RNA–Protein interactions for RNA: ENST00000467663.5

CTNS-205, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3

Gene CTNS, Length 590 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-205ENST00000467663 TRHP20396 242 aaPredicted RBP20.47■□□□□ 0.87
CTNS-205ENST00000467663 RUSC2Q8N2Y8 1516 aa20.47■□□□□ 0.87
CTNS-205ENST00000467663 CARMIL1Q5VZK9 1371 aa20.45■□□□□ 0.86
CTNS-205ENST00000467663 KIAA0586Q9BVV6 1533 aa20.43■□□□□ 0.86
CTNS-205ENST00000467663 RAPGEF2Q9Y4G8 1499 aa20.28■□□□□ 0.84
CTNS-205ENST00000467663 IQGAP2Q13576 1575 aa20.23■□□□□ 0.83
CTNS-205ENST00000467663 CARMIL2Q6F5E8 1435 aa20.21■□□□□ 0.83
CTNS-205ENST00000467663 PTPRGP23470 1445 aa20.19■□□□□ 0.82
CTNS-205ENST00000467663 NPM1P06748 294 aaKnown RBP eCLIP20.18■□□□□ 0.82
CTNS-205ENST00000467663 TNIKQ9UKE5 1360 aa20.18■□□□□ 0.82
CTNS-205ENST00000467663 ADCY10Q96PN6 1610 aa20.17■□□□□ 0.82
CTNS-205ENST00000467663 PRXQ9BXM0 1461 aa20.16■□□□□ 0.82
CTNS-205ENST00000467663 UGGT2Q9NYU1 1516 aa20.15■□□□□ 0.82
CTNS-205ENST00000467663 DISP1Q96F81 1524 aa20.14■□□□□ 0.81
CTNS-205ENST00000467663 CHIC1Q5VXU3 224 aa20.14■□□□□ 0.81
CTNS-205ENST00000467663 MAPKBP1O60336 1514 aa20.13■□□□□ 0.81
CTNS-205ENST00000467663 ABCC10Q5T3U5 1492 aa20.1■□□□□ 0.81
CTNS-205ENST00000467663 TTBK1Q5TCY1 1321 aaPredicted RBP20.08■□□□□ 0.81
CTNS-205ENST00000467663 KIF13AQ9H1H9 1805 aa20.07■□□□□ 0.8
CTNS-205ENST00000467663 CSRNP3Q8WYN3 585 aa20.06■□□□□ 0.8
CTNS-205ENST00000467663 UHRF1BP1LA0JNW5 1464 aa20.05■□□□□ 0.8
CTNS-205ENST00000467663 FAM69CQ0P6D2 419 aa20.05■□□□□ 0.8
CTNS-205ENST00000467663 ABCC2Q92887 1545 aa20.05■□□□□ 0.8
CTNS-205ENST00000467663 KIAA0556O60303 1618 aa20.05■□□□□ 0.8
CTNS-205ENST00000467663 CTTNBP2Q8WZ74 1663 aa20.04■□□□□ 0.8
CTNS-205ENST00000467663 UACAQ9BZF9 1416 aa20.04■□□□□ 0.8
CTNS-205ENST00000467663 EEA1Q15075 1411 aa20.02■□□□□ 0.79
CTNS-205ENST00000467663 DIP2BQ9P265 1576 aa20.01■□□□□ 0.79
CTNS-205ENST00000467663 GOLGA3Q08378 1498 aa20■□□□□ 0.79
CTNS-205ENST00000467663 KDM5BQ9UGL1 1544 aa19.96■□□□□ 0.79
CTNS-205ENST00000467663 PLB1Q6P1J6 1458 aa19.95■□□□□ 0.78
CTNS-205ENST00000467663 ASXL2Q76L83 1435 aa19.94■□□□□ 0.78
CTNS-205ENST00000467663 FAM9AQ8IZU1 332 aaPredicted RBP19.88■□□□□ 0.77
CTNS-205ENST00000467663 GLI2P10070 1586 aa19.87■□□□□ 0.77
CTNS-205ENST00000467663 ABCA8O94911 1581 aa19.87■□□□□ 0.77
CTNS-205ENST00000467663 ZCCHC11Q5TAX3 1644 aaKnown RBP19.86■□□□□ 0.77
CTNS-205ENST00000467663 EPRSP07814 1512 aaKnown RBP19.83■□□□□ 0.77
CTNS-205ENST00000467663 P3H3Q8IVL6 736 aa19.82■□□□□ 0.76
CTNS-205ENST00000467663 SAMD9Q5K651 1589 aa19.82■□□□□ 0.76
CTNS-205ENST00000467663 KIF21BO75037 1637 aa19.8■□□□□ 0.76
CTNS-205ENST00000467663 WDR7Q9Y4E6 1490 aa19.79■□□□□ 0.76
CTNS-205ENST00000467663 TSPOAP1O95153 1857 aa19.79■□□□□ 0.76
CTNS-205ENST00000467663 KDM6BO15054 1643 aa19.76■□□□□ 0.75
CTNS-205ENST00000467663 PPRC1Q5VV67 1664 aaKnown RBP19.75■□□□□ 0.75
CTNS-205ENST00000467663 MAP3K4Q9Y6R4 1608 aa19.74■□□□□ 0.75
CTNS-205ENST00000467663 ATP10BO94823 1461 aa19.72■□□□□ 0.75
CTNS-205ENST00000467663 RANGAP1P46060 587 aaPredicted RBP19.7■□□□□ 0.74
CTNS-205ENST00000467663 FHOD3Q2V2M9 1422 aa19.69■□□□□ 0.74
CTNS-205ENST00000467663 TEX14Q8IWB6 1497 aa19.69■□□□□ 0.74
CTNS-205ENST00000467663 KCNH8Q96L42 1107 aa19.68■□□□□ 0.74
CTNS-205ENST00000467663 RAPGEF6Q8TEU7 1601 aa19.68■□□□□ 0.74
CTNS-205ENST00000467663 EFCAB5A4FU69 1503 aa19.67■□□□□ 0.74
CTNS-205ENST00000467663 ARID3CA6NKF2 412 aa19.67■□□□□ 0.74
CTNS-205ENST00000467663 AEBP2Q6ZN18 517 aaPredicted RBP19.67■□□□□ 0.74
CTNS-205ENST00000467663 UBTFP17480 764 aaKnown RBP19.65■□□□□ 0.74
CTNS-205ENST00000467663 CD109Q6YHK3 1445 aa19.65■□□□□ 0.74
CTNS-205ENST00000467663 NUP153P49790 1475 aaKnown RBP19.64■□□□□ 0.73
CTNS-205ENST00000467663 COL17A1Q9UMD9 1497 aaPredicted RBP19.64■□□□□ 0.73
CTNS-205ENST00000467663 MAGI3Q5TCQ9 1506 aa19.64■□□□□ 0.73
CTNS-205ENST00000467663 CFAP43Q8NDM7 1665 aa19.62■□□□□ 0.73
CTNS-205ENST00000467663 EHMT2Q96KQ7 1210 aa19.61■□□□□ 0.73
CTNS-205ENST00000467663 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.58■□□□□ 0.72
CTNS-205ENST00000467663 HNRNPUL2Q1KMD3 747 aaKnown RBP19.58■□□□□ 0.72
CTNS-205ENST00000467663 ABCA9Q8IUA7 1624 aa19.54■□□□□ 0.72
CTNS-205ENST00000467663 ARHGAP35Q9NRY4 1499 aa19.54■□□□□ 0.72
CTNS-205ENST00000467663 PLEKHD1A6NEE1 506 aa19.53■□□□□ 0.72
CTNS-205ENST00000467663 FMN1Q68DA7 1419 aa19.51■□□□□ 0.71
CTNS-205ENST00000467663 KDM4FA0A1W2PPD8 638 aa19.51■□□□□ 0.71
CTNS-205ENST00000467663 PHLDB1Q86UU1 1377 aa19.49■□□□□ 0.71
CTNS-205ENST00000467663 ARAP3Q8WWN8 1544 aa19.48■□□□□ 0.71
CTNS-205ENST00000467663 NEO1Q92859 1461 aa19.44■□□□□ 0.7
CTNS-205ENST00000467663 CDK13Q14004 1512 aaKnown RBP19.44■□□□□ 0.7
CTNS-205ENST00000467663 HECW1Q76N89 1606 aa19.42■□□□□ 0.7
CTNS-205ENST00000467663 ATP1B4Q9UN42 357 aaPredicted RBP19.4■□□□□ 0.7
CTNS-205ENST00000467663 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.4■□□□□ 0.7
CTNS-205ENST00000467663 ADGRL1O94910 1474 aa19.38■□□□□ 0.69
CTNS-205ENST00000467663 CDK11AQ9UQ88 783 aaPredicted RBP19.37■□□□□ 0.69
CTNS-205ENST00000467663 RAPGEF3O95398 923 aa19.35■□□□□ 0.69
CTNS-205ENST00000467663 TTC37Q6PGP7 1564 aa19.35■□□□□ 0.69
CTNS-205ENST00000467663 FANCAO15360 1455 aa19.34■□□□□ 0.69
CTNS-205ENST00000467663 CASKIN1Q8WXD9 1431 aa19.34■□□□□ 0.69
CTNS-205ENST00000467663 AKNAQ7Z591 1439 aa19.33■□□□□ 0.68
CTNS-205ENST00000467663 CLIP1P30622 1438 aa19.32■□□□□ 0.68
CTNS-205ENST00000467663 PLCH2O75038 1416 aa19.31■□□□□ 0.68
CTNS-205ENST00000467663 TROQ12816 1431 aaPredicted RBP19.3■□□□□ 0.68
CTNS-205ENST00000467663 FRMPD1Q5SYB0 1578 aa19.3■□□□□ 0.68
CTNS-205ENST00000467663 CFAP74Q9C0B2 1584 aa19.3■□□□□ 0.68
CTNS-205ENST00000467663 DENND4BO75064 1496 aaPredicted RBP19.29■□□□□ 0.68
CTNS-205ENST00000467663 LRRIQ1Q96JM4 1722 aa19.28■□□□□ 0.68
CTNS-205ENST00000467663 PCF11O94913 1555 aaKnown RBP19.27■□□□□ 0.68
CTNS-205ENST00000467663 CCDC18Q5T9S5 1454 aa19.27■□□□□ 0.67
CTNS-205ENST00000467663 FYCO1Q9BQS8 1478 aa19.25■□□□□ 0.67
CTNS-205ENST00000467663 EFCAB2Q5VUJ9 269 aa19.24■□□□□ 0.67
CTNS-205ENST00000467663 KIF14Q15058 1648 aa19.24■□□□□ 0.67
CTNS-205ENST00000467663 RICTORQ6R327 1708 aa19.23■□□□□ 0.67
CTNS-205ENST00000467663 LOC105371045A0A1W2PR82 267 aa19.23■□□□□ 0.67
CTNS-205ENST00000467663 SCAPERQ9BY12 1400 aa19.21■□□□□ 0.67
CTNS-205ENST00000467663 MYO5CQ9NQX4 1742 aa19.2■□□□□ 0.66
CTNS-205ENST00000467663 ZMYM4Q5VZL5 1548 aa19.2■□□□□ 0.66
CTNS-205ENST00000467663 POGZQ7Z3K3 1410 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms