RNA–Protein interactions for RNA: ENST00000465421.5

SIK3-207, Transcript of SIK family kinase 3, humanhuman

TSL 2

Gene SIK3, Length 3,459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-207ENST00000465421 MAP3K1Q13233 1512 aa9.45□□□□□ -0.9
SIK3-207ENST00000465421 ABCA10Q8WWZ4 1543 aa9.44□□□□□ -0.9
SIK3-207ENST00000465421 FGD5Q6ZNL6 1462 aa9.44□□□□□ -0.9
SIK3-207ENST00000465421 KIF21AQ7Z4S6 1674 aa9.43□□□□□ -0.9
SIK3-207ENST00000465421 ABCA5Q8WWZ7 1642 aa9.42□□□□□ -0.9
SIK3-207ENST00000465421 CTTNBP2Q8WZ74 1663 aa9.42□□□□□ -0.9
SIK3-207ENST00000465421 CFAP43Q8NDM7 1665 aa9.42□□□□□ -0.9
SIK3-207ENST00000465421 UBTFP17480 764 aaKnown RBP9.41□□□□□ -0.9
SIK3-207ENST00000465421 NESP48681 1621 aa9.41□□□□□ -0.9
SIK3-207ENST00000465421 TOPBP1Q92547 1522 aa9.41□□□□□ -0.9
SIK3-207ENST00000465421 ARHGAP35Q9NRY4 1499 aa9.39□□□□□ -0.91
SIK3-207ENST00000465421 MRC2Q9UBG0 1479 aa9.39□□□□□ -0.91
SIK3-207ENST00000465421 IGF1RP08069 1367 aa9.38□□□□□ -0.91
SIK3-207ENST00000465421 WDR62O43379 1518 aa9.38□□□□□ -0.91
SIK3-207ENST00000465421 CUX2O14529 1486 aa9.37□□□□□ -0.91
SIK3-207ENST00000465421 EFCAB5A4FU69 1503 aa9.37□□□□□ -0.91
SIK3-207ENST00000465421 PLPPR3Q6T4P5 718 aa9.36□□□□□ -0.91
SIK3-207ENST00000465421 POLA1P09884 1462 aaPredicted RBP9.36□□□□□ -0.91
SIK3-207ENST00000465421 BCANQ96GW7 911 aa9.36□□□□□ -0.91
SIK3-207ENST00000465421 THOC2Q8NI27 1593 aaKnown RBP9.35□□□□□ -0.91
SIK3-207ENST00000465421 DHX57Q6P158 1386 aaKnown RBP9.35□□□□□ -0.91
SIK3-207ENST00000465421 URB2Q14146 1524 aaKnown RBP9.35□□□□□ -0.91
SIK3-207ENST00000465421 RRBP1Q9P2E9 1410 aaKnown RBP9.35□□□□□ -0.91
SIK3-207ENST00000465421 TARBP1Q13395 1621 aaKnown RBP9.34□□□□□ -0.91
SIK3-207ENST00000465421 TIAM1Q13009 1591 aa9.34□□□□□ -0.91
SIK3-207ENST00000465421 SAMD9Q5K651 1589 aa9.34□□□□□ -0.92
SIK3-207ENST00000465421 AQRO60306 1485 aaKnown RBP eCLIP9.33□□□□□ -0.92
SIK3-207ENST00000465421 ERCC6Q03468 1493 aa9.32□□□□□ -0.92
SIK3-207ENST00000465421 RBM19Q9Y4C8 960 aaKnown RBP9.32□□□□□ -0.92
SIK3-207ENST00000465421 PBRM1Q86U86 1689 aa9.31□□□□□ -0.92
SIK3-207ENST00000465421 CARMIL1Q5VZK9 1371 aa9.29□□□□□ -0.92
SIK3-207ENST00000465421 PCF11O94913 1555 aaKnown RBP9.28□□□□□ -0.92
SIK3-207ENST00000465421 MSH5O43196 834 aa9.28□□□□□ -0.92
SIK3-207ENST00000465421 KCNH8Q96L42 1107 aa9.28□□□□□ -0.92
SIK3-207ENST00000465421 IFT140Q96RY7 1462 aa9.28□□□□□ -0.92
SIK3-207ENST00000465421 FYCO1Q9BQS8 1478 aa9.27□□□□□ -0.93
SIK3-207ENST00000465421 LRRIQ1Q96JM4 1722 aa9.27□□□□□ -0.93
SIK3-207ENST00000465421 ARXQ96QS3 562 aa9.27□□□□□ -0.93
SIK3-207ENST00000465421 RAD54L2Q9Y4B4 1467 aa9.26□□□□□ -0.93
SIK3-207ENST00000465421 FKBP8Q14318 412 aa9.26□□□□□ -0.93
SIK3-207ENST00000465421 RTN4Q9NQC3 1192 aaKnown RBP9.25□□□□□ -0.93
SIK3-207ENST00000465421 FHAD1B1AJZ9 1412 aa9.24□□□□□ -0.93
SIK3-207ENST00000465421 ADAMTS12P58397 1594 aa9.24□□□□□ -0.93
SIK3-207ENST00000465421 SNAPC4Q5SXM2 1469 aa9.23□□□□□ -0.93
SIK3-207ENST00000465421 LRRC9Q6ZRR7 1453 aa9.23□□□□□ -0.93
SIK3-207ENST00000465421 CASKIN1Q8WXD9 1431 aa9.22□□□□□ -0.93
SIK3-207ENST00000465421 ITGAEP38570 1179 aa9.22□□□□□ -0.93
SIK3-207ENST00000465421 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.21□□□□□ -0.93
SIK3-207ENST00000465421 FANCIQ9NVI1 1328 aa9.21□□□□□ -0.93
SIK3-207ENST00000465421 GAPVD1Q14C86 1478 aa9.2□□□□□ -0.94
SIK3-207ENST00000465421 ARHGEF11O15085 1522 aa9.19□□□□□ -0.94
SIK3-207ENST00000465421 MAPKBP1O60336 1514 aa9.19□□□□□ -0.94
SIK3-207ENST00000465421 GRIN2BQ13224 1484 aa9.18□□□□□ -0.94
SIK3-207ENST00000465421 CCNB3Q8WWL7 1395 aa9.16□□□□□ -0.94
SIK3-207ENST00000465421 EIF4G3O43432 1585 aaKnown RBP9.16□□□□□ -0.94
SIK3-207ENST00000465421 EIF5BO60841 1220 aaKnown RBP9.15□□□□□ -0.94
SIK3-207ENST00000465421 KANK4Q5T7N3 995 aaPredicted RBP9.15□□□□□ -0.94
SIK3-207ENST00000465421 UGGT2Q9NYU1 1516 aa9.15□□□□□ -0.94
SIK3-207ENST00000465421 FMN1Q68DA7 1419 aa9.15□□□□□ -0.94
SIK3-207ENST00000465421 PPP1R15AO75807 674 aaPredicted RBP9.14□□□□□ -0.95
SIK3-207ENST00000465421 MAGI1Q96QZ7 1491 aaPredicted RBP9.14□□□□□ -0.95
SIK3-207ENST00000465421 EHBP1L1Q8N3D4 1523 aa9.14□□□□□ -0.95
SIK3-207ENST00000465421 IQGAP2Q13576 1575 aa9.13□□□□□ -0.95
SIK3-207ENST00000465421 NEFLP07196 543 aa9.13□□□□□ -0.95
SIK3-207ENST00000465421 HECW1Q76N89 1606 aa9.13□□□□□ -0.95
SIK3-207ENST00000465421 MYT1LQ9UL68 1186 aa9.13□□□□□ -0.95
SIK3-207ENST00000465421 SUPT6HQ7KZ85 1726 aaKnown RBP9.13□□□□□ -0.95
SIK3-207ENST00000465421 CCER2I3L3R5 266 aa9.12□□□□□ -0.95
SIK3-207ENST00000465421 HIRIP3Q9BW71 556 aaPredicted RBP9.11□□□□□ -0.95
SIK3-207ENST00000465421 CCDC18Q5T9S5 1454 aa9.11□□□□□ -0.95
SIK3-207ENST00000465421 FHOD3Q2V2M9 1422 aa9.11□□□□□ -0.95
SIK3-207ENST00000465421 GCC2Q8IWJ2 1684 aa9.1□□□□□ -0.95
SIK3-207ENST00000465421 PHLDB1Q86UU1 1377 aa9.1□□□□□ -0.95
SIK3-207ENST00000465421 TCOF1Q13428 1488 aaKnown RBP9.1□□□□□ -0.95
SIK3-207ENST00000465421 DDX10Q13206 875 aaKnown RBP9.09□□□□□ -0.95
SIK3-207ENST00000465421 TRIM52Q96A61 297 aa9.08□□□□□ -0.96
SIK3-207ENST00000465421 KIAA0556O60303 1618 aa9.08□□□□□ -0.96
SIK3-207ENST00000465421 DEKP35659 375 aaKnown RBP9.07□□□□□ -0.96
SIK3-207ENST00000465421 RAB3GAP2Q9H2M9 1393 aa9.07□□□□□ -0.96
SIK3-207ENST00000465421 MAGI3Q5TCQ9 1506 aa9.07□□□□□ -0.96
SIK3-207ENST00000465421 ADCY10Q96PN6 1610 aa9.07□□□□□ -0.96
SIK3-207ENST00000465421 ZNF608Q9ULD9 1512 aaPredicted RBP9.06□□□□□ -0.96
SIK3-207ENST00000465421 TDRD9Q8NDG6 1382 aaKnown RBP9.06□□□□□ -0.96
SIK3-207ENST00000465421 SYNJ2O15056 1496 aa9.06□□□□□ -0.96
SIK3-207ENST00000465421 IRX6P78412 446 aaPredicted RBP9.05□□□□□ -0.96
SIK3-207ENST00000465421 FGD6Q6ZV73 1430 aa9.05□□□□□ -0.96
SIK3-207ENST00000465421 PTPN23Q9H3S7 1636 aa9.05□□□□□ -0.96
SIK3-207ENST00000465421 AKNAQ7Z591 1439 aa9.05□□□□□ -0.96
SIK3-207ENST00000465421 SETD5Q9C0A6 1442 aa9.05□□□□□ -0.96
SIK3-207ENST00000465421 UBE2Q2Q8WVN8 375 aa9.04□□□□□ -0.96
SIK3-207ENST00000465421 CDK11AQ9UQ88 783 aaPredicted RBP9.04□□□□□ -0.96
SIK3-207ENST00000465421 KIAA0586Q9BVV6 1533 aa9.03□□□□□ -0.96
SIK3-207ENST00000465421 DISP1Q96F81 1524 aa9.03□□□□□ -0.96
SIK3-207ENST00000465421 GRIN2AQ12879 1464 aa9.02□□□□□ -0.96
SIK3-207ENST00000465421 NCOA2Q15596 1464 aa9.02□□□□□ -0.96
SIK3-207ENST00000465421 RAPGEF6Q8TEU7 1601 aa9.02□□□□□ -0.97
SIK3-207ENST00000465421 ERICH6BQ5W0A0 696 aa9.02□□□□□ -0.97
SIK3-207ENST00000465421 MYOM3Q5VTT5 1437 aa9.02□□□□□ -0.97
SIK3-207ENST00000465421 TIMELESSQ9UNS1 1208 aa9.01□□□□□ -0.97
SIK3-207ENST00000465421 CEP170Q5SW79 1584 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms