RNA–Protein interactions for RNA: ENST00000464290.5

CRAT-208, Transcript of carnitine O-acetyltransferase, humanhuman

TSL 3

Gene CRAT, Length 867 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-208ENST00000464290 CEP170Q5SW79 1584 aa24.62■■□□□ 1.53
CRAT-208ENST00000464290 CTTNBP2Q8WZ74 1663 aa24.58■■□□□ 1.53
CRAT-208ENST00000464290 KIAA0586Q9BVV6 1533 aa24.56■■□□□ 1.52
CRAT-208ENST00000464290 RANGAP1P46060 587 aaPredicted RBP24.52■■□□□ 1.52
CRAT-208ENST00000464290 CEP162Q5TB80 1403 aa24.52■■□□□ 1.52
CRAT-208ENST00000464290 IQGAP2Q13576 1575 aa24.5■■□□□ 1.51
CRAT-208ENST00000464290 CLIP1P30622 1438 aa24.46■■□□□ 1.51
CRAT-208ENST00000464290 OSCARQ8IYS5 282 aa24.46■■□□□ 1.51
CRAT-208ENST00000464290 CLASP1Q7Z460 1538 aa24.44■■□□□ 1.5
CRAT-208ENST00000464290 JPH4Q96JJ6 628 aa24.43■■□□□ 1.5
CRAT-208ENST00000464290 UGGT2Q9NYU1 1516 aa24.41■■□□□ 1.5
CRAT-208ENST00000464290 ARHGAP35Q9NRY4 1499 aa24.39■■□□□ 1.5
CRAT-208ENST00000464290 P3H3Q8IVL6 736 aa24.35■■□□□ 1.49
CRAT-208ENST00000464290 SAMD9Q5K651 1589 aa24.34■■□□□ 1.49
CRAT-208ENST00000464290 EFCAB5A4FU69 1503 aa24.34■■□□□ 1.49
CRAT-208ENST00000464290 SHROOM2Q13796 1616 aa24.33■■□□□ 1.49
CRAT-208ENST00000464290 DISP1Q96F81 1524 aa24.33■■□□□ 1.49
CRAT-208ENST00000464290 ARAP1Q96P48 1450 aa24.31■■□□□ 1.48
CRAT-208ENST00000464290 PRG4Q92954 1404 aaPredicted RBP24.29■■□□□ 1.48
CRAT-208ENST00000464290 FHOD3Q2V2M9 1422 aa24.28■■□□□ 1.48
CRAT-208ENST00000464290 KIAA0556O60303 1618 aa24.27■■□□□ 1.48
CRAT-208ENST00000464290 CARMIL2Q6F5E8 1435 aa24.25■■□□□ 1.47
CRAT-208ENST00000464290 ERCC6L2Q5T890 1561 aa24.23■■□□□ 1.47
CRAT-208ENST00000464290 VPS8Q8N3P4 1428 aa24.17■■□□□ 1.46
CRAT-208ENST00000464290 TTBK1Q5TCY1 1321 aaPredicted RBP24.13■■□□□ 1.45
CRAT-208ENST00000464290 FMN1Q68DA7 1419 aa24.12■■□□□ 1.45
CRAT-208ENST00000464290 PTPRGP23470 1445 aa24.1■■□□□ 1.45
CRAT-208ENST00000464290 CASKIN1Q8WXD9 1431 aa24.04■■□□□ 1.44
CRAT-208ENST00000464290 ARHGEF11O15085 1522 aa24.04■■□□□ 1.44
CRAT-208ENST00000464290 PCF11O94913 1555 aaKnown RBP24.03■■□□□ 1.44
CRAT-208ENST00000464290 PLB1Q6P1J6 1458 aa24■■□□□ 1.43
CRAT-208ENST00000464290 ATP1B4Q9UN42 357 aaPredicted RBP23.99■■□□□ 1.43
CRAT-208ENST00000464290 FYCO1Q9BQS8 1478 aa23.99■■□□□ 1.43
CRAT-208ENST00000464290 ABCA8O94911 1581 aa23.98■■□□□ 1.43
CRAT-208ENST00000464290 RIMBP3CA6NJZ7 1639 aa23.96■■□□□ 1.43
CRAT-208ENST00000464290 RIMBP3BA6NNM3 1639 aa23.96■■□□□ 1.43
CRAT-208ENST00000464290 RAPGEF6Q8TEU7 1601 aa23.96■■□□□ 1.43
CRAT-208ENST00000464290 RIMBP3Q9UFD9 1639 aa23.96■■□□□ 1.43
CRAT-208ENST00000464290 UACAQ9BZF9 1416 aa23.94■■□□□ 1.42
CRAT-208ENST00000464290 NUP153P49790 1475 aaKnown RBP23.92■■□□□ 1.42
CRAT-208ENST00000464290 HECW1Q76N89 1606 aa23.9■■□□□ 1.42
CRAT-208ENST00000464290 LRRIQ1Q96JM4 1722 aa23.88■■□□□ 1.41
CRAT-208ENST00000464290 ARID3CA6NKF2 412 aa23.88■■□□□ 1.41
CRAT-208ENST00000464290 APLP2Q06481 763 aa23.88■■□□□ 1.41
CRAT-208ENST00000464290 EPRSP07814 1512 aaKnown RBP23.87■■□□□ 1.41
CRAT-208ENST00000464290 ABCC2Q92887 1545 aa23.87■■□□□ 1.41
CRAT-208ENST00000464290 UHRF1BP1LA0JNW5 1464 aa23.87■■□□□ 1.41
CRAT-208ENST00000464290 MAP3K1Q13233 1512 aa23.84■■□□□ 1.41
CRAT-208ENST00000464290 CYB5RLQ6IPT4 315 aa23.84■■□□□ 1.41
CRAT-208ENST00000464290 CDK13Q14004 1512 aaKnown RBP23.83■■□□□ 1.41
CRAT-208ENST00000464290 TIAM1Q13009 1591 aa23.82■■□□□ 1.4
CRAT-208ENST00000464290 ATP10BO94823 1461 aa23.82■■□□□ 1.4
CRAT-208ENST00000464290 CCDC18Q5T9S5 1454 aa23.82■■□□□ 1.4
CRAT-208ENST00000464290 PPARGC1BQ86YN6 1023 aaKnown RBP23.82■■□□□ 1.4
CRAT-208ENST00000464290 ADCY10Q96PN6 1610 aa23.81■■□□□ 1.4
CRAT-208ENST00000464290 KANK4Q5T7N3 995 aaPredicted RBP23.81■■□□□ 1.4
CRAT-208ENST00000464290 DNAJC5Q9H3Z4 198 aa23.81■■□□□ 1.4
CRAT-208ENST00000464290 CFAP43Q8NDM7 1665 aa23.79■■□□□ 1.4
CRAT-208ENST00000464290 KDM5BQ9UGL1 1544 aa23.76■■□□□ 1.39
CRAT-208ENST00000464290 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.76■■□□□ 1.39
CRAT-208ENST00000464290 HNRNPUL2Q1KMD3 747 aaKnown RBP23.76■■□□□ 1.39
CRAT-208ENST00000464290 LRRC9Q6ZRR7 1453 aa23.74■■□□□ 1.39
CRAT-208ENST00000464290 MAGI3Q5TCQ9 1506 aa23.72■■□□□ 1.39
CRAT-208ENST00000464290 ZCCHC11Q5TAX3 1644 aaKnown RBP23.7■■□□□ 1.39
CRAT-208ENST00000464290 CDK11AQ9UQ88 783 aaPredicted RBP23.69■■□□□ 1.38
CRAT-208ENST00000464290 MTUS2Q5JR59 1369 aa23.67■■□□□ 1.38
CRAT-208ENST00000464290 PLEKHD1A6NEE1 506 aa23.66■■□□□ 1.38
CRAT-208ENST00000464290 NPM1P06748 294 aaKnown RBP eCLIP23.65■■□□□ 1.38
CRAT-208ENST00000464290 EHBP1L1Q8N3D4 1523 aa23.64■■□□□ 1.37
CRAT-208ENST00000464290 TROQ12816 1431 aaPredicted RBP23.63■■□□□ 1.37
CRAT-208ENST00000464290 ASXL2Q76L83 1435 aa23.57■■□□□ 1.36
CRAT-208ENST00000464290 NCOA2Q15596 1464 aa23.55■■□□□ 1.36
CRAT-208ENST00000464290 SUPT6HQ7KZ85 1726 aaKnown RBP23.53■■□□□ 1.36
CRAT-208ENST00000464290 KIF14Q15058 1648 aa23.53■■□□□ 1.36
CRAT-208ENST00000464290 WDR7Q9Y4E6 1490 aa23.53■■□□□ 1.36
CRAT-208ENST00000464290 KCNH8Q96L42 1107 aa23.52■■□□□ 1.36
CRAT-208ENST00000464290 PHLDB1Q86UU1 1377 aa23.51■■□□□ 1.35
CRAT-208ENST00000464290 MAPKBP1O60336 1514 aa23.49■■□□□ 1.35
CRAT-208ENST00000464290 ABCC10Q5T3U5 1492 aa23.47■■□□□ 1.35
CRAT-208ENST00000464290 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.43■■□□□ 1.34
CRAT-208ENST00000464290 CCNB3Q8WWL7 1395 aa23.42■■□□□ 1.34
CRAT-208ENST00000464290 MYOM3Q5VTT5 1437 aa23.41■■□□□ 1.34
CRAT-208ENST00000464290 GPATCH8Q9UKJ3 1502 aaKnown RBP23.4■■□□□ 1.34
CRAT-208ENST00000464290 TTC37Q6PGP7 1564 aa23.4■■□□□ 1.34
CRAT-208ENST00000464290 RRBP1Q9P2E9 1410 aaKnown RBP23.37■■□□□ 1.33
CRAT-208ENST00000464290 TRIM26Q12899 539 aaPredicted RBP23.37■■□□□ 1.33
CRAT-208ENST00000464290 FGD6Q6ZV73 1430 aa23.36■■□□□ 1.33
CRAT-208ENST00000464290 ABCA9Q8IUA7 1624 aa23.35■■□□□ 1.33
CRAT-208ENST00000464290 CDC42BPAQ5VT25 1732 aa23.34■■□□□ 1.33
CRAT-208ENST00000464290 MIA2Q96PC5 1412 aa23.33■■□□□ 1.32
CRAT-208ENST00000464290 CFDP1Q9UEE9 299 aaPredicted RBP23.32■■□□□ 1.32
CRAT-208ENST00000464290 PLCH2O75038 1416 aa23.31■■□□□ 1.32
CRAT-208ENST00000464290 GLI2P10070 1586 aa23.31■■□□□ 1.32
CRAT-208ENST00000464290 ITSN2Q9NZM3 1697 aa23.3■■□□□ 1.32
CRAT-208ENST00000464290 DIP2BQ9P265 1576 aa23.3■■□□□ 1.32
CRAT-208ENST00000464290 FAM69CQ0P6D2 419 aa23.29■■□□□ 1.32
CRAT-208ENST00000464290 PREX2Q70Z35 1606 aa23.29■■□□□ 1.32
CRAT-208ENST00000464290 MYO5CQ9NQX4 1742 aa23.28■■□□□ 1.32
CRAT-208ENST00000464290 CDC42BPBQ9Y5S2 1711 aa23.28■■□□□ 1.32
CRAT-208ENST00000464290 ZNF644Q9H582 1327 aaPredicted RBP23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms