RNA–Protein interactions for RNA: ENST00000463428.5

PHACTR4-203, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 1,421 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-203ENST00000463428 CLASP1Q7Z460 1538 aa22.67■■□□□ 1.22
PHACTR4-203ENST00000463428 KIAA0586Q9BVV6 1533 aa22.67■■□□□ 1.22
PHACTR4-203ENST00000463428 CTTNBP2Q8WZ74 1663 aa22.67■■□□□ 1.22
PHACTR4-203ENST00000463428 UBTFP17480 764 aaKnown RBP22.65■■□□□ 1.22
PHACTR4-203ENST00000463428 TNIKQ9UKE5 1360 aa22.6■■□□□ 1.21
PHACTR4-203ENST00000463428 IQGAP2Q13576 1575 aa22.6■■□□□ 1.21
PHACTR4-203ENST00000463428 SHROOM2Q13796 1616 aa22.56■■□□□ 1.2
PHACTR4-203ENST00000463428 JPH4Q96JJ6 628 aa22.56■■□□□ 1.2
PHACTR4-203ENST00000463428 UGGT2Q9NYU1 1516 aa22.52■■□□□ 1.2
PHACTR4-203ENST00000463428 DISP1Q96F81 1524 aa22.45■■□□□ 1.18
PHACTR4-203ENST00000463428 PRG4Q92954 1404 aaPredicted RBP22.45■■□□□ 1.18
PHACTR4-203ENST00000463428 ERCC6L2Q5T890 1561 aa22.43■■□□□ 1.18
PHACTR4-203ENST00000463428 SAMD9Q5K651 1589 aa22.42■■□□□ 1.18
PHACTR4-203ENST00000463428 RANGAP1P46060 587 aaPredicted RBP22.41■■□□□ 1.18
PHACTR4-203ENST00000463428 CEP162Q5TB80 1403 aa22.39■■□□□ 1.18
PHACTR4-203ENST00000463428 KIAA0556O60303 1618 aa22.39■■□□□ 1.17
PHACTR4-203ENST00000463428 ARHGAP35Q9NRY4 1499 aa22.38■■□□□ 1.17
PHACTR4-203ENST00000463428 CARMIL2Q6F5E8 1435 aa22.38■■□□□ 1.17
PHACTR4-203ENST00000463428 EFCAB5A4FU69 1503 aa22.37■■□□□ 1.17
PHACTR4-203ENST00000463428 CLIP1P30622 1438 aa22.37■■□□□ 1.17
PHACTR4-203ENST00000463428 ARHGEF11O15085 1522 aa22.36■■□□□ 1.17
PHACTR4-203ENST00000463428 DNAJC5Q9H3Z4 198 aa22.35■■□□□ 1.17
PHACTR4-203ENST00000463428 P3H3Q8IVL6 736 aa22.33■■□□□ 1.17
PHACTR4-203ENST00000463428 RIMBP3CA6NJZ7 1639 aa22.32■■□□□ 1.16
PHACTR4-203ENST00000463428 RIMBP3BA6NNM3 1639 aa22.32■■□□□ 1.16
PHACTR4-203ENST00000463428 RIMBP3Q9UFD9 1639 aa22.32■■□□□ 1.16
PHACTR4-203ENST00000463428 FHOD3Q2V2M9 1422 aa22.29■■□□□ 1.16
PHACTR4-203ENST00000463428 ARAP1Q96P48 1450 aa22.27■■□□□ 1.16
PHACTR4-203ENST00000463428 PTPRGP23470 1445 aa22.24■■□□□ 1.15
PHACTR4-203ENST00000463428 TTBK1Q5TCY1 1321 aaPredicted RBP22.18■■□□□ 1.14
PHACTR4-203ENST00000463428 FMN1Q68DA7 1419 aa22.16■■□□□ 1.14
PHACTR4-203ENST00000463428 ABCA8O94911 1581 aa22.13■■□□□ 1.13
PHACTR4-203ENST00000463428 PLB1Q6P1J6 1458 aa22.13■■□□□ 1.13
PHACTR4-203ENST00000463428 CYB5RLQ6IPT4 315 aa22.13■■□□□ 1.13
PHACTR4-203ENST00000463428 UACAQ9BZF9 1416 aa22.11■■□□□ 1.13
PHACTR4-203ENST00000463428 VPS8Q8N3P4 1428 aa22.1■■□□□ 1.13
PHACTR4-203ENST00000463428 RAPGEF6Q8TEU7 1601 aa22.09■■□□□ 1.13
PHACTR4-203ENST00000463428 UHRF1BP1LA0JNW5 1464 aa22.08■■□□□ 1.13
PHACTR4-203ENST00000463428 CASKIN1Q8WXD9 1431 aa22.06■■□□□ 1.12
PHACTR4-203ENST00000463428 ABCC2Q92887 1545 aa22.06■■□□□ 1.12
PHACTR4-203ENST00000463428 ADCY10Q96PN6 1610 aa22.06■■□□□ 1.12
PHACTR4-203ENST00000463428 PCF11O94913 1555 aaKnown RBP22.06■■□□□ 1.12
PHACTR4-203ENST00000463428 NUP153P49790 1475 aaKnown RBP22.03■■□□□ 1.12
PHACTR4-203ENST00000463428 FYCO1Q9BQS8 1478 aa22.01■■□□□ 1.11
PHACTR4-203ENST00000463428 HECW1Q76N89 1606 aa21.99■■□□□ 1.11
PHACTR4-203ENST00000463428 LRRIQ1Q96JM4 1722 aa21.99■■□□□ 1.11
PHACTR4-203ENST00000463428 KDM5BQ9UGL1 1544 aa21.98■■□□□ 1.11
PHACTR4-203ENST00000463428 ATP10BO94823 1461 aa21.97■■□□□ 1.11
PHACTR4-203ENST00000463428 ATP1B4Q9UN42 357 aaPredicted RBP21.96■■□□□ 1.11
PHACTR4-203ENST00000463428 EPRSP07814 1512 aaKnown RBP21.95■■□□□ 1.1
PHACTR4-203ENST00000463428 ZCCHC11Q5TAX3 1644 aaKnown RBP21.92■■□□□ 1.1
PHACTR4-203ENST00000463428 ARID3CA6NKF2 412 aa21.91■■□□□ 1.1
PHACTR4-203ENST00000463428 CDK13Q14004 1512 aaKnown RBP21.91■■□□□ 1.1
PHACTR4-203ENST00000463428 CCDC18Q5T9S5 1454 aa21.89■■□□□ 1.09
PHACTR4-203ENST00000463428 NPM1P06748 294 aaKnown RBP eCLIP21.87■■□□□ 1.09
PHACTR4-203ENST00000463428 MAP3K1Q13233 1512 aa21.86■■□□□ 1.09
PHACTR4-203ENST00000463428 TIAM1Q13009 1591 aa21.84■■□□□ 1.09
PHACTR4-203ENST00000463428 CFAP43Q8NDM7 1665 aa21.84■■□□□ 1.09
PHACTR4-203ENST00000463428 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.82■■□□□ 1.08
PHACTR4-203ENST00000463428 HNRNPUL2Q1KMD3 747 aaKnown RBP21.82■■□□□ 1.08
PHACTR4-203ENST00000463428 MAPKBP1O60336 1514 aa21.81■■□□□ 1.08
PHACTR4-203ENST00000463428 MAGI3Q5TCQ9 1506 aa21.81■■□□□ 1.08
PHACTR4-203ENST00000463428 ASXL2Q76L83 1435 aa21.79■■□□□ 1.08
PHACTR4-203ENST00000463428 PLEKHD1A6NEE1 506 aa21.78■■□□□ 1.08
PHACTR4-203ENST00000463428 APLP2Q06481 763 aa21.77■■□□□ 1.08
PHACTR4-203ENST00000463428 KANK4Q5T7N3 995 aaPredicted RBP21.77■■□□□ 1.08
PHACTR4-203ENST00000463428 CDK11AQ9UQ88 783 aaPredicted RBP21.77■■□□□ 1.08
PHACTR4-203ENST00000463428 LRRC9Q6ZRR7 1453 aa21.75■■□□□ 1.07
PHACTR4-203ENST00000463428 WDR7Q9Y4E6 1490 aa21.75■■□□□ 1.07
PHACTR4-203ENST00000463428 TROQ12816 1431 aaPredicted RBP21.74■■□□□ 1.07
PHACTR4-203ENST00000463428 MTUS2Q5JR59 1369 aa21.7■■□□□ 1.07
PHACTR4-203ENST00000463428 EHBP1L1Q8N3D4 1523 aa21.7■■□□□ 1.06
PHACTR4-203ENST00000463428 KCNH8Q96L42 1107 aa21.67■■□□□ 1.06
PHACTR4-203ENST00000463428 KIF14Q15058 1648 aa21.66■■□□□ 1.06
PHACTR4-203ENST00000463428 ABCC10Q5T3U5 1492 aa21.66■■□□□ 1.06
PHACTR4-203ENST00000463428 DIP2BQ9P265 1576 aa21.64■■□□□ 1.05
PHACTR4-203ENST00000463428 PPARGC1BQ86YN6 1023 aaKnown RBP21.63■■□□□ 1.05
PHACTR4-203ENST00000463428 GLI2P10070 1586 aa21.62■■□□□ 1.05
PHACTR4-203ENST00000463428 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.62■■□□□ 1.05
PHACTR4-203ENST00000463428 SUPT6HQ7KZ85 1726 aaKnown RBP21.61■■□□□ 1.05
PHACTR4-203ENST00000463428 KIF13AQ9H1H9 1805 aa21.61■■□□□ 1.05
PHACTR4-203ENST00000463428 ABCA9Q8IUA7 1624 aa21.6■■□□□ 1.05
PHACTR4-203ENST00000463428 NCOA2Q15596 1464 aa21.59■■□□□ 1.05
PHACTR4-203ENST00000463428 TTC37Q6PGP7 1564 aa21.58■■□□□ 1.04
PHACTR4-203ENST00000463428 FAM69CQ0P6D2 419 aa21.57■■□□□ 1.04
PHACTR4-203ENST00000463428 MAP3K4Q9Y6R4 1608 aa21.54■■□□□ 1.04
PHACTR4-203ENST00000463428 GPATCH8Q9UKJ3 1502 aaKnown RBP21.52■■□□□ 1.04
PHACTR4-203ENST00000463428 CDC42BPAQ5VT25 1732 aa21.52■■□□□ 1.04
PHACTR4-203ENST00000463428 PHLDB1Q86UU1 1377 aa21.51■■□□□ 1.03
PHACTR4-203ENST00000463428 CD109Q6YHK3 1445 aa21.5■■□□□ 1.03
PHACTR4-203ENST00000463428 CCNB3Q8WWL7 1395 aa21.5■■□□□ 1.03
PHACTR4-203ENST00000463428 PLCH2O75038 1416 aa21.49■■□□□ 1.03
PHACTR4-203ENST00000463428 MYO5CQ9NQX4 1742 aa21.49■■□□□ 1.03
PHACTR4-203ENST00000463428 CDC42BPBQ9Y5S2 1711 aa21.49■■□□□ 1.03
PHACTR4-203ENST00000463428 PREX2Q70Z35 1606 aa21.47■■□□□ 1.03
PHACTR4-203ENST00000463428 TRHP20396 242 aaPredicted RBP21.46■■□□□ 1.03
PHACTR4-203ENST00000463428 MYOM3Q5VTT5 1437 aa21.46■■□□□ 1.03
PHACTR4-203ENST00000463428 ARAP3Q8WWN8 1544 aa21.46■■□□□ 1.03
PHACTR4-203ENST00000463428 PPRC1Q5VV67 1664 aaKnown RBP21.46■■□□□ 1.03
PHACTR4-203ENST00000463428 ITSN2Q9NZM3 1697 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms