RNA–Protein interactions for RNA: ENST00000466780.5

PDZRN3-205, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-205ENST00000466780 LRRC9Q6ZRR7 1453 aa18.61■□□□□ 0.57
PDZRN3-205ENST00000466780 PHLDB1Q86UU1 1377 aa18.6■□□□□ 0.57
PDZRN3-205ENST00000466780 SIN3AQ96ST3 1273 aa18.58■□□□□ 0.57
PDZRN3-205ENST00000466780 DDX10Q13206 875 aaKnown RBP18.57■□□□□ 0.56
PDZRN3-205ENST00000466780 CARMIL1Q5VZK9 1371 aa18.55■□□□□ 0.56
PDZRN3-205ENST00000466780 PRDM2Q13029 1718 aa18.54■□□□□ 0.56
PDZRN3-205ENST00000466780 PPP1R15AO75807 674 aaPredicted RBP18.53■□□□□ 0.56
PDZRN3-205ENST00000466780 CC2D2AQ9P2K1 1620 aa18.53■□□□□ 0.56
PDZRN3-205ENST00000466780 FAM50AQ14320 339 aaKnown RBP18.52■□□□□ 0.56
PDZRN3-205ENST00000466780 CFAP43Q8NDM7 1665 aa18.51■□□□□ 0.55
PDZRN3-205ENST00000466780 FGD5Q6ZNL6 1462 aa18.51■□□□□ 0.55
PDZRN3-205ENST00000466780 BCANQ96GW7 911 aa18.51■□□□□ 0.55
PDZRN3-205ENST00000466780 PCF11O94913 1555 aaKnown RBP18.49■□□□□ 0.55
PDZRN3-205ENST00000466780 FHAD1B1AJZ9 1412 aa18.48■□□□□ 0.55
PDZRN3-205ENST00000466780 FKBP8Q14318 412 aa18.48■□□□□ 0.55
PDZRN3-205ENST00000466780 ANP32EQ9BTT0 268 aa18.47■□□□□ 0.55
PDZRN3-205ENST00000466780 TIMELESSQ9UNS1 1208 aa18.47■□□□□ 0.55
PDZRN3-205ENST00000466780 FANCD2Q9BXW9 1451 aa18.45■□□□□ 0.54
PDZRN3-205ENST00000466780 P3H3Q8IVL6 736 aa18.44■□□□□ 0.54
PDZRN3-205ENST00000466780 HIRIP3Q9BW71 556 aaPredicted RBP18.44■□□□□ 0.54
PDZRN3-205ENST00000466780 CCER2I3L3R5 266 aa18.41■□□□□ 0.54
PDZRN3-205ENST00000466780 FHOD3Q2V2M9 1422 aa18.39■□□□□ 0.53
PDZRN3-205ENST00000466780 ATP1B4Q9UN42 357 aaPredicted RBP18.38■□□□□ 0.53
PDZRN3-205ENST00000466780 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.38■□□□□ 0.53
PDZRN3-205ENST00000466780 FYCO1Q9BQS8 1478 aa18.37■□□□□ 0.53
PDZRN3-205ENST00000466780 TRIM52Q96A61 297 aa18.36■□□□□ 0.53
PDZRN3-205ENST00000466780 RAD54L2Q9Y4B4 1467 aa18.36■□□□□ 0.53
PDZRN3-205ENST00000466780 NESP48681 1621 aa18.36■□□□□ 0.53
PDZRN3-205ENST00000466780 ANP32CO43423 234 aa18.35■□□□□ 0.53
PDZRN3-205ENST00000466780 CASKIN1Q8WXD9 1431 aa18.34■□□□□ 0.53
PDZRN3-205ENST00000466780 NEFLP07196 543 aa18.32■□□□□ 0.52
PDZRN3-205ENST00000466780 AQRO60306 1485 aaKnown RBP eCLIP18.32■□□□□ 0.52
PDZRN3-205ENST00000466780 EFCAB5A4FU69 1503 aa18.32■□□□□ 0.52
PDZRN3-205ENST00000466780 FGD6Q6ZV73 1430 aa18.31■□□□□ 0.52
PDZRN3-205ENST00000466780 DNMBPQ6XZF7 1577 aa18.3■□□□□ 0.52
PDZRN3-205ENST00000466780 TOPBP1Q92547 1522 aa18.3■□□□□ 0.52
PDZRN3-205ENST00000466780 POLA1P09884 1462 aaPredicted RBP18.29■□□□□ 0.52
PDZRN3-205ENST00000466780 CCDC18Q5T9S5 1454 aa18.29■□□□□ 0.52
PDZRN3-205ENST00000466780 TONSLQ96HA7 1378 aa18.29■□□□□ 0.52
PDZRN3-205ENST00000466780 RBM19Q9Y4C8 960 aaKnown RBP18.29■□□□□ 0.52
PDZRN3-205ENST00000466780 PTPRKQ15262 1439 aa18.28■□□□□ 0.52
PDZRN3-205ENST00000466780 ABCA10Q8WWZ4 1543 aa18.26■□□□□ 0.51
PDZRN3-205ENST00000466780 HFM1A2PYH4 1435 aa18.25■□□□□ 0.51
PDZRN3-205ENST00000466780 UACAQ9BZF9 1416 aa18.25■□□□□ 0.51
PDZRN3-205ENST00000466780 SNAPC4Q5SXM2 1469 aa18.24■□□□□ 0.51
PDZRN3-205ENST00000466780 PTPN23Q9H3S7 1636 aa18.24■□□□□ 0.51
PDZRN3-205ENST00000466780 CTTNBP2Q8WZ74 1663 aa18.23■□□□□ 0.51
PDZRN3-205ENST00000466780 KDM5BQ9UGL1 1544 aa18.22■□□□□ 0.51
PDZRN3-205ENST00000466780 FMN1Q68DA7 1419 aa18.21■□□□□ 0.51
PDZRN3-205ENST00000466780 CUL7Q14999 1698 aa18.2■□□□□ 0.5
PDZRN3-205ENST00000466780 NAIPQ13075 1403 aa18.19■□□□□ 0.5
PDZRN3-205ENST00000466780 MTUS2Q5JR59 1369 aa18.19■□□□□ 0.5
PDZRN3-205ENST00000466780 LRRIQ1Q96JM4 1722 aa18.17■□□□□ 0.5
PDZRN3-205ENST00000466780 TDRD9Q8NDG6 1382 aaKnown RBP18.17■□□□□ 0.5
PDZRN3-205ENST00000466780 DNAJC5BQ9UF47 199 aa18.17■□□□□ 0.5
PDZRN3-205ENST00000466780 URB2Q14146 1524 aaKnown RBP18.16■□□□□ 0.5
PDZRN3-205ENST00000466780 NCOA2Q15596 1464 aa18.15■□□□□ 0.5
PDZRN3-205ENST00000466780 MYOM3Q5VTT5 1437 aa18.14■□□□□ 0.5
PDZRN3-205ENST00000466780 LAMC3Q9Y6N6 1575 aa18.14■□□□□ 0.49
PDZRN3-205ENST00000466780 HNRNPUQ00839 825 aaKnown RBP eCLIP18.12■□□□□ 0.49
PDZRN3-205ENST00000466780 SAMD9Q5K651 1589 aa18.12■□□□□ 0.49
PDZRN3-205ENST00000466780 GRIN2BQ13224 1484 aa18.11■□□□□ 0.49
PDZRN3-205ENST00000466780 MSH5O43196 834 aa18.1■□□□□ 0.49
PDZRN3-205ENST00000466780 WASHC2AQ641Q2 1341 aa18.09■□□□□ 0.49
PDZRN3-205ENST00000466780 PDS5BQ9NTI5 1447 aa18.09■□□□□ 0.49
PDZRN3-205ENST00000466780 SUPT6HQ7KZ85 1726 aaKnown RBP18.08■□□□□ 0.48
PDZRN3-205ENST00000466780 HSPA5P11021 654 aaKnown RBP18.08■□□□□ 0.48
PDZRN3-205ENST00000466780 DENND4BO75064 1496 aaPredicted RBP18.08■□□□□ 0.48
PDZRN3-205ENST00000466780 IRX6P78412 446 aaPredicted RBP18.07■□□□□ 0.48
PDZRN3-205ENST00000466780 GAPVD1Q14C86 1478 aa18.07■□□□□ 0.48
PDZRN3-205ENST00000466780 EHBP1L1Q8N3D4 1523 aa18.06■□□□□ 0.48
PDZRN3-205ENST00000466780 THOC2Q8NI27 1593 aaKnown RBP18.06■□□□□ 0.48
PDZRN3-205ENST00000466780 BCL11AQ9H165 835 aa18.06■□□□□ 0.48
PDZRN3-205ENST00000466780 UGGT2Q9NYU1 1516 aa18.05■□□□□ 0.48
PDZRN3-205ENST00000466780 ARHGEF11O15085 1522 aa18.05■□□□□ 0.48
PDZRN3-205ENST00000466780 MAGI3Q5TCQ9 1506 aa18.04■□□□□ 0.48
PDZRN3-205ENST00000466780 RRP7BPQ9NSQ0 103 aa18.03■□□□□ 0.48
PDZRN3-205ENST00000466780 HECW1Q76N89 1606 aa18.02■□□□□ 0.47
PDZRN3-205ENST00000466780 CCDC184Q52MB2 194 aa18.01■□□□□ 0.47
PDZRN3-205ENST00000466780 GCC2Q8IWJ2 1684 aa18.01■□□□□ 0.47
PDZRN3-205ENST00000466780 ABCA5Q8WWZ7 1642 aa18■□□□□ 0.47
PDZRN3-205ENST00000466780 FANCIQ9NVI1 1328 aa18■□□□□ 0.47
PDZRN3-205ENST00000466780 CHIC2Q9UKJ5 165 aa18■□□□□ 0.47
PDZRN3-205ENST00000466780 KDM6BO15054 1643 aa18■□□□□ 0.47
PDZRN3-205ENST00000466780 TCOF1Q13428 1488 aaKnown RBP18■□□□□ 0.47
PDZRN3-205ENST00000466780 CNTLNQ9NXG0 1405 aa17.99■□□□□ 0.47
PDZRN3-205ENST00000466780 EIF4G2P78344 907 aaKnown RBP eCLIP17.99■□□□□ 0.47
PDZRN3-205ENST00000466780 CDK11AQ9UQ88 783 aaPredicted RBP17.99■□□□□ 0.47
PDZRN3-205ENST00000466780 KIF21AQ7Z4S6 1674 aa17.98■□□□□ 0.47
PDZRN3-205ENST00000466780 C11orf95C9JLR9 678 aaPredicted RBP17.96■□□□□ 0.47
PDZRN3-205ENST00000466780 AKNAQ7Z591 1439 aa17.96■□□□□ 0.46
PDZRN3-205ENST00000466780 ERICH6BQ5W0A0 696 aa17.95■□□□□ 0.46
PDZRN3-205ENST00000466780 L3MBTL2Q969R5 705 aa17.94■□□□□ 0.46
PDZRN3-205ENST00000466780 NCOA1Q15788 1441 aa17.93■□□□□ 0.46
PDZRN3-205ENST00000466780 MPHOSPH9Q99550 1183 aa17.93■□□□□ 0.46
PDZRN3-205ENST00000466780 CCDC7Q96M83 1385 aa17.93■□□□□ 0.46
PDZRN3-205ENST00000466780 PRKRIP1Q9H875 184 aaPredicted RBP17.92■□□□□ 0.46
PDZRN3-205ENST00000466780 PPP4R2Q9NY27 417 aa17.92■□□□□ 0.46
PDZRN3-205ENST00000466780 FOXD1Q16676 465 aa17.9■□□□□ 0.46
PDZRN3-205ENST00000466780 FAM9BQ8IZU0 186 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms