RNA–Protein interactions for RNA: ENST00000462815.5

PTPN7-204, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,147 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-204ENST00000462815 IGF1RP08069 1367 aa19.89■□□□□ 0.77
PTPN7-204ENST00000462815 AEBP2Q6ZN18 517 aaPredicted RBP19.87■□□□□ 0.77
PTPN7-204ENST00000462815 ADCY10Q96PN6 1610 aa19.87■□□□□ 0.77
PTPN7-204ENST00000462815 CUL7Q14999 1698 aa19.86■□□□□ 0.77
PTPN7-204ENST00000462815 MAPKBP1O60336 1514 aa19.86■□□□□ 0.77
PTPN7-204ENST00000462815 KIAA0586Q9BVV6 1533 aa19.86■□□□□ 0.77
PTPN7-204ENST00000462815 ABCC10Q5T3U5 1492 aa19.83■□□□□ 0.76
PTPN7-204ENST00000462815 KIF27Q86VH2 1401 aa19.83■□□□□ 0.76
PTPN7-204ENST00000462815 DIP2BQ9P265 1576 aa19.81■□□□□ 0.76
PTPN7-204ENST00000462815 FAM69CQ0P6D2 419 aa19.71■□□□□ 0.75
PTPN7-204ENST00000462815 CARMIL1Q5VZK9 1371 aa19.7■□□□□ 0.74
PTPN7-204ENST00000462815 IQGAP2Q13576 1575 aa19.66■□□□□ 0.74
PTPN7-204ENST00000462815 NPM1P06748 294 aaKnown RBP eCLIP19.65■□□□□ 0.74
PTPN7-204ENST00000462815 PTPRGP23470 1445 aa19.64■□□□□ 0.73
PTPN7-204ENST00000462815 ABCC2Q92887 1545 aa19.62■□□□□ 0.73
PTPN7-204ENST00000462815 DISP1Q96F81 1524 aa19.62■□□□□ 0.73
PTPN7-204ENST00000462815 TNIKQ9UKE5 1360 aa19.61■□□□□ 0.73
PTPN7-204ENST00000462815 KDM6BO15054 1643 aa19.6■□□□□ 0.73
PTPN7-204ENST00000462815 UHRF1BP1LA0JNW5 1464 aa19.6■□□□□ 0.73
PTPN7-204ENST00000462815 PPRC1Q5VV67 1664 aaKnown RBP19.58■□□□□ 0.72
PTPN7-204ENST00000462815 CARMIL2Q6F5E8 1435 aa19.58■□□□□ 0.72
PTPN7-204ENST00000462815 TSPOAP1O95153 1857 aa19.56■□□□□ 0.72
PTPN7-204ENST00000462815 GLI2P10070 1586 aa19.56■□□□□ 0.72
PTPN7-204ENST00000462815 UGGT2Q9NYU1 1516 aa19.56■□□□□ 0.72
PTPN7-204ENST00000462815 ASXL2Q76L83 1435 aa19.54■□□□□ 0.72
PTPN7-204ENST00000462815 RAPGEF2Q9Y4G8 1499 aa19.54■□□□□ 0.72
PTPN7-204ENST00000462815 UACAQ9BZF9 1416 aa19.52■□□□□ 0.72
PTPN7-204ENST00000462815 KDM5BQ9UGL1 1544 aa19.51■□□□□ 0.71
PTPN7-204ENST00000462815 PLB1Q6P1J6 1458 aa19.51■□□□□ 0.71
PTPN7-204ENST00000462815 KIAA0556O60303 1618 aa19.51■□□□□ 0.71
PTPN7-204ENST00000462815 KDM4FA0A1W2PPD8 638 aa19.48■□□□□ 0.71
PTPN7-204ENST00000462815 TTBK1Q5TCY1 1321 aaPredicted RBP19.47■□□□□ 0.71
PTPN7-204ENST00000462815 ZCCHC11Q5TAX3 1644 aaKnown RBP19.46■□□□□ 0.71
PTPN7-204ENST00000462815 MAP3K4Q9Y6R4 1608 aa19.46■□□□□ 0.71
PTPN7-204ENST00000462815 EPRSP07814 1512 aaKnown RBP19.46■□□□□ 0.71
PTPN7-204ENST00000462815 COL17A1Q9UMD9 1497 aaPredicted RBP19.42■□□□□ 0.7
PTPN7-204ENST00000462815 CTTNBP2Q8WZ74 1663 aa19.41■□□□□ 0.7
PTPN7-204ENST00000462815 PRXQ9BXM0 1461 aa19.37■□□□□ 0.69
PTPN7-204ENST00000462815 ABCA8O94911 1581 aa19.36■□□□□ 0.69
PTPN7-204ENST00000462815 WDR7Q9Y4E6 1490 aa19.34■□□□□ 0.69
PTPN7-204ENST00000462815 TEX14Q8IWB6 1497 aa19.31■□□□□ 0.68
PTPN7-204ENST00000462815 ADGRL1O94910 1474 aa19.29■□□□□ 0.68
PTPN7-204ENST00000462815 GOLGA3Q08378 1498 aa19.29■□□□□ 0.68
PTPN7-204ENST00000462815 MAGI3Q5TCQ9 1506 aa19.25■□□□□ 0.67
PTPN7-204ENST00000462815 CFAP43Q8NDM7 1665 aa19.25■□□□□ 0.67
PTPN7-204ENST00000462815 CD109Q6YHK3 1445 aa19.19■□□□□ 0.66
PTPN7-204ENST00000462815 SAMD9Q5K651 1589 aa19.19■□□□□ 0.66
PTPN7-204ENST00000462815 ATP10BO94823 1461 aa19.16■□□□□ 0.66
PTPN7-204ENST00000462815 ARAP3Q8WWN8 1544 aa19.11■□□□□ 0.65
PTPN7-204ENST00000462815 ABCA9Q8IUA7 1624 aa19.11■□□□□ 0.65
PTPN7-204ENST00000462815 KCNH8Q96L42 1107 aa19.1■□□□□ 0.65
PTPN7-204ENST00000462815 HECW2Q9P2P5 1572 aa19.09■□□□□ 0.65
PTPN7-204ENST00000462815 RAPGEF6Q8TEU7 1601 aa19.07■□□□□ 0.64
PTPN7-204ENST00000462815 KIF21BO75037 1637 aa19.07■□□□□ 0.64
PTPN7-204ENST00000462815 P3H3Q8IVL6 736 aa19.05■□□□□ 0.64
PTPN7-204ENST00000462815 CSRNP3Q8WYN3 585 aa19.05■□□□□ 0.64
PTPN7-204ENST00000462815 NUP153P49790 1475 aaKnown RBP19.03■□□□□ 0.64
PTPN7-204ENST00000462815 ARID3CA6NKF2 412 aa19.02■□□□□ 0.64
PTPN7-204ENST00000462815 FRMPD1Q5SYB0 1578 aa19.02■□□□□ 0.63
PTPN7-204ENST00000462815 EEA1Q15075 1411 aa19■□□□□ 0.63
PTPN7-204ENST00000462815 NEO1Q92859 1461 aa18.98■□□□□ 0.63
PTPN7-204ENST00000462815 PHLDB1Q86UU1 1377 aa18.98■□□□□ 0.63
PTPN7-204ENST00000462815 FHOD3Q2V2M9 1422 aa18.97■□□□□ 0.63
PTPN7-204ENST00000462815 ADAMTSL3P82987 1691 aa18.95■□□□□ 0.62
PTPN7-204ENST00000462815 ILDR1Q86SU0 546 aaPredicted RBP18.95■□□□□ 0.62
PTPN7-204ENST00000462815 RAPGEF3O95398 923 aa18.91■□□□□ 0.62
PTPN7-204ENST00000462815 EFCAB5A4FU69 1503 aa18.9■□□□□ 0.62
PTPN7-204ENST00000462815 BCORL1Q5H9F3 1711 aa18.88■□□□□ 0.61
PTPN7-204ENST00000462815 RICTORQ6R327 1708 aa18.88■□□□□ 0.61
PTPN7-204ENST00000462815 PTPRMP28827 1452 aa18.88■□□□□ 0.61
PTPN7-204ENST00000462815 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.88■□□□□ 0.61
PTPN7-204ENST00000462815 TTC37Q6PGP7 1564 aa18.87■□□□□ 0.61
PTPN7-204ENST00000462815 FAM9AQ8IZU1 332 aaPredicted RBP18.87■□□□□ 0.61
PTPN7-204ENST00000462815 ARHGEF40Q8TER5 1519 aa18.87■□□□□ 0.61
PTPN7-204ENST00000462815 MADDQ8WXG6 1647 aa18.83■□□□□ 0.61
PTPN7-204ENST00000462815 ZMYM4Q5VZL5 1548 aa18.82■□□□□ 0.6
PTPN7-204ENST00000462815 SIGLEC1Q9BZZ2 1709 aa18.82■□□□□ 0.6
PTPN7-204ENST00000462815 AKNAQ7Z591 1439 aa18.82■□□□□ 0.6
PTPN7-204ENST00000462815 CFAP74Q9C0B2 1584 aa18.81■□□□□ 0.6
PTPN7-204ENST00000462815 CDK13Q14004 1512 aaKnown RBP18.81■□□□□ 0.6
PTPN7-204ENST00000462815 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.81■□□□□ 0.6
PTPN7-204ENST00000462815 RANGAP1P46060 587 aaPredicted RBP18.81■□□□□ 0.6
PTPN7-204ENST00000462815 HNRNPUL2Q1KMD3 747 aaKnown RBP18.81■□□□□ 0.6
PTPN7-204ENST00000462815 FANCAO15360 1455 aa18.81■□□□□ 0.6
PTPN7-204ENST00000462815 DENND4BO75064 1496 aaPredicted RBP18.81■□□□□ 0.6
PTPN7-204ENST00000462815 PLEKHD1A6NEE1 506 aa18.78■□□□□ 0.6
PTPN7-204ENST00000462815 LMTK3Q96Q04 1460 aa18.75■□□□□ 0.59
PTPN7-204ENST00000462815 PCF11O94913 1555 aaKnown RBP18.75■□□□□ 0.59
PTPN7-204ENST00000462815 ARHGAP35Q9NRY4 1499 aa18.74■□□□□ 0.59
PTPN7-204ENST00000462815 YEATS2Q9ULM3 1422 aa18.74■□□□□ 0.59
PTPN7-204ENST00000462815 RIMS1Q86UR5 1692 aaKnown RBP18.73■□□□□ 0.59
PTPN7-204ENST00000462815 ZFYVE16Q7Z3T8 1539 aa18.73■□□□□ 0.59
PTPN7-204ENST00000462815 PLCH2O75038 1416 aa18.73■□□□□ 0.59
PTPN7-204ENST00000462815 HECW1Q76N89 1606 aa18.72■□□□□ 0.59
PTPN7-204ENST00000462815 POGZQ7Z3K3 1410 aa18.71■□□□□ 0.59
PTPN7-204ENST00000462815 MAGI2Q86UL8 1455 aa18.71■□□□□ 0.59
PTPN7-204ENST00000462815 LRRIQ1Q96JM4 1722 aa18.69■□□□□ 0.58
PTPN7-204ENST00000462815 FMN1Q68DA7 1419 aa18.68■□□□□ 0.58
PTPN7-204ENST00000462815 KIF14Q15058 1648 aa18.68■□□□□ 0.58
PTPN7-204ENST00000462815 ARID4BQ4LE39 1312 aaPredicted RBP18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms