RNA–Protein interactions for RNA: ENST00000463685.1

ABCF3-204, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 661 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-204ENST00000463685 TNIKQ9UKE5 1360 aa24.28■■□□□ 1.48
ABCF3-204ENST00000463685 RANGAP1P46060 587 aaPredicted RBP24.26■■□□□ 1.47
ABCF3-204ENST00000463685 CTTNBP2Q8WZ74 1663 aa24.25■■□□□ 1.47
ABCF3-204ENST00000463685 KIAA0586Q9BVV6 1533 aa24.21■■□□□ 1.47
ABCF3-204ENST00000463685 OSCARQ8IYS5 282 aa24.2■■□□□ 1.46
ABCF3-204ENST00000463685 IQGAP2Q13576 1575 aa24.19■■□□□ 1.46
ABCF3-204ENST00000463685 CLASP1Q7Z460 1538 aa24.16■■□□□ 1.46
ABCF3-204ENST00000463685 CEP162Q5TB80 1403 aa24.13■■□□□ 1.45
ABCF3-204ENST00000463685 JPH4Q96JJ6 628 aa24.1■■□□□ 1.45
ABCF3-204ENST00000463685 CLIP1P30622 1438 aa24.08■■□□□ 1.44
ABCF3-204ENST00000463685 UGGT2Q9NYU1 1516 aa24.06■■□□□ 1.44
ABCF3-204ENST00000463685 P3H3Q8IVL6 736 aa24.06■■□□□ 1.44
ABCF3-204ENST00000463685 SHROOM2Q13796 1616 aa24.03■■□□□ 1.44
ABCF3-204ENST00000463685 ARHGAP35Q9NRY4 1499 aa24.02■■□□□ 1.44
ABCF3-204ENST00000463685 PRG4Q92954 1404 aaPredicted RBP24.01■■□□□ 1.43
ABCF3-204ENST00000463685 DISP1Q96F81 1524 aa24■■□□□ 1.43
ABCF3-204ENST00000463685 SAMD9Q5K651 1589 aa23.99■■□□□ 1.43
ABCF3-204ENST00000463685 ERCC6L2Q5T890 1561 aa23.98■■□□□ 1.43
ABCF3-204ENST00000463685 EFCAB5A4FU69 1503 aa23.96■■□□□ 1.43
ABCF3-204ENST00000463685 FHOD3Q2V2M9 1422 aa23.96■■□□□ 1.43
ABCF3-204ENST00000463685 KIAA0556O60303 1618 aa23.95■■□□□ 1.43
ABCF3-204ENST00000463685 ARAP1Q96P48 1450 aa23.94■■□□□ 1.42
ABCF3-204ENST00000463685 TTBK1Q5TCY1 1321 aaPredicted RBP23.93■■□□□ 1.42
ABCF3-204ENST00000463685 CARMIL2Q6F5E8 1435 aa23.93■■□□□ 1.42
ABCF3-204ENST00000463685 ARHGEF11O15085 1522 aa23.81■■□□□ 1.4
ABCF3-204ENST00000463685 PTPRGP23470 1445 aa23.79■■□□□ 1.4
ABCF3-204ENST00000463685 RIMBP3CA6NJZ7 1639 aa23.77■■□□□ 1.4
ABCF3-204ENST00000463685 RIMBP3BA6NNM3 1639 aa23.77■■□□□ 1.4
ABCF3-204ENST00000463685 RIMBP3Q9UFD9 1639 aa23.77■■□□□ 1.4
ABCF3-204ENST00000463685 VPS8Q8N3P4 1428 aa23.76■■□□□ 1.39
ABCF3-204ENST00000463685 FMN1Q68DA7 1419 aa23.75■■□□□ 1.39
ABCF3-204ENST00000463685 PLB1Q6P1J6 1458 aa23.71■■□□□ 1.39
ABCF3-204ENST00000463685 ATP1B4Q9UN42 357 aaPredicted RBP23.71■■□□□ 1.39
ABCF3-204ENST00000463685 PCF11O94913 1555 aaKnown RBP23.7■■□□□ 1.38
ABCF3-204ENST00000463685 DNAJC5Q9H3Z4 198 aa23.66■■□□□ 1.38
ABCF3-204ENST00000463685 CASKIN1Q8WXD9 1431 aa23.66■■□□□ 1.38
ABCF3-204ENST00000463685 ARID3CA6NKF2 412 aa23.65■■□□□ 1.38
ABCF3-204ENST00000463685 RAPGEF6Q8TEU7 1601 aa23.65■■□□□ 1.38
ABCF3-204ENST00000463685 ABCA8O94911 1581 aa23.65■■□□□ 1.38
ABCF3-204ENST00000463685 CYB5RLQ6IPT4 315 aa23.63■■□□□ 1.37
ABCF3-204ENST00000463685 UACAQ9BZF9 1416 aa23.63■■□□□ 1.37
ABCF3-204ENST00000463685 FYCO1Q9BQS8 1478 aa23.62■■□□□ 1.37
ABCF3-204ENST00000463685 NUP153P49790 1475 aaKnown RBP23.59■■□□□ 1.37
ABCF3-204ENST00000463685 HECW1Q76N89 1606 aa23.58■■□□□ 1.36
ABCF3-204ENST00000463685 ABCC2Q92887 1545 aa23.57■■□□□ 1.36
ABCF3-204ENST00000463685 LRRIQ1Q96JM4 1722 aa23.56■■□□□ 1.36
ABCF3-204ENST00000463685 ADCY10Q96PN6 1610 aa23.55■■□□□ 1.36
ABCF3-204ENST00000463685 UHRF1BP1LA0JNW5 1464 aa23.54■■□□□ 1.36
ABCF3-204ENST00000463685 CDK13Q14004 1512 aaKnown RBP23.54■■□□□ 1.36
ABCF3-204ENST00000463685 EPRSP07814 1512 aaKnown RBP23.52■■□□□ 1.36
ABCF3-204ENST00000463685 PPARGC1BQ86YN6 1023 aaKnown RBP23.5■■□□□ 1.35
ABCF3-204ENST00000463685 ATP10BO94823 1461 aa23.49■■□□□ 1.35
ABCF3-204ENST00000463685 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.49■■□□□ 1.35
ABCF3-204ENST00000463685 APLP2Q06481 763 aa23.49■■□□□ 1.35
ABCF3-204ENST00000463685 HNRNPUL2Q1KMD3 747 aaKnown RBP23.49■■□□□ 1.35
ABCF3-204ENST00000463685 CCDC18Q5T9S5 1454 aa23.46■■□□□ 1.35
ABCF3-204ENST00000463685 TIAM1Q13009 1591 aa23.45■■□□□ 1.34
ABCF3-204ENST00000463685 CFAP43Q8NDM7 1665 aa23.44■■□□□ 1.34
ABCF3-204ENST00000463685 KANK4Q5T7N3 995 aaPredicted RBP23.44■■□□□ 1.34
ABCF3-204ENST00000463685 ZCCHC11Q5TAX3 1644 aaKnown RBP23.44■■□□□ 1.34
ABCF3-204ENST00000463685 KDM5BQ9UGL1 1544 aa23.43■■□□□ 1.34
ABCF3-204ENST00000463685 MAP3K1Q13233 1512 aa23.4■■□□□ 1.34
ABCF3-204ENST00000463685 MAGI3Q5TCQ9 1506 aa23.39■■□□□ 1.34
ABCF3-204ENST00000463685 NPM1P06748 294 aaKnown RBP eCLIP23.38■■□□□ 1.33
ABCF3-204ENST00000463685 LRRC9Q6ZRR7 1453 aa23.36■■□□□ 1.33
ABCF3-204ENST00000463685 MTUS2Q5JR59 1369 aa23.34■■□□□ 1.33
ABCF3-204ENST00000463685 PLEKHD1A6NEE1 506 aa23.33■■□□□ 1.33
ABCF3-204ENST00000463685 CDK11AQ9UQ88 783 aaPredicted RBP23.33■■□□□ 1.33
ABCF3-204ENST00000463685 TROQ12816 1431 aaPredicted RBP23.29■■□□□ 1.32
ABCF3-204ENST00000463685 ASXL2Q76L83 1435 aa23.29■■□□□ 1.32
ABCF3-204ENST00000463685 EHBP1L1Q8N3D4 1523 aa23.28■■□□□ 1.32
ABCF3-204ENST00000463685 KCNH8Q96L42 1107 aa23.26■■□□□ 1.31
ABCF3-204ENST00000463685 WDR7Q9Y4E6 1490 aa23.25■■□□□ 1.31
ABCF3-204ENST00000463685 KIF14Q15058 1648 aa23.24■■□□□ 1.31
ABCF3-204ENST00000463685 MAPKBP1O60336 1514 aa23.22■■□□□ 1.31
ABCF3-204ENST00000463685 NCOA2Q15596 1464 aa23.19■■□□□ 1.3
ABCF3-204ENST00000463685 SUPT6HQ7KZ85 1726 aaKnown RBP23.19■■□□□ 1.3
ABCF3-204ENST00000463685 PHLDB1Q86UU1 1377 aa23.14■■□□□ 1.3
ABCF3-204ENST00000463685 ABCC10Q5T3U5 1492 aa23.13■■□□□ 1.29
ABCF3-204ENST00000463685 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.13■■□□□ 1.29
ABCF3-204ENST00000463685 TTC37Q6PGP7 1564 aa23.12■■□□□ 1.29
ABCF3-204ENST00000463685 CCNB3Q8WWL7 1395 aa23.09■■□□□ 1.29
ABCF3-204ENST00000463685 FAM69CQ0P6D2 419 aa23.06■■□□□ 1.28
ABCF3-204ENST00000463685 GPATCH8Q9UKJ3 1502 aaKnown RBP23.06■■□□□ 1.28
ABCF3-204ENST00000463685 DIP2BQ9P265 1576 aa23.06■■□□□ 1.28
ABCF3-204ENST00000463685 ABCA9Q8IUA7 1624 aa23.05■■□□□ 1.28
ABCF3-204ENST00000463685 MYOM3Q5VTT5 1437 aa23.04■■□□□ 1.28
ABCF3-204ENST00000463685 CDC42BPAQ5VT25 1732 aa23.03■■□□□ 1.28
ABCF3-204ENST00000463685 GLI2P10070 1586 aa23.01■■□□□ 1.27
ABCF3-204ENST00000463685 FGD6Q6ZV73 1430 aa22.99■■□□□ 1.27
ABCF3-204ENST00000463685 MYO5CQ9NQX4 1742 aa22.99■■□□□ 1.27
ABCF3-204ENST00000463685 CD109Q6YHK3 1445 aa22.99■■□□□ 1.27
ABCF3-204ENST00000463685 KIF13AQ9H1H9 1805 aa22.98■■□□□ 1.27
ABCF3-204ENST00000463685 PREX2Q70Z35 1606 aa22.98■■□□□ 1.27
ABCF3-204ENST00000463685 CFDP1Q9UEE9 299 aaPredicted RBP22.98■■□□□ 1.27
ABCF3-204ENST00000463685 ITSN2Q9NZM3 1697 aa22.97■■□□□ 1.27
ABCF3-204ENST00000463685 CDC42BPBQ9Y5S2 1711 aa22.97■■□□□ 1.27
ABCF3-204ENST00000463685 ZNF777Q9ULD5 760 aaPredicted RBP22.97■■□□□ 1.27
ABCF3-204ENST00000463685 PLCH2O75038 1416 aa22.97■■□□□ 1.27
ABCF3-204ENST00000463685 ZNF644Q9H582 1327 aaPredicted RBP22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 126.8 ms