RNA–Protein interactions for RNA: ENST00000467996.1

RNF13-208, Transcript of ring finger protein 13, humanhuman

TSL 5

Gene RNF13, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13-208ENST00000467996 LOC105371045A0A1W2PR82 267 aa19.32■□□□□ 0.68
RNF13-208ENST00000467996 FBLN2P98095 1184 aa19.3■□□□□ 0.68
RNF13-208ENST00000467996 NUP160Q12769 1436 aa19.28■□□□□ 0.68
RNF13-208ENST00000467996 UBTFP17480 764 aaKnown RBP19.26■□□□□ 0.67
RNF13-208ENST00000467996 TNIKQ9UKE5 1360 aa19.25■□□□□ 0.67
RNF13-208ENST00000467996 IQGAP2Q13576 1575 aa19.24■□□□□ 0.67
RNF13-208ENST00000467996 CLASP1Q7Z460 1538 aa19.21■□□□□ 0.67
RNF13-208ENST00000467996 KIAA0586Q9BVV6 1533 aa19.21■□□□□ 0.67
RNF13-208ENST00000467996 DNAJC5Q9H3Z4 198 aa19.18■□□□□ 0.66
RNF13-208ENST00000467996 SHROOM2Q13796 1616 aa19.14■□□□□ 0.66
RNF13-208ENST00000467996 CEP162Q5TB80 1403 aa19.14■□□□□ 0.65
RNF13-208ENST00000467996 UGGT2Q9NYU1 1516 aa19.13■□□□□ 0.65
RNF13-208ENST00000467996 SAMD9Q5K651 1589 aa19.12■□□□□ 0.65
RNF13-208ENST00000467996 EFCAB5A4FU69 1503 aa19.1■□□□□ 0.65
RNF13-208ENST00000467996 OSCARQ8IYS5 282 aa19.08■□□□□ 0.64
RNF13-208ENST00000467996 CLIP1P30622 1438 aa19.08■□□□□ 0.64
RNF13-208ENST00000467996 KIAA0556O60303 1618 aa19.07■□□□□ 0.64
RNF13-208ENST00000467996 ARHGAP35Q9NRY4 1499 aa19.06■□□□□ 0.64
RNF13-208ENST00000467996 RANGAP1P46060 587 aaPredicted RBP19.06■□□□□ 0.64
RNF13-208ENST00000467996 DISP1Q96F81 1524 aa19.04■□□□□ 0.64
RNF13-208ENST00000467996 JPH4Q96JJ6 628 aa19.02■□□□□ 0.64
RNF13-208ENST00000467996 ARAP1Q96P48 1450 aa19■□□□□ 0.63
RNF13-208ENST00000467996 ERCC6L2Q5T890 1561 aa19■□□□□ 0.63
RNF13-208ENST00000467996 PRG4Q92954 1404 aaPredicted RBP18.99■□□□□ 0.63
RNF13-208ENST00000467996 FHOD3Q2V2M9 1422 aa18.97■□□□□ 0.63
RNF13-208ENST00000467996 CARMIL2Q6F5E8 1435 aa18.97■□□□□ 0.63
RNF13-208ENST00000467996 P3H3Q8IVL6 736 aa18.92■□□□□ 0.62
RNF13-208ENST00000467996 ARHGEF11O15085 1522 aa18.88■□□□□ 0.61
RNF13-208ENST00000467996 PCF11O94913 1555 aaKnown RBP18.88■□□□□ 0.61
RNF13-208ENST00000467996 RIMBP3CA6NJZ7 1639 aa18.87■□□□□ 0.61
RNF13-208ENST00000467996 RIMBP3BA6NNM3 1639 aa18.87■□□□□ 0.61
RNF13-208ENST00000467996 VPS8Q8N3P4 1428 aa18.87■□□□□ 0.61
RNF13-208ENST00000467996 RIMBP3Q9UFD9 1639 aa18.87■□□□□ 0.61
RNF13-208ENST00000467996 FMN1Q68DA7 1419 aa18.85■□□□□ 0.61
RNF13-208ENST00000467996 RAPGEF6Q8TEU7 1601 aa18.82■□□□□ 0.6
RNF13-208ENST00000467996 ABCA8O94911 1581 aa18.81■□□□□ 0.6
RNF13-208ENST00000467996 LRRIQ1Q96JM4 1722 aa18.8■□□□□ 0.6
RNF13-208ENST00000467996 HECW1Q76N89 1606 aa18.8■□□□□ 0.6
RNF13-208ENST00000467996 PTPRGP23470 1445 aa18.8■□□□□ 0.6
RNF13-208ENST00000467996 FYCO1Q9BQS8 1478 aa18.79■□□□□ 0.6
RNF13-208ENST00000467996 TTBK1Q5TCY1 1321 aaPredicted RBP18.78■□□□□ 0.6
RNF13-208ENST00000467996 PLB1Q6P1J6 1458 aa18.77■□□□□ 0.6
RNF13-208ENST00000467996 CASKIN1Q8WXD9 1431 aa18.77■□□□□ 0.6
RNF13-208ENST00000467996 CFAP43Q8NDM7 1665 aa18.74■□□□□ 0.59
RNF13-208ENST00000467996 ABCC2Q92887 1545 aa18.73■□□□□ 0.59
RNF13-208ENST00000467996 ADCY10Q96PN6 1610 aa18.72■□□□□ 0.59
RNF13-208ENST00000467996 UACAQ9BZF9 1416 aa18.72■□□□□ 0.59
RNF13-208ENST00000467996 NUP153P49790 1475 aaKnown RBP18.71■□□□□ 0.59
RNF13-208ENST00000467996 UHRF1BP1LA0JNW5 1464 aa18.7■□□□□ 0.58
RNF13-208ENST00000467996 TIAM1Q13009 1591 aa18.68■□□□□ 0.58
RNF13-208ENST00000467996 CCDC18Q5T9S5 1454 aa18.67■□□□□ 0.58
RNF13-208ENST00000467996 EPRSP07814 1512 aaKnown RBP18.67■□□□□ 0.58
RNF13-208ENST00000467996 CDK13Q14004 1512 aaKnown RBP18.66■□□□□ 0.58
RNF13-208ENST00000467996 ZCCHC11Q5TAX3 1644 aaKnown RBP18.66■□□□□ 0.58
RNF13-208ENST00000467996 MAP3K1Q13233 1512 aa18.64■□□□□ 0.58
RNF13-208ENST00000467996 ATP1B4Q9UN42 357 aaPredicted RBP18.64■□□□□ 0.57
RNF13-208ENST00000467996 FOXD1Q16676 465 aa18.61■□□□□ 0.57
RNF13-208ENST00000467996 KDM5BQ9UGL1 1544 aa18.6■□□□□ 0.57
RNF13-208ENST00000467996 ATP10BO94823 1461 aa18.59■□□□□ 0.57
RNF13-208ENST00000467996 ARID3CA6NKF2 412 aa18.58■□□□□ 0.56
RNF13-208ENST00000467996 CYB5RLQ6IPT4 315 aa18.57■□□□□ 0.56
RNF13-208ENST00000467996 MAGI3Q5TCQ9 1506 aa18.57■□□□□ 0.56
RNF13-208ENST00000467996 APLP2Q06481 763 aa18.56■□□□□ 0.56
RNF13-208ENST00000467996 EHBP1L1Q8N3D4 1523 aa18.54■□□□□ 0.56
RNF13-208ENST00000467996 LRRC9Q6ZRR7 1453 aa18.54■□□□□ 0.56
RNF13-208ENST00000467996 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.5■□□□□ 0.55
RNF13-208ENST00000467996 HNRNPUL2Q1KMD3 747 aaKnown RBP18.5■□□□□ 0.55
RNF13-208ENST00000467996 SUPT6HQ7KZ85 1726 aaKnown RBP18.49■□□□□ 0.55
RNF13-208ENST00000467996 KANK4Q5T7N3 995 aaPredicted RBP18.49■□□□□ 0.55
RNF13-208ENST00000467996 MTUS2Q5JR59 1369 aa18.48■□□□□ 0.55
RNF13-208ENST00000467996 TROQ12816 1431 aaPredicted RBP18.48■□□□□ 0.55
RNF13-208ENST00000467996 KIF14Q15058 1648 aa18.47■□□□□ 0.55
RNF13-208ENST00000467996 MAPKBP1O60336 1514 aa18.47■□□□□ 0.55
RNF13-208ENST00000467996 PPARGC1BQ86YN6 1023 aaKnown RBP18.45■□□□□ 0.54
RNF13-208ENST00000467996 CDK11AQ9UQ88 783 aaPredicted RBP18.45■□□□□ 0.54
RNF13-208ENST00000467996 WDR7Q9Y4E6 1490 aa18.45■□□□□ 0.54
RNF13-208ENST00000467996 ASXL2Q76L83 1435 aa18.44■□□□□ 0.54
RNF13-208ENST00000467996 NPM1P06748 294 aaKnown RBP eCLIP18.44■□□□□ 0.54
RNF13-208ENST00000467996 PLEKHD1A6NEE1 506 aa18.42■□□□□ 0.54
RNF13-208ENST00000467996 PLPPR3Q6T4P5 718 aa18.42■□□□□ 0.54
RNF13-208ENST00000467996 NCOA2Q15596 1464 aa18.39■□□□□ 0.54
RNF13-208ENST00000467996 TTC37Q6PGP7 1564 aa18.38■□□□□ 0.53
RNF13-208ENST00000467996 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.37■□□□□ 0.53
RNF13-208ENST00000467996 ITSN2Q9NZM3 1697 aa18.37■□□□□ 0.53
RNF13-208ENST00000467996 CDC42BPAQ5VT25 1732 aa18.37■□□□□ 0.53
RNF13-208ENST00000467996 MYO5CQ9NQX4 1742 aa18.35■□□□□ 0.53
RNF13-208ENST00000467996 ABCA9Q8IUA7 1624 aa18.35■□□□□ 0.53
RNF13-208ENST00000467996 ABCC10Q5T3U5 1492 aa18.35■□□□□ 0.53
RNF13-208ENST00000467996 DIP2BQ9P265 1576 aa18.34■□□□□ 0.53
RNF13-208ENST00000467996 PREX2Q70Z35 1606 aa18.33■□□□□ 0.52
RNF13-208ENST00000467996 PHLDB1Q86UU1 1377 aa18.32■□□□□ 0.52
RNF13-208ENST00000467996 KIF13AQ9H1H9 1805 aa18.32■□□□□ 0.52
RNF13-208ENST00000467996 CDC42BPBQ9Y5S2 1711 aa18.31■□□□□ 0.52
RNF13-208ENST00000467996 GLI2P10070 1586 aa18.3■□□□□ 0.52
RNF13-208ENST00000467996 KCNH8Q96L42 1107 aa18.3■□□□□ 0.52
RNF13-208ENST00000467996 MAP3K4Q9Y6R4 1608 aa18.29■□□□□ 0.52
RNF13-208ENST00000467996 MYOM3Q5VTT5 1437 aa18.29■□□□□ 0.52
RNF13-208ENST00000467996 CCNB3Q8WWL7 1395 aa18.28■□□□□ 0.52
RNF13-208ENST00000467996 GPATCH8Q9UKJ3 1502 aaKnown RBP18.27■□□□□ 0.51
RNF13-208ENST00000467996 FGD6Q6ZV73 1430 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms