RNA–Protein interactions for RNA: ENST00000465705.3

TMCO1-204, Transcript of transmembrane and coiled-coil domains 1, humanhuman

TSL 5

Gene TMCO1, Length 760 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO1-204ENST00000465705 SYNJ2O15056 1496 aa19.03■□□□□ 0.64
TMCO1-204ENST00000465705 ADAMTS12P58397 1594 aa19.03■□□□□ 0.64
TMCO1-204ENST00000465705 FBLN2P98095 1184 aa19.03■□□□□ 0.64
TMCO1-204ENST00000465705 CHMP7Q8WUX9 453 aaPredicted RBP19■□□□□ 0.63
TMCO1-204ENST00000465705 OSCARQ8IYS5 282 aa18.99■□□□□ 0.63
TMCO1-204ENST00000465705 FHAD1B1AJZ9 1412 aa18.99■□□□□ 0.63
TMCO1-204ENST00000465705 CUL7Q14999 1698 aa18.96■□□□□ 0.63
TMCO1-204ENST00000465705 IGF1RP08069 1367 aa18.95■□□□□ 0.62
TMCO1-204ENST00000465705 RUSC2Q8N2Y8 1516 aa18.95■□□□□ 0.62
TMCO1-204ENST00000465705 GRIN2AQ12879 1464 aa18.94■□□□□ 0.62
TMCO1-204ENST00000465705 CARMIL1Q5VZK9 1371 aa18.87■□□□□ 0.61
TMCO1-204ENST00000465705 EEA1Q15075 1411 aa18.86■□□□□ 0.61
TMCO1-204ENST00000465705 CLASP1Q7Z460 1538 aa18.84■□□□□ 0.61
TMCO1-204ENST00000465705 NUP160Q12769 1436 aa18.83■□□□□ 0.61
TMCO1-204ENST00000465705 CEP170Q5SW79 1584 aa18.83■□□□□ 0.6
TMCO1-204ENST00000465705 RAPGEF2Q9Y4G8 1499 aa18.79■□□□□ 0.6
TMCO1-204ENST00000465705 FAM9AQ8IZU1 332 aaPredicted RBP18.77■□□□□ 0.6
TMCO1-204ENST00000465705 CSRNP3Q8WYN3 585 aa18.77■□□□□ 0.6
TMCO1-204ENST00000465705 PRXQ9BXM0 1461 aa18.76■□□□□ 0.59
TMCO1-204ENST00000465705 ARHGEF11O15085 1522 aa18.71■□□□□ 0.59
TMCO1-204ENST00000465705 KIAA0586Q9BVV6 1533 aa18.69■□□□□ 0.58
TMCO1-204ENST00000465705 RIMBP3CA6NJZ7 1639 aa18.69■□□□□ 0.58
TMCO1-204ENST00000465705 RIMBP3BA6NNM3 1639 aa18.69■□□□□ 0.58
TMCO1-204ENST00000465705 RIMBP3Q9UFD9 1639 aa18.69■□□□□ 0.58
TMCO1-204ENST00000465705 SHROOM2Q13796 1616 aa18.67■□□□□ 0.58
TMCO1-204ENST00000465705 KIF21BO75037 1637 aa18.66■□□□□ 0.58
TMCO1-204ENST00000465705 IQGAP2Q13576 1575 aa18.64■□□□□ 0.58
TMCO1-204ENST00000465705 CTTNBP2Q8WZ74 1663 aa18.63■□□□□ 0.57
TMCO1-204ENST00000465705 JPH4Q96JJ6 628 aa18.62■□□□□ 0.57
TMCO1-204ENST00000465705 PRG4Q92954 1404 aaPredicted RBP18.59■□□□□ 0.57
TMCO1-204ENST00000465705 ERCC6L2Q5T890 1561 aa18.58■□□□□ 0.56
TMCO1-204ENST00000465705 ARAP1Q96P48 1450 aa18.57■□□□□ 0.56
TMCO1-204ENST00000465705 GOLGA3Q08378 1498 aa18.56■□□□□ 0.56
TMCO1-204ENST00000465705 UGGT2Q9NYU1 1516 aa18.53■□□□□ 0.56
TMCO1-204ENST00000465705 EHMT2Q96KQ7 1210 aa18.52■□□□□ 0.56
TMCO1-204ENST00000465705 CARMIL2Q6F5E8 1435 aa18.51■□□□□ 0.55
TMCO1-204ENST00000465705 CYB5RLQ6IPT4 315 aa18.5■□□□□ 0.55
TMCO1-204ENST00000465705 RNF39Q9H2S5 420 aa18.49■□□□□ 0.55
TMCO1-204ENST00000465705 UBTFP17480 764 aaKnown RBP18.48■□□□□ 0.55
TMCO1-204ENST00000465705 DISP1Q96F81 1524 aa18.47■□□□□ 0.55
TMCO1-204ENST00000465705 KIAA0556O60303 1618 aa18.46■□□□□ 0.55
TMCO1-204ENST00000465705 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.44■□□□□ 0.542e-6■■■■□ 19.5
TMCO1-204ENST00000465705 TNIKQ9UKE5 1360 aa18.42■□□□□ 0.54
TMCO1-204ENST00000465705 PTPRGP23470 1445 aa18.4■□□□□ 0.54
TMCO1-204ENST00000465705 RANGAP1P46060 587 aaPredicted RBP18.39■□□□□ 0.53
TMCO1-204ENST00000465705 SAMD9Q5K651 1589 aa18.38■□□□□ 0.53
TMCO1-204ENST00000465705 TTBK1Q5TCY1 1321 aaPredicted RBP18.38■□□□□ 0.53
TMCO1-204ENST00000465705 EFCAB5A4FU69 1503 aa18.36■□□□□ 0.53
TMCO1-204ENST00000465705 CACNB1Q02641 598 aaPredicted RBP18.33■□□□□ 0.52
TMCO1-204ENST00000465705 P3H3Q8IVL6 736 aa18.32■□□□□ 0.52
TMCO1-204ENST00000465705 ADCY10Q96PN6 1610 aa18.3■□□□□ 0.52
TMCO1-204ENST00000465705 FHOD3Q2V2M9 1422 aa18.29■□□□□ 0.52
TMCO1-204ENST00000465705 UACAQ9BZF9 1416 aa18.28■□□□□ 0.52
TMCO1-204ENST00000465705 ABCC2Q92887 1545 aa18.26■□□□□ 0.51
TMCO1-204ENST00000465705 ARHGAP35Q9NRY4 1499 aa18.26■□□□□ 0.51
TMCO1-204ENST00000465705 UHRF1BP1LA0JNW5 1464 aa18.25■□□□□ 0.51
TMCO1-204ENST00000465705 PLB1Q6P1J6 1458 aa18.25■□□□□ 0.51
TMCO1-204ENST00000465705 ABCA8O94911 1581 aa18.23■□□□□ 0.51
TMCO1-204ENST00000465705 LOC105371045A0A1W2PR82 267 aa18.23■□□□□ 0.51
TMCO1-204ENST00000465705 CLIP1P30622 1438 aa18.23■□□□□ 0.51
TMCO1-204ENST00000465705 NPM1P06748 294 aaKnown RBP eCLIP18.22■□□□□ 0.51
TMCO1-204ENST00000465705 C1QBPQ07021 282 aaKnown RBP18.2■□□□□ 0.5
TMCO1-204ENST00000465705 CEP162Q5TB80 1403 aa18.19■□□□□ 0.5
TMCO1-204ENST00000465705 RAPGEF6Q8TEU7 1601 aa18.19■□□□□ 0.5
TMCO1-204ENST00000465705 FMN1Q68DA7 1419 aa18.18■□□□□ 0.5
TMCO1-204ENST00000465705 SLC4A2P04920 1241 aa18.18■□□□□ 0.5
TMCO1-204ENST00000465705 KDM5BQ9UGL1 1544 aa18.16■□□□□ 0.5
TMCO1-204ENST00000465705 MAPKBP1O60336 1514 aa18.15■□□□□ 0.5
TMCO1-204ENST00000465705 ZCCHC11Q5TAX3 1644 aaKnown RBP18.15■□□□□ 0.5
TMCO1-204ENST00000465705 SLC4A1APQ9BWU0 796 aaKnown RBP18.14■□□□□ 0.49
TMCO1-204ENST00000465705 U3KPZ7 1027 aaPredicted RBP18.11■□□□□ 0.49
TMCO1-204ENST00000465705 NUP153P49790 1475 aaKnown RBP18.1■□□□□ 0.49
TMCO1-204ENST00000465705 HECW1Q76N89 1606 aa18.09■□□□□ 0.49
TMCO1-204ENST00000465705 TRHP20396 242 aaPredicted RBP18.09■□□□□ 0.49
TMCO1-204ENST00000465705 ASXL2Q76L83 1435 aa18.08■□□□□ 0.49
TMCO1-204ENST00000465705 ARID3CA6NKF2 412 aa18.08■□□□□ 0.48
TMCO1-204ENST00000465705 PCF11O94913 1555 aaKnown RBP18.07■□□□□ 0.48
TMCO1-204ENST00000465705 ATP10BO94823 1461 aa18.07■□□□□ 0.48
TMCO1-204ENST00000465705 ATP1B4Q9UN42 357 aaPredicted RBP18.04■□□□□ 0.48
TMCO1-204ENST00000465705 CASKIN1Q8WXD9 1431 aa18.04■□□□□ 0.48
TMCO1-204ENST00000465705 ABCC10Q5T3U5 1492 aa18.03■□□□□ 0.48
TMCO1-204ENST00000465705 WDR7Q9Y4E6 1490 aa18.03■□□□□ 0.48
TMCO1-204ENST00000465705 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.03■□□□□ 0.48
TMCO1-204ENST00000465705 HNRNPUL2Q1KMD3 747 aaKnown RBP18.03■□□□□ 0.48
TMCO1-204ENST00000465705 DIP2BQ9P265 1576 aa18.03■□□□□ 0.48
TMCO1-204ENST00000465705 FYCO1Q9BQS8 1478 aa18.02■□□□□ 0.48
TMCO1-204ENST00000465705 EPRSP07814 1512 aaKnown RBP18.01■□□□□ 0.47
TMCO1-204ENST00000465705 CDK13Q14004 1512 aaKnown RBP18.01■□□□□ 0.47
TMCO1-204ENST00000465705 KIF13AQ9H1H9 1805 aa18■□□□□ 0.47
TMCO1-204ENST00000465705 FAM69CQ0P6D2 419 aa17.98■□□□□ 0.47
TMCO1-204ENST00000465705 CCDC18Q5T9S5 1454 aa17.97■□□□□ 0.47
TMCO1-204ENST00000465705 LRRIQ1Q96JM4 1722 aa17.96■□□□□ 0.47
TMCO1-204ENST00000465705 VPS8Q8N3P4 1428 aa17.96■□□□□ 0.47
TMCO1-204ENST00000465705 GLI2P10070 1586 aa17.95■□□□□ 0.46
TMCO1-204ENST00000465705 PLEKHD1A6NEE1 506 aa17.93■□□□□ 0.46
TMCO1-204ENST00000465705 KCNH8Q96L42 1107 aa17.92■□□□□ 0.46
TMCO1-204ENST00000465705 CDK11AQ9UQ88 783 aaPredicted RBP17.91■□□□□ 0.46
TMCO1-204ENST00000465705 MAP3K4Q9Y6R4 1608 aa17.88■□□□□ 0.45
TMCO1-204ENST00000465705 CFAP43Q8NDM7 1665 aa17.87■□□□□ 0.45
TMCO1-204ENST00000465705 TROQ12816 1431 aaPredicted RBP17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms