RNA–Protein interactions for RNA: ENST00000465224.5

CNNM3-203, Transcript of cyclin and CBS domain divalent metal cation transport mediator 3, humanhuman

TSL 1 (best)

Gene CNNM3, Length 2,607 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNNM3-203ENST00000465224 ITGAEP38570 1179 aa14.49□□□□□ -0.09
CNNM3-203ENST00000465224 FGD5Q6ZNL6 1462 aa14.49□□□□□ -0.09
CNNM3-203ENST00000465224 CLSPNQ9HAW4 1339 aa14.49□□□□□ -0.09
CNNM3-203ENST00000465224 CARMIL1Q5VZK9 1371 aa14.48□□□□□ -0.09
CNNM3-203ENST00000465224 CCNB3Q8WWL7 1395 aa14.48□□□□□ -0.09
CNNM3-203ENST00000465224 TSHZ2Q9NRE2 1034 aa14.46□□□□□ -0.09
CNNM3-203ENST00000465224 PDS5BQ9NTI5 1447 aa14.43□□□□□ -0.1
CNNM3-203ENST00000465224 KIF21AQ7Z4S6 1674 aa14.43□□□□□ -0.1
CNNM3-203ENST00000465224 P3H3Q8IVL6 736 aa14.42□□□□□ -0.1
CNNM3-203ENST00000465224 TIAM1Q13009 1591 aa14.4□□□□□ -0.1
CNNM3-203ENST00000465224 DNMBPQ6XZF7 1577 aa14.39□□□□□ -0.11
CNNM3-203ENST00000465224 RAD54L2Q9Y4B4 1467 aa14.38□□□□□ -0.11
CNNM3-203ENST00000465224 ANO8Q9HCE9 1232 aaPredicted RBP14.38□□□□□ -0.11
CNNM3-203ENST00000465224 RAB3GAP2Q9H2M9 1393 aa14.38□□□□□ -0.11
CNNM3-203ENST00000465224 TOPBP1Q92547 1522 aa14.38□□□□□ -0.11
CNNM3-203ENST00000465224 PHLDB1Q86UU1 1377 aa14.37□□□□□ -0.11
CNNM3-203ENST00000465224 LRRC9Q6ZRR7 1453 aa14.37□□□□□ -0.11
CNNM3-203ENST00000465224 MAP3K1Q13233 1512 aa14.36□□□□□ -0.11
CNNM3-203ENST00000465224 URB2Q14146 1524 aaKnown RBP14.36□□□□□ -0.11
CNNM3-203ENST00000465224 ATP1B4Q9UN42 357 aaPredicted RBP14.35□□□□□ -0.11
CNNM3-203ENST00000465224 SUPT16HQ9Y5B9 1047 aaKnown RBP14.34□□□□□ -0.11
CNNM3-203ENST00000465224 MAPKBP1O60336 1514 aa14.32□□□□□ -0.12
CNNM3-203ENST00000465224 FAM50AQ14320 339 aaKnown RBP14.32□□□□□ -0.12
CNNM3-203ENST00000465224 POLA1P09884 1462 aaPredicted RBP14.32□□□□□ -0.12
CNNM3-203ENST00000465224 FHOD3Q2V2M9 1422 aa14.32□□□□□ -0.12
CNNM3-203ENST00000465224 PCF11O94913 1555 aaKnown RBP14.31□□□□□ -0.12
CNNM3-203ENST00000465224 FHAD1B1AJZ9 1412 aa14.3□□□□□ -0.12
CNNM3-203ENST00000465224 ABCA10Q8WWZ4 1543 aa14.3□□□□□ -0.12
CNNM3-203ENST00000465224 SETD5Q9C0A6 1442 aa14.3□□□□□ -0.12
CNNM3-203ENST00000465224 EIF5BO60841 1220 aaKnown RBP14.27□□□□□ -0.13
CNNM3-203ENST00000465224 SIN3AQ96ST3 1273 aa14.27□□□□□ -0.13
CNNM3-203ENST00000465224 CFAP43Q8NDM7 1665 aa14.26□□□□□ -0.13
CNNM3-203ENST00000465224 ERCC6Q03468 1493 aa14.25□□□□□ -0.13
CNNM3-203ENST00000465224 MRC2Q9UBG0 1479 aa14.25□□□□□ -0.13
CNNM3-203ENST00000465224 CASKIN1Q8WXD9 1431 aa14.22□□□□□ -0.13
CNNM3-203ENST00000465224 FYCO1Q9BQS8 1478 aa14.22□□□□□ -0.13
CNNM3-203ENST00000465224 TDRD9Q8NDG6 1382 aaKnown RBP14.21□□□□□ -0.14
CNNM3-203ENST00000465224 KCNH8Q96L42 1107 aa14.2□□□□□ -0.14
CNNM3-203ENST00000465224 EFCAB5A4FU69 1503 aa14.2□□□□□ -0.14
CNNM3-203ENST00000465224 UBE2Q2Q8WVN8 375 aa14.19□□□□□ -0.14
CNNM3-203ENST00000465224 WDR97A6NE52 1622 aa14.19□□□□□ -0.14
CNNM3-203ENST00000465224 CUL7Q14999 1698 aa14.19□□□□□ -0.14
CNNM3-203ENST00000465224 CTTNBP2Q8WZ74 1663 aa14.18□□□□□ -0.14
CNNM3-203ENST00000465224 AQRO60306 1485 aaKnown RBP eCLIP14.18□□□□□ -0.148e-7■■■□□ 16.1
CNNM3-203ENST00000465224 WDR62O43379 1518 aa14.17□□□□□ -0.14
CNNM3-203ENST00000465224 TARBP1Q13395 1621 aaKnown RBP14.15□□□□□ -0.14
CNNM3-203ENST00000465224 SNAPC4Q5SXM2 1469 aa14.15□□□□□ -0.14
CNNM3-203ENST00000465224 DAXXQ9UER7 740 aaPredicted RBP14.14□□□□□ -0.15
CNNM3-203ENST00000465224 THOC2Q8NI27 1593 aaKnown RBP14.14□□□□□ -0.15
CNNM3-203ENST00000465224 FMN1Q68DA7 1419 aa14.14□□□□□ -0.15
CNNM3-203ENST00000465224 HIRIP3Q9BW71 556 aaPredicted RBP14.13□□□□□ -0.15
CNNM3-203ENST00000465224 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.13□□□□□ -0.15
CNNM3-203ENST00000465224 FGD6Q6ZV73 1430 aa14.13□□□□□ -0.15
CNNM3-203ENST00000465224 DDX10Q13206 875 aaKnown RBP14.12□□□□□ -0.15
CNNM3-203ENST00000465224 PTPRKQ15262 1439 aa14.12□□□□□ -0.15
CNNM3-203ENST00000465224 ABCA5Q8WWZ7 1642 aa14.12□□□□□ -0.15
CNNM3-203ENST00000465224 GAPVD1Q14C86 1478 aa14.12□□□□□ -0.15
CNNM3-203ENST00000465224 MTUS2Q5JR59 1369 aa14.11□□□□□ -0.15
CNNM3-203ENST00000465224 LRRIQ1Q96JM4 1722 aa14.11□□□□□ -0.15
CNNM3-203ENST00000465224 PPP1R15AO75807 674 aaPredicted RBP14.1□□□□□ -0.15
CNNM3-203ENST00000465224 SAMD9Q5K651 1589 aa14.09□□□□□ -0.15
CNNM3-203ENST00000465224 SALL2Q9Y467 1007 aaPredicted RBP14.09□□□□□ -0.15
CNNM3-203ENST00000465224 TIMELESSQ9UNS1 1208 aa14.07□□□□□ -0.16
CNNM3-203ENST00000465224 GRIN2BQ13224 1484 aa14.07□□□□□ -0.16
CNNM3-203ENST00000465224 IFT140Q96RY7 1462 aa14.07□□□□□ -0.16
CNNM3-203ENST00000465224 CCDC136Q96JN2 1154 aa14.07□□□□□ -0.16
CNNM3-203ENST00000465224 NCOA2Q15596 1464 aa14.06□□□□□ -0.16
CNNM3-203ENST00000465224 ZNF608Q9ULD9 1512 aaPredicted RBP14.05□□□□□ -0.16
CNNM3-203ENST00000465224 CCDC18Q5T9S5 1454 aa14.05□□□□□ -0.16
CNNM3-203ENST00000465224 RBM19Q9Y4C8 960 aaKnown RBP14.05□□□□□ -0.16
CNNM3-203ENST00000465224 PBRM1Q86U86 1689 aa14.05□□□□□ -0.16
CNNM3-203ENST00000465224 PLEKHG5O94827 1062 aa14.04□□□□□ -0.16
CNNM3-203ENST00000465224 HFM1A2PYH4 1435 aa14.04□□□□□ -0.16
CNNM3-203ENST00000465224 MSH5O43196 834 aa14.04□□□□□ -0.16
CNNM3-203ENST00000465224 MYOM3Q5VTT5 1437 aa14.03□□□□□ -0.16
CNNM3-203ENST00000465224 PTPN23Q9H3S7 1636 aa14.02□□□□□ -0.16
CNNM3-203ENST00000465224 NAIPQ13075 1403 aa14.02□□□□□ -0.17
CNNM3-203ENST00000465224 MAGI3Q5TCQ9 1506 aa14.02□□□□□ -0.17
CNNM3-203ENST00000465224 UACAQ9BZF9 1416 aa14.01□□□□□ -0.17
CNNM3-203ENST00000465224 TONSLQ96HA7 1378 aa13.99□□□□□ -0.17
CNNM3-203ENST00000465224 EIF4G3O43432 1585 aaKnown RBP13.99□□□□□ -0.17
CNNM3-203ENST00000465224 RRP7BPQ9NSQ0 103 aa13.98□□□□□ -0.17
CNNM3-203ENST00000465224 CHIC2Q9UKJ5 165 aa13.98□□□□□ -0.17
CNNM3-203ENST00000465224 SUPT6HQ7KZ85 1726 aaKnown RBP13.98□□□□□ -0.17
CNNM3-203ENST00000465224 UGGT2Q9NYU1 1516 aa13.97□□□□□ -0.17
CNNM3-203ENST00000465224 EHBP1L1Q8N3D4 1523 aa13.97□□□□□ -0.17
CNNM3-203ENST00000465224 ARID3CA6NKF2 412 aa13.97□□□□□ -0.17
CNNM3-203ENST00000465224 ARHGEF11O15085 1522 aa13.96□□□□□ -0.17
CNNM3-203ENST00000465224 ADAMTS12P58397 1594 aa13.94□□□□□ -0.18
CNNM3-203ENST00000465224 BCANQ96GW7 911 aa13.94□□□□□ -0.18
CNNM3-203ENST00000465224 KDM5BQ9UGL1 1544 aa13.93□□□□□ -0.18
CNNM3-203ENST00000465224 CDK13Q14004 1512 aaKnown RBP13.92□□□□□ -0.18
CNNM3-203ENST00000465224 ANP32CO43423 234 aa13.92□□□□□ -0.18
CNNM3-203ENST00000465224 DENND4BO75064 1496 aaPredicted RBP13.91□□□□□ -0.18
CNNM3-203ENST00000465224 EPRSP07814 1512 aaKnown RBP13.91□□□□□ -0.18
CNNM3-203ENST00000465224 PKNOX2Q96KN3 472 aa13.91□□□□□ -0.18
CNNM3-203ENST00000465224 IQGAP2Q13576 1575 aa13.9□□□□□ -0.18
CNNM3-203ENST00000465224 KDM6BO15054 1643 aa13.9□□□□□ -0.18
CNNM3-203ENST00000465224 TCOF1Q13428 1488 aaKnown RBP13.9□□□□□ -0.18
CNNM3-203ENST00000465224 CCER2I3L3R5 266 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms