RNA–Protein interactions for RNA: ENST00000468770.1

SNRPD3-205, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

TSL 1 (best)

Gene SNRPD3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-205ENST00000468770 CARMIL1Q5VZK9 1371 aa12.29□□□□□ -0.44
SNRPD3-205ENST00000468770 CUL7Q14999 1698 aa12.26□□□□□ -0.45
SNRPD3-205ENST00000468770 KIAA0586Q9BVV6 1533 aa12.25□□□□□ -0.45
SNRPD3-205ENST00000468770 RUSC2Q8N2Y8 1516 aa12.24□□□□□ -0.45
SNRPD3-205ENST00000468770 NPM1P06748 294 aaKnown RBP eCLIP12.2□□□□□ -0.46
SNRPD3-205ENST00000468770 TTBK1Q5TCY1 1321 aaPredicted RBP12.17□□□□□ -0.46
SNRPD3-205ENST00000468770 RAPGEF2Q9Y4G8 1499 aa12.17□□□□□ -0.46
SNRPD3-205ENST00000468770 CARMIL2Q6F5E8 1435 aa12.15□□□□□ -0.46
SNRPD3-205ENST00000468770 PTPRGP23470 1445 aa12.14□□□□□ -0.47
SNRPD3-205ENST00000468770 IQGAP2Q13576 1575 aa12.13□□□□□ -0.47
SNRPD3-205ENST00000468770 TNIKQ9UKE5 1360 aa12.12□□□□□ -0.47
SNRPD3-205ENST00000468770 FAM69CQ0P6D2 419 aa12.1□□□□□ -0.47
SNRPD3-205ENST00000468770 ADCY10Q96PN6 1610 aa12.08□□□□□ -0.48
SNRPD3-205ENST00000468770 CSRNP3Q8WYN3 585 aa12.07□□□□□ -0.48
SNRPD3-205ENST00000468770 DISP1Q96F81 1524 aa12.06□□□□□ -0.48
SNRPD3-205ENST00000468770 PRXQ9BXM0 1461 aa12.06□□□□□ -0.48
SNRPD3-205ENST00000468770 MAPKBP1O60336 1514 aa12.06□□□□□ -0.48
SNRPD3-205ENST00000468770 ABCC10Q5T3U5 1492 aa12.05□□□□□ -0.48
SNRPD3-205ENST00000468770 UGGT2Q9NYU1 1516 aa12.05□□□□□ -0.48
SNRPD3-205ENST00000468770 UACAQ9BZF9 1416 aa12.04□□□□□ -0.48
SNRPD3-205ENST00000468770 KIF13AQ9H1H9 1805 aa12.02□□□□□ -0.48
SNRPD3-205ENST00000468770 ABCC2Q92887 1545 aa12.01□□□□□ -0.49
SNRPD3-205ENST00000468770 FAM9AQ8IZU1 332 aaPredicted RBP12.01□□□□□ -0.49
SNRPD3-205ENST00000468770 UHRF1BP1LA0JNW5 1464 aa12.01□□□□□ -0.49
SNRPD3-205ENST00000468770 GOLGA3Q08378 1498 aa12.01□□□□□ -0.49
SNRPD3-205ENST00000468770 KIAA0556O60303 1618 aa12□□□□□ -0.49
SNRPD3-205ENST00000468770 CTTNBP2Q8WZ74 1663 aa12□□□□□ -0.49
SNRPD3-205ENST00000468770 EEA1Q15075 1411 aa11.99□□□□□ -0.49
SNRPD3-205ENST00000468770 DIP2BQ9P265 1576 aa11.99□□□□□ -0.49
SNRPD3-205ENST00000468770 ASXL2Q76L83 1435 aa11.98□□□□□ -0.49
SNRPD3-205ENST00000468770 PLB1Q6P1J6 1458 aa11.97□□□□□ -0.49
SNRPD3-205ENST00000468770 P3H3Q8IVL6 736 aa11.97□□□□□ -0.49
SNRPD3-205ENST00000468770 KDM5BQ9UGL1 1544 aa11.96□□□□□ -0.5
SNRPD3-205ENST00000468770 CHIC1Q5VXU3 224 aa11.95□□□□□ -0.5
SNRPD3-205ENST00000468770 RANGAP1P46060 587 aaPredicted RBP11.94□□□□□ -0.5
SNRPD3-205ENST00000468770 AEBP2Q6ZN18 517 aaPredicted RBP11.94□□□□□ -0.5
SNRPD3-205ENST00000468770 TSPOAP1O95153 1857 aa11.92□□□□□ -0.5
SNRPD3-205ENST00000468770 ZCCHC11Q5TAX3 1644 aaKnown RBP11.9□□□□□ -0.5
SNRPD3-205ENST00000468770 KCNH8Q96L42 1107 aa11.9□□□□□ -0.5
SNRPD3-205ENST00000468770 GLI2P10070 1586 aa11.89□□□□□ -0.51
SNRPD3-205ENST00000468770 ARID3CA6NKF2 412 aa11.89□□□□□ -0.51
SNRPD3-205ENST00000468770 EPRSP07814 1512 aaKnown RBP11.89□□□□□ -0.51
SNRPD3-205ENST00000468770 ABCA8O94911 1581 aa11.88□□□□□ -0.51
SNRPD3-205ENST00000468770 EHMT2Q96KQ7 1210 aa11.88□□□□□ -0.51
SNRPD3-205ENST00000468770 UBTFP17480 764 aaKnown RBP11.87□□□□□ -0.51
SNRPD3-205ENST00000468770 WDR7Q9Y4E6 1490 aa11.87□□□□□ -0.51
SNRPD3-205ENST00000468770 KDM6BO15054 1643 aa11.86□□□□□ -0.51
SNRPD3-205ENST00000468770 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.86□□□□□ -0.51
SNRPD3-205ENST00000468770 HNRNPUL2Q1KMD3 747 aaKnown RBP11.86□□□□□ -0.51
SNRPD3-205ENST00000468770 SAMD9Q5K651 1589 aa11.84□□□□□ -0.51
SNRPD3-205ENST00000468770 KIF21BO75037 1637 aa11.84□□□□□ -0.51
SNRPD3-205ENST00000468770 TEX14Q8IWB6 1497 aa11.83□□□□□ -0.52
SNRPD3-205ENST00000468770 ATP10BO94823 1461 aa11.83□□□□□ -0.52
SNRPD3-205ENST00000468770 FHOD3Q2V2M9 1422 aa11.82□□□□□ -0.52
SNRPD3-205ENST00000468770 CD109Q6YHK3 1445 aa11.82□□□□□ -0.52
SNRPD3-205ENST00000468770 MAP3K4Q9Y6R4 1608 aa11.82□□□□□ -0.52
SNRPD3-205ENST00000468770 PPRC1Q5VV67 1664 aaKnown RBP11.81□□□□□ -0.52
SNRPD3-205ENST00000468770 RAPGEF6Q8TEU7 1601 aa11.78□□□□□ -0.52
SNRPD3-205ENST00000468770 COL17A1Q9UMD9 1497 aaPredicted RBP11.78□□□□□ -0.52
SNRPD3-205ENST00000468770 PLEKHD1A6NEE1 506 aa11.78□□□□□ -0.52
SNRPD3-205ENST00000468770 EFCAB5A4FU69 1503 aa11.77□□□□□ -0.52
SNRPD3-205ENST00000468770 MAGI3Q5TCQ9 1506 aa11.76□□□□□ -0.53
SNRPD3-205ENST00000468770 CFAP43Q8NDM7 1665 aa11.76□□□□□ -0.53
SNRPD3-205ENST00000468770 NUP153P49790 1475 aaKnown RBP11.76□□□□□ -0.53
SNRPD3-205ENST00000468770 ATP1B4Q9UN42 357 aaPredicted RBP11.75□□□□□ -0.53
SNRPD3-205ENST00000468770 KDM4FA0A1W2PPD8 638 aa11.74□□□□□ -0.53
SNRPD3-205ENST00000468770 FMN1Q68DA7 1419 aa11.71□□□□□ -0.53
SNRPD3-205ENST00000468770 ARHGAP35Q9NRY4 1499 aa11.7□□□□□ -0.54
SNRPD3-205ENST00000468770 PHLDB1Q86UU1 1377 aa11.7□□□□□ -0.54
SNRPD3-205ENST00000468770 ABCA9Q8IUA7 1624 aa11.7□□□□□ -0.54
SNRPD3-205ENST00000468770 CDK11AQ9UQ88 783 aaPredicted RBP11.68□□□□□ -0.54
SNRPD3-205ENST00000468770 ARAP3Q8WWN8 1544 aa11.67□□□□□ -0.54
SNRPD3-205ENST00000468770 RAPGEF3O95398 923 aa11.67□□□□□ -0.54
SNRPD3-205ENST00000468770 NEO1Q92859 1461 aa11.66□□□□□ -0.54
SNRPD3-205ENST00000468770 CDK13Q14004 1512 aaKnown RBP11.65□□□□□ -0.54
SNRPD3-205ENST00000468770 ADGRL1O94910 1474 aa11.64□□□□□ -0.55
SNRPD3-205ENST00000468770 HECW1Q76N89 1606 aa11.64□□□□□ -0.55
SNRPD3-205ENST00000468770 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.63□□□□□ -0.553e-6■■■■□ 23.4
SNRPD3-205ENST00000468770 AKNAQ7Z591 1439 aa11.61□□□□□ -0.55
SNRPD3-205ENST00000468770 FANCAO15360 1455 aa11.61□□□□□ -0.55
SNRPD3-205ENST00000468770 CLIP1P30622 1438 aa11.6□□□□□ -0.55
SNRPD3-205ENST00000468770 DENND4BO75064 1496 aaPredicted RBP11.59□□□□□ -0.55
SNRPD3-205ENST00000468770 EFCAB2Q5VUJ9 269 aa11.59□□□□□ -0.55
SNRPD3-205ENST00000468770 PLCH2O75038 1416 aa11.59□□□□□ -0.55
SNRPD3-205ENST00000468770 CASKIN1Q8WXD9 1431 aa11.59□□□□□ -0.55
SNRPD3-205ENST00000468770 TTC37Q6PGP7 1564 aa11.58□□□□□ -0.55
SNRPD3-205ENST00000468770 TROQ12816 1431 aaPredicted RBP11.58□□□□□ -0.56
SNRPD3-205ENST00000468770 ARID4BQ4LE39 1312 aaPredicted RBP11.58□□□□□ -0.56
SNRPD3-205ENST00000468770 CFAP74Q9C0B2 1584 aa11.56□□□□□ -0.56
SNRPD3-205ENST00000468770 SCAPERQ9BY12 1400 aa11.55□□□□□ -0.56
SNRPD3-205ENST00000468770 CCDC18Q5T9S5 1454 aa11.55□□□□□ -0.56
SNRPD3-205ENST00000468770 PCF11O94913 1555 aaKnown RBP11.54□□□□□ -0.56
SNRPD3-205ENST00000468770 FRMPD1Q5SYB0 1578 aa11.54□□□□□ -0.56
SNRPD3-205ENST00000468770 KIF14Q15058 1648 aa11.53□□□□□ -0.56
SNRPD3-205ENST00000468770 LRRIQ1Q96JM4 1722 aa11.52□□□□□ -0.56
SNRPD3-205ENST00000468770 FYCO1Q9BQS8 1478 aa11.52□□□□□ -0.56
SNRPD3-205ENST00000468770 MYT1LQ9UL68 1186 aa11.51□□□□□ -0.57
SNRPD3-205ENST00000468770 RICTORQ6R327 1708 aa11.51□□□□□ -0.57
SNRPD3-205ENST00000468770 MYO5CQ9NQX4 1742 aa11.51□□□□□ -0.57
SNRPD3-205ENST00000468770 MAGI2Q86UL8 1455 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms