RNA–Protein interactions for RNA: ENST00000466243.1

SLC6A8-207, Transcript of solute carrier family 6 member 8, humanhuman

TSL 2

Gene SLC6A8, Length 544 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A8-207ENST00000466243 SHROOM2Q13796 1616 aa23.2■■□□□ 1.3
SLC6A8-207ENST00000466243 TRHP20396 242 aaPredicted RBP23.19■■□□□ 1.3
SLC6A8-207ENST00000466243 RUSC2Q8N2Y8 1516 aa23.18■■□□□ 1.3
SLC6A8-207ENST00000466243 KIAA0586Q9BVV6 1533 aa23.18■■□□□ 1.3
SLC6A8-207ENST00000466243 RAPGEF2Q9Y4G8 1499 aa23.1■■□□□ 1.29
SLC6A8-207ENST00000466243 CARMIL2Q6F5E8 1435 aa22.98■■□□□ 1.27
SLC6A8-207ENST00000466243 TTBK1Q5TCY1 1321 aaPredicted RBP22.97■■□□□ 1.27
SLC6A8-207ENST00000466243 IQGAP2Q13576 1575 aa22.97■■□□□ 1.27
SLC6A8-207ENST00000466243 PRXQ9BXM0 1461 aa22.95■■□□□ 1.26
SLC6A8-207ENST00000466243 PTPRGP23470 1445 aa22.94■■□□□ 1.26
SLC6A8-207ENST00000466243 NPM1P06748 294 aaKnown RBP eCLIP22.94■■□□□ 1.26
SLC6A8-207ENST00000466243 CSRNP3Q8WYN3 585 aa22.93■■□□□ 1.26
SLC6A8-207ENST00000466243 TNIKQ9UKE5 1360 aa22.92■■□□□ 1.26
SLC6A8-207ENST00000466243 EEA1Q15075 1411 aa22.86■■□□□ 1.25
SLC6A8-207ENST00000466243 DISP1Q96F81 1524 aa22.86■■□□□ 1.25
SLC6A8-207ENST00000466243 UGGT2Q9NYU1 1516 aa22.86■■□□□ 1.25
SLC6A8-207ENST00000466243 CHIC1Q5VXU3 224 aa22.85■■□□□ 1.25
SLC6A8-207ENST00000466243 FAM9AQ8IZU1 332 aaPredicted RBP22.85■■□□□ 1.25
SLC6A8-207ENST00000466243 ADCY10Q96PN6 1610 aa22.81■■□□□ 1.24
SLC6A8-207ENST00000466243 UACAQ9BZF9 1416 aa22.76■■□□□ 1.23
SLC6A8-207ENST00000466243 FAM69CQ0P6D2 419 aa22.75■■□□□ 1.23
SLC6A8-207ENST00000466243 KIAA0556O60303 1618 aa22.75■■□□□ 1.23
SLC6A8-207ENST00000466243 GOLGA3Q08378 1498 aa22.74■■□□□ 1.23
SLC6A8-207ENST00000466243 MAPKBP1O60336 1514 aa22.74■■□□□ 1.23
SLC6A8-207ENST00000466243 ABCC2Q92887 1545 aa22.72■■□□□ 1.23
SLC6A8-207ENST00000466243 UHRF1BP1LA0JNW5 1464 aa22.71■■□□□ 1.23
SLC6A8-207ENST00000466243 ABCC10Q5T3U5 1492 aa22.71■■□□□ 1.23
SLC6A8-207ENST00000466243 CTTNBP2Q8WZ74 1663 aa22.7■■□□□ 1.22
SLC6A8-207ENST00000466243 P3H3Q8IVL6 736 aa22.66■■□□□ 1.22
SLC6A8-207ENST00000466243 RANGAP1P46060 587 aaPredicted RBP22.63■■□□□ 1.21
SLC6A8-207ENST00000466243 PLB1Q6P1J6 1458 aa22.62■■□□□ 1.21
SLC6A8-207ENST00000466243 ASXL2Q76L83 1435 aa22.62■■□□□ 1.21
SLC6A8-207ENST00000466243 EHMT2Q96KQ7 1210 aa22.6■■□□□ 1.21
SLC6A8-207ENST00000466243 KDM5BQ9UGL1 1544 aa22.6■■□□□ 1.21
SLC6A8-207ENST00000466243 DIP2BQ9P265 1576 aa22.59■■□□□ 1.21
SLC6A8-207ENST00000466243 KIF21BO75037 1637 aa22.56■■□□□ 1.2
SLC6A8-207ENST00000466243 KIF13AQ9H1H9 1805 aa22.54■■□□□ 1.2
SLC6A8-207ENST00000466243 UBTFP17480 764 aaKnown RBP22.54■■□□□ 1.2
SLC6A8-207ENST00000466243 ABCA8O94911 1581 aa22.52■■□□□ 1.2
SLC6A8-207ENST00000466243 ARID3CA6NKF2 412 aa22.49■■□□□ 1.19
SLC6A8-207ENST00000466243 SAMD9Q5K651 1589 aa22.49■■□□□ 1.19
SLC6A8-207ENST00000466243 ZCCHC11Q5TAX3 1644 aaKnown RBP22.48■■□□□ 1.19
SLC6A8-207ENST00000466243 FHOD3Q2V2M9 1422 aa22.47■■□□□ 1.19
SLC6A8-207ENST00000466243 EPRSP07814 1512 aaKnown RBP22.47■■□□□ 1.19
SLC6A8-207ENST00000466243 WDR7Q9Y4E6 1490 aa22.46■■□□□ 1.19
SLC6A8-207ENST00000466243 GLI2P10070 1586 aa22.44■■□□□ 1.18
SLC6A8-207ENST00000466243 KCNH8Q96L42 1107 aa22.42■■□□□ 1.18
SLC6A8-207ENST00000466243 ATP10BO94823 1461 aa22.4■■□□□ 1.18
SLC6A8-207ENST00000466243 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.39■■□□□ 1.17
SLC6A8-207ENST00000466243 HNRNPUL2Q1KMD3 747 aaKnown RBP22.39■■□□□ 1.17
SLC6A8-207ENST00000466243 EFCAB5A4FU69 1503 aa22.39■■□□□ 1.17
SLC6A8-207ENST00000466243 RAPGEF6Q8TEU7 1601 aa22.34■■□□□ 1.17
SLC6A8-207ENST00000466243 NUP153P49790 1475 aaKnown RBP22.32■■□□□ 1.16
SLC6A8-207ENST00000466243 TSPOAP1O95153 1857 aa22.32■■□□□ 1.16
SLC6A8-207ENST00000466243 KDM6BO15054 1643 aa22.31■■□□□ 1.16
SLC6A8-207ENST00000466243 TEX14Q8IWB6 1497 aa22.31■■□□□ 1.16
SLC6A8-207ENST00000466243 CD109Q6YHK3 1445 aa22.31■■□□□ 1.16
SLC6A8-207ENST00000466243 ARHGAP35Q9NRY4 1499 aa22.28■■□□□ 1.16
SLC6A8-207ENST00000466243 MAP3K4Q9Y6R4 1608 aa22.28■■□□□ 1.16
SLC6A8-207ENST00000466243 FMN1Q68DA7 1419 aa22.25■■□□□ 1.15
SLC6A8-207ENST00000466243 ATP1B4Q9UN42 357 aaPredicted RBP22.25■■□□□ 1.15
SLC6A8-207ENST00000466243 PPRC1Q5VV67 1664 aaKnown RBP22.25■■□□□ 1.15
SLC6A8-207ENST00000466243 PLEKHD1A6NEE1 506 aa22.24■■□□□ 1.15
SLC6A8-207ENST00000466243 MAGI3Q5TCQ9 1506 aa22.22■■□□□ 1.15
SLC6A8-207ENST00000466243 AEBP2Q6ZN18 517 aaPredicted RBP22.21■■□□□ 1.15
SLC6A8-207ENST00000466243 COL17A1Q9UMD9 1497 aaPredicted RBP22.21■■□□□ 1.15
SLC6A8-207ENST00000466243 CFAP43Q8NDM7 1665 aa22.16■■□□□ 1.14
SLC6A8-207ENST00000466243 CDK13Q14004 1512 aaKnown RBP22.13■■□□□ 1.13
SLC6A8-207ENST00000466243 ABCA9Q8IUA7 1624 aa22.11■■□□□ 1.13
SLC6A8-207ENST00000466243 CLIP1P30622 1438 aa22.11■■□□□ 1.13
SLC6A8-207ENST00000466243 CDK11AQ9UQ88 783 aaPredicted RBP22.1■■□□□ 1.13
SLC6A8-207ENST00000466243 HECW1Q76N89 1606 aa22.09■■□□□ 1.13
SLC6A8-207ENST00000466243 PHLDB1Q86UU1 1377 aa22.07■■□□□ 1.12
SLC6A8-207ENST00000466243 CASKIN1Q8WXD9 1431 aa22.04■■□□□ 1.12
SLC6A8-207ENST00000466243 NEO1Q92859 1461 aa22.03■■□□□ 1.12
SLC6A8-207ENST00000466243 ARAP3Q8WWN8 1544 aa22.03■■□□□ 1.12
SLC6A8-207ENST00000466243 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.01■■□□□ 1.111e-38■□□□□ 10.7
SLC6A8-207ENST00000466243 KDM4FA0A1W2PPD8 638 aa22.01■■□□□ 1.11
SLC6A8-207ENST00000466243 RAPGEF3O95398 923 aa22■■□□□ 1.11
SLC6A8-207ENST00000466243 TROQ12816 1431 aaPredicted RBP21.98■■□□□ 1.11
SLC6A8-207ENST00000466243 PCF11O94913 1555 aaKnown RBP21.97■■□□□ 1.11
SLC6A8-207ENST00000466243 FANCAO15360 1455 aa21.96■■□□□ 1.11
SLC6A8-207ENST00000466243 CCDC18Q5T9S5 1454 aa21.96■■□□□ 1.11
SLC6A8-207ENST00000466243 TTC37Q6PGP7 1564 aa21.95■■□□□ 1.11
SLC6A8-207ENST00000466243 CEP162Q5TB80 1403 aa21.95■■□□□ 1.1
SLC6A8-207ENST00000466243 AKNAQ7Z591 1439 aa21.95■■□□□ 1.1
SLC6A8-207ENST00000466243 FYCO1Q9BQS8 1478 aa21.95■■□□□ 1.1
SLC6A8-207ENST00000466243 LOC105371045A0A1W2PR82 267 aa21.94■■□□□ 1.1
SLC6A8-207ENST00000466243 PLCH2O75038 1416 aa21.94■■□□□ 1.1
SLC6A8-207ENST00000466243 DENND4BO75064 1496 aaPredicted RBP21.9■■□□□ 1.1
SLC6A8-207ENST00000466243 EFCAB2Q5VUJ9 269 aa21.9■■□□□ 1.1
SLC6A8-207ENST00000466243 ADGRL1O94910 1474 aa21.9■■□□□ 1.1
SLC6A8-207ENST00000466243 KIF14Q15058 1648 aa21.88■■□□□ 1.09
SLC6A8-207ENST00000466243 CFAP74Q9C0B2 1584 aa21.86■■□□□ 1.09
SLC6A8-207ENST00000466243 SCAPERQ9BY12 1400 aa21.84■■□□□ 1.09
SLC6A8-207ENST00000466243 LRRIQ1Q96JM4 1722 aa21.82■■□□□ 1.08
SLC6A8-207ENST00000466243 FRMPD1Q5SYB0 1578 aa21.82■■□□□ 1.08
SLC6A8-207ENST00000466243 ARHGAP5Q13017 1502 aa21.8■■□□□ 1.08
SLC6A8-207ENST00000466243 MTUS2Q5JR59 1369 aa21.78■■□□□ 1.08
SLC6A8-207ENST00000466243 POGZQ7Z3K3 1410 aa21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 6.6 ms