1594 aa18.23■□□□□ 0.51
NCSTN-212ENST00000469159 PABPN1Q86U42 306 aaKnown RBP eCLIP18.02■□□□□ 0.48
NCSTN-212ENST00000469159 NACADO15069 1562 aa17.98■□□□□ 0.47
NCSTN-212ENST00000469159 UNC13AQ9UPW8 1703 aa17.77■□□□□ 0.44
NCSTN-212ENST00000469159 DCAF8L2P0C7V8 631 aa17.75■□□□□ 0.43
NCSTN-212ENST00000469159 BICRAQ9NZM4 1560 aa17.73■□□□□ 0.43
NCSTN-212ENST00000469159 DNAJC5Q9H3Z4 198 aa17.72■□□□□ 0.43
NCSTN-212ENST00000469159 CECR2Q9BXF3 1484 aa17.58■□□□□ 0.41
NCSTN-212ENST00000469159 MYO15BQ96JP2 1530 aa17.56■□□□□ 0.4
NCSTN-212ENST00000469159 CC2D2AQ9P2K1 1620 aa17.52■□□□□ 0.4
NCSTN-212ENST00000469159 SHROOM4Q9ULL8 1493 aa17.45■□□□□ 0.38
NCSTN-212ENST00000469159 EIF4G1Q04637 1599 aaKnown RBP17.34■□□□□ 0.37
NCSTN-212ENST00000469159 SCRIBQ14160 1630 aa17.11■□□□□ 0.33
NCSTN-212ENST00000469159 DCAF1Q9Y4B6 1507 aa17.11■□□□□ 0.33
NCSTN-212ENST00000469159 ZCCHC6Q5VYS8 1495 aaKnown RBP17.05■□□□□ 0.32
NCSTN-212ENST00000469159 CUX2O14529 1486 aa17.01■□□□□ 0.31
NCSTN-212ENST00000469159 ERCC6Q03468 1493 aa16.81■□□□□ 0.28
NCSTN-212ENST00000469159 TRIM41Q8WV44 630 aa16.64■□□□□ 0.25
NCSTN-212ENST00000469159 NCAPD3P42695 1498 aa16.63■□□□□ 0.25
NCSTN-212ENST00000469159 NESP48681 1621 aa16.52■□□□□ 0.24
NCSTN-212ENST00000469159 ATAD2BQ9ULI0 1458 aa16.48■□□□□ 0.23
NCSTN-212ENST00000469159 THOC2Q8NI27 1593 aaKnown RBP16.46■□□□□ 0.23
NCSTN-212ENST00000469159 HMGXB3Q12766 1538 aa16.42■□□□□ 0.22
NCSTN-212ENST00000469159 SMARCA2P51531 1590 aa16.38■□□□□ 0.21
NCSTN-212ENST00000469159 LAMC3Q9Y6N6 1575 aa16.31■□□□□ 0.2
NCSTN-212ENST00000469159 SMARCA4P51532 1647 aa16.27■□□□□ 0.2
NCSTN-212ENST00000469159 BAZ1BQ9UIG0 1483 aaKnown RBP16.27■□□□□ 0.19
NCSTN-212ENST00000469159 PDS5BQ9NTI5 1447 aa16.27■□□□□ 0.19
NCSTN-212ENST00000469159 KIF21AQ7Z4S6 1674 aa16.25■□□□□ 0.19
NCSTN-212ENST00000469159 OSCARQ8IYS5 282 aa16.16■□□□□ 0.18
NCSTN-212ENST00000469159 PEG3Q9GZU2 1588 aa16.16■□□□□ 0.18
NCSTN-212ENST00000469159 BAZ1AQ9NRL2 1556 aaPredicted RBP16.14■□□□□ 0.17
NCSTN-212ENST00000469159 MRC2Q9UBG0 1479 aa16.14■□□□□ 0.17
NCSTN-212ENST00000469159 WDR62O43379 1518 aa16.12■□□□□ 0.17
NCSTN-212ENST00000469159 CADPSQ9ULU8 1353 aa16.09■□□□□ 0.17
NCSTN-212ENST00000469159 MROH2BQ7Z745 1585 aa15.96■□□□□ 0.15
NCSTN-212ENST00000469159 RIMBP3CA6NJZ7 1639 aa15.96■□□□□ 0.15
NCSTN-212ENST00000469159 RIMBP3BA6NNM3 1639 aa15.96■□□□□ 0.15
NCSTN-212ENST00000469159 RIMBP3Q9UFD9 1639 aa15.96■□□□□ 0.15
NCSTN-212ENST00000469159 CEP164Q9UPV0 1460 aa15.95■□□□□ 0.14
NCSTN-212ENST00000469159 FANCD2Q9BXW9 1451 aa15.89■□□□□ 0.13
NCSTN-212ENST00000469159 ARHGEF11O15085 1522 aa15.87■□□□□ 0.13
NCSTN-212ENST00000469159 TRHP20396 242 aaPredicted RBP15.81■□□□□ 0.12
NCSTN-212ENST00000469159 CYB5RLQ6IPT4 315 aa15.81■□□□□ 0.12
NCSTN-212ENST00000469159 URB2Q14146 1524 aaKnown RBP15.79■□□□□ 0.12
NCSTN-212ENST00000469159 AEBP2Q6ZN18 517 aaPredicted RBP15.79■□□□□ 0.12
NCSTN-212ENST00000469159 CFTRP13569 1480 aa15.78■□□□□ 0.12
NCSTN-212ENST00000469159 WIZO95785 1651 aa15.72■□□□□ 0.11
NCSTN-212ENST00000469159 ZNF608Q9ULD9 1512 aaPredicted RBP15.7■□□□□ 0.1
NCSTN-212ENST00000469159 ARAP1Q96P48 1450 aa15.67■□□□□ 0.1
NCSTN-212ENST00000469159 IFT140Q96RY7 1462 aa15.66■□□□□ 0.1
NCSTN-212ENST00000469159 RSF1Q96T23 1441 aaPredicted RBP15.59■□□□□ 0.09
NCSTN-212ENST00000469159 EIF4G3O43432 1585 aaKnown RBP15.55■□□□□ 0.08
NCSTN-212ENST00000469159 CHD1O14646 1710 aa15.52■□□□□ 0.08
NCSTN-212ENST00000469159 TOPBP1Q92547 1522 aa15.52■□□□□ 0.07
NCSTN-212ENST00000469159 FBLN2P98095 1184 aa15.5■□□□□ 0.07
NCSTN-212ENST00000469159 TOP2AP11388 1531 aaKnown RBP15.49■□□□□ 0.07
NCSTN-212ENST00000469159 AQRO60306 1485 aaKnown RBP eCLIP15.49■□□□□ 0.07
NCSTN-212ENST00000469159 PRDM2Q13029 1718 aa15.48■□□□□ 0.07
NCSTN-212ENST00000469159 ABCC8Q09428 1581 aa15.45■□□□□ 0.06
NCSTN-212ENST00000469159 TARBP1Q13395 1621 aaKnown RBP15.43■□□□□ 0.06
NCSTN-212ENST00000469159 DNMBPQ6XZF7 1577 aa15.4■□□□□ 0.06
NCSTN-212ENST00000469159 CLASP1Q7Z460 1538 aa15.38■□□□□ 0.05
NCSTN-212ENST00000469159 CCDC88BA6NC98 1476 aa15.34■□□□□ 0.05
NCSTN-212ENST00000469159 POLA1P09884 1462 aaPredicted RBP15.33■□□□□ 0.04
NCSTN-212ENST00000469159 SYNJ1O43426 1573 aa15.3■□□□□ 0.04
NCSTN-212ENST00000469159 TDRD9Q8NDG6 1382 aaKnown RBP15.3■□□□□ 0.04
NCSTN-212ENST00000469159 CHMP7Q8WUX9 453 aaPredicted RBP15.3■□□□□ 0.04
NCSTN-212ENST00000469159 SNAPC4Q5SXM2 1469 aa15.29■□□□□ 0.04
NCSTN-212ENST00000469159 GAPVD1Q14C86 1478 aa15.27■□□□□ 0.04
NCSTN-212ENST00000469159 RAD54L2Q9Y4B4 1467 aa15.27■□□□□ 0.04
NCSTN-212ENST00000469159 SOGA1O94964 1423 aa15.26■□□□□ 0.03
NCSTN-212ENST00000469159 MAGI1Q96QZ7 1491 aaPredicted RBP15.24■□□□□ 0.03
NCSTN-212ENST00000469159 WDR97A6NE52 1622 aa15.22■□□□□ 0.03
NCSTN-212ENST00000469159 ILDR1Q86SU0 546 aaPredicted RBP15.21■□□□□ 0.03
NCSTN-212ENST00000469159 SYNJ2O15056 1496 aa15.2■□□□□ 0.02
NCSTN-212ENST00000469159 GRIN2BQ13224 1484 aa15.18■□□□□ 0.02
NCSTN-212ENST00000469159 FGD5Q6ZNL6 1462 aa15.13■□□□□ 0.01
NCSTN-212ENST00000469159 ERCC6L2Q5T890 1561 aa15.09■□□□□ 0.01
NCSTN-212ENST00000469159 KDM4FA0A1W2PPD8 638 aa15.06■□□□□ 0
NCSTN-212ENST00000469159 KIF13AQ9H1H9 1805 aa15.06■□□□□ 0
NCSTN-212ENST00000469159 CUX1P39880 1505 aa15.03■□□□□ -0
NCSTN-212ENST00000469159 PBRM1Q86U86 1689 aa15.03■□□□□ -0
NCSTN-212ENST00000469159 CEP170Q5SW79 1584 aa15.01□□□□□ -0.01
NCSTN-212ENST00000469159 GRIN2AQ12879 1464 aa14.98□□□□□ -0.01
NCSTN-212ENST00000469159 NUP160Q12769 1436 aa14.98□□□□□ -0.01
NCSTN-212ENST00000469159 FAM69CQ0P6D2 419 aa14.97□□□□□ -0.01
NCSTN-212ENST00000469159 CHIC1Q5VXU3 224 aa14.96□□□□□ -0.01
NCSTN-212ENST00000469159 ABCC10Q5T3U5 1492 aa14.95□□□□□ -0.02
NCSTN-212ENST00000469159 SHROOM2Q13796 1616 aa14.95□□□□□ -0.02
NCSTN-212ENST00000469159 ABCA5Q8WWZ7 1642 aa14.95□□□□□ -0.02
NCSTN-212ENST00000469159 ABCA10Q8WWZ4 1543 aa14.94□□□□□ -0.02
NCSTN-212ENST00000469159 KDM6BO15054 1643 aa14.88□□□□□ -0.03
NCSTN-212ENST00000469159 MAPKBP1O60336 1514 aa14.87□□□□□ -0.03
NCSTN-212ENST00000469159 ADAMTS12P58397 1594 aa14.87□□□□□ -0.03
NCSTN-212ENST00000469159 PRG4Q92954 1404 aaPredicted RBP14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms