RNA–Protein interactions for RNA: ENST00000462207.1

PBRM1-219, Transcript of polybromo 1, humanhuman

TSL 2

Gene PBRM1, Length 1,921 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-219ENST00000462207 CTTNBP2Q8WZ74 1663 aa21.9■■□□□ 1.1
PBRM1-219ENST00000462207 TNIKQ9UKE5 1360 aa21.88■■□□□ 1.09
PBRM1-219ENST00000462207 IQGAP2Q13576 1575 aa21.81■■□□□ 1.08
PBRM1-219ENST00000462207 KIAA0586Q9BVV6 1533 aa21.81■■□□□ 1.08
PBRM1-219ENST00000462207 RANGAP1P46060 587 aaPredicted RBP21.8■■□□□ 1.08
PBRM1-219ENST00000462207 CLASP1Q7Z460 1538 aa21.77■■□□□ 1.08
PBRM1-219ENST00000462207 CEP162Q5TB80 1403 aa21.76■■□□□ 1.07
PBRM1-219ENST00000462207 OSCARQ8IYS5 282 aa21.71■■□□□ 1.07
PBRM1-219ENST00000462207 CLIP1P30622 1438 aa21.7■■□□□ 1.06
PBRM1-219ENST00000462207 UGGT2Q9NYU1 1516 aa21.69■■□□□ 1.06
PBRM1-219ENST00000462207 SHROOM2Q13796 1616 aa21.67■■□□□ 1.06
PBRM1-219ENST00000462207 ARHGAP35Q9NRY4 1499 aa21.66■■□□□ 1.06
PBRM1-219ENST00000462207 JPH4Q96JJ6 628 aa21.65■■□□□ 1.06
PBRM1-219ENST00000462207 SAMD9Q5K651 1589 aa21.65■■□□□ 1.06
PBRM1-219ENST00000462207 DISP1Q96F81 1524 aa21.63■■□□□ 1.05
PBRM1-219ENST00000462207 EFCAB5A4FU69 1503 aa21.62■■□□□ 1.05
PBRM1-219ENST00000462207 P3H3Q8IVL6 736 aa21.61■■□□□ 1.05
PBRM1-219ENST00000462207 KIAA0556O60303 1618 aa21.61■■□□□ 1.05
PBRM1-219ENST00000462207 PRG4Q92954 1404 aaPredicted RBP21.6■■□□□ 1.05
PBRM1-219ENST00000462207 ERCC6L2Q5T890 1561 aa21.6■■□□□ 1.05
PBRM1-219ENST00000462207 ARAP1Q96P48 1450 aa21.59■■□□□ 1.05
PBRM1-219ENST00000462207 FHOD3Q2V2M9 1422 aa21.59■■□□□ 1.05
PBRM1-219ENST00000462207 CARMIL2Q6F5E8 1435 aa21.53■■□□□ 1.04
PBRM1-219ENST00000462207 TTBK1Q5TCY1 1321 aaPredicted RBP21.48■■□□□ 1.03
PBRM1-219ENST00000462207 ARHGEF11O15085 1522 aa21.44■■□□□ 1.02
PBRM1-219ENST00000462207 VPS8Q8N3P4 1428 aa21.44■■□□□ 1.02
PBRM1-219ENST00000462207 PCF11O94913 1555 aaKnown RBP21.4■■□□□ 1.02
PBRM1-219ENST00000462207 FMN1Q68DA7 1419 aa21.39■■□□□ 1.02
PBRM1-219ENST00000462207 PTPRGP23470 1445 aa21.39■■□□□ 1.01
PBRM1-219ENST00000462207 RIMBP3CA6NJZ7 1639 aa21.38■■□□□ 1.01
PBRM1-219ENST00000462207 RIMBP3BA6NNM3 1639 aa21.38■■□□□ 1.01
PBRM1-219ENST00000462207 RIMBP3Q9UFD9 1639 aa21.38■■□□□ 1.01
PBRM1-219ENST00000462207 PLB1Q6P1J6 1458 aa21.36■■□□□ 1.01
PBRM1-219ENST00000462207 ABCA8O94911 1581 aa21.32■■□□□ 1
PBRM1-219ENST00000462207 RAPGEF6Q8TEU7 1601 aa21.32■■□□□ 1
PBRM1-219ENST00000462207 CASKIN1Q8WXD9 1431 aa21.32■■□□□ 1
PBRM1-219ENST00000462207 FYCO1Q9BQS8 1478 aa21.31■■□□□ 1
PBRM1-219ENST00000462207 ATP1B4Q9UN42 357 aaPredicted RBP21.28■■□□□ 1
PBRM1-219ENST00000462207 HECW1Q76N89 1606 aa21.28■■□□□ 1
PBRM1-219ENST00000462207 LRRIQ1Q96JM4 1722 aa21.27■■□□□ 1
PBRM1-219ENST00000462207 UACAQ9BZF9 1416 aa21.27■■□□□ 1
PBRM1-219ENST00000462207 NUP153P49790 1475 aaKnown RBP21.26■□□□□ 0.99
PBRM1-219ENST00000462207 ARID3CA6NKF2 412 aa21.25■□□□□ 0.99
PBRM1-219ENST00000462207 ABCC2Q92887 1545 aa21.24■□□□□ 0.99
PBRM1-219ENST00000462207 ADCY10Q96PN6 1610 aa21.23■□□□□ 0.99
PBRM1-219ENST00000462207 CDK13Q14004 1512 aaKnown RBP21.22■□□□□ 0.99
PBRM1-219ENST00000462207 EPRSP07814 1512 aaKnown RBP21.2■□□□□ 0.98
PBRM1-219ENST00000462207 UHRF1BP1LA0JNW5 1464 aa21.2■□□□□ 0.98
PBRM1-219ENST00000462207 CYB5RLQ6IPT4 315 aa21.19■□□□□ 0.98
PBRM1-219ENST00000462207 CFAP43Q8NDM7 1665 aa21.19■□□□□ 0.98
PBRM1-219ENST00000462207 DNAJC5Q9H3Z4 198 aa21.17■□□□□ 0.98
PBRM1-219ENST00000462207 TIAM1Q13009 1591 aa21.17■□□□□ 0.98
PBRM1-219ENST00000462207 CCDC18Q5T9S5 1454 aa21.16■□□□□ 0.98
PBRM1-219ENST00000462207 ATP10BO94823 1461 aa21.14■□□□□ 0.98
PBRM1-219ENST00000462207 PPARGC1BQ86YN6 1023 aaKnown RBP21.13■□□□□ 0.97
PBRM1-219ENST00000462207 ZCCHC11Q5TAX3 1644 aaKnown RBP21.13■□□□□ 0.97
PBRM1-219ENST00000462207 APLP2Q06481 763 aa21.12■□□□□ 0.97
PBRM1-219ENST00000462207 KDM5BQ9UGL1 1544 aa21.11■□□□□ 0.97
PBRM1-219ENST00000462207 MAP3K1Q13233 1512 aa21.11■□□□□ 0.97
PBRM1-219ENST00000462207 MAGI3Q5TCQ9 1506 aa21.1■□□□□ 0.97
PBRM1-219ENST00000462207 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.1■□□□□ 0.97
PBRM1-219ENST00000462207 HNRNPUL2Q1KMD3 747 aaKnown RBP21.1■□□□□ 0.97
PBRM1-219ENST00000462207 KANK4Q5T7N3 995 aaPredicted RBP21.1■□□□□ 0.97
PBRM1-219ENST00000462207 LRRC9Q6ZRR7 1453 aa21.06■□□□□ 0.96
PBRM1-219ENST00000462207 MTUS2Q5JR59 1369 aa21.02■□□□□ 0.95
PBRM1-219ENST00000462207 EHBP1L1Q8N3D4 1523 aa21.02■□□□□ 0.95
PBRM1-219ENST00000462207 TROQ12816 1431 aaPredicted RBP20.98■□□□□ 0.95
PBRM1-219ENST00000462207 NPM1P06748 294 aaKnown RBP eCLIP20.98■□□□□ 0.95
PBRM1-219ENST00000462207 CDK11AQ9UQ88 783 aaPredicted RBP20.96■□□□□ 0.95
PBRM1-219ENST00000462207 ASXL2Q76L83 1435 aa20.96■□□□□ 0.95
PBRM1-219ENST00000462207 KIF14Q15058 1648 aa20.96■□□□□ 0.95
PBRM1-219ENST00000462207 PLEKHD1A6NEE1 506 aa20.96■□□□□ 0.95
PBRM1-219ENST00000462207 WDR7Q9Y4E6 1490 aa20.94■□□□□ 0.94
PBRM1-219ENST00000462207 MAPKBP1O60336 1514 aa20.92■□□□□ 0.94
PBRM1-219ENST00000462207 SUPT6HQ7KZ85 1726 aaKnown RBP20.92■□□□□ 0.94
PBRM1-219ENST00000462207 NCOA2Q15596 1464 aa20.91■□□□□ 0.94
PBRM1-219ENST00000462207 KCNH8Q96L42 1107 aa20.88■□□□□ 0.93
PBRM1-219ENST00000462207 PHLDB1Q86UU1 1377 aa20.86■□□□□ 0.93
PBRM1-219ENST00000462207 TTC37Q6PGP7 1564 aa20.86■□□□□ 0.93
PBRM1-219ENST00000462207 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.85■□□□□ 0.93
PBRM1-219ENST00000462207 ABCC10Q5T3U5 1492 aa20.85■□□□□ 0.93
PBRM1-219ENST00000462207 DIP2BQ9P265 1576 aa20.78■□□□□ 0.92
PBRM1-219ENST00000462207 ABCA9Q8IUA7 1624 aa20.78■□□□□ 0.92
PBRM1-219ENST00000462207 CCNB3Q8WWL7 1395 aa20.78■□□□□ 0.92
PBRM1-219ENST00000462207 CDC42BPAQ5VT25 1732 aa20.77■□□□□ 0.92
PBRM1-219ENST00000462207 MYOM3Q5VTT5 1437 aa20.77■□□□□ 0.92
PBRM1-219ENST00000462207 GPATCH8Q9UKJ3 1502 aaKnown RBP20.77■□□□□ 0.91
PBRM1-219ENST00000462207 ITSN2Q9NZM3 1697 aa20.75■□□□□ 0.91
PBRM1-219ENST00000462207 PREX2Q70Z35 1606 aa20.74■□□□□ 0.91
PBRM1-219ENST00000462207 MYO5CQ9NQX4 1742 aa20.74■□□□□ 0.91
PBRM1-219ENST00000462207 FGD6Q6ZV73 1430 aa20.73■□□□□ 0.91
PBRM1-219ENST00000462207 GLI2P10070 1586 aa20.72■□□□□ 0.91
PBRM1-219ENST00000462207 CDC42BPBQ9Y5S2 1711 aa20.71■□□□□ 0.91
PBRM1-219ENST00000462207 KIF13AQ9H1H9 1805 aa20.7■□□□□ 0.9
PBRM1-219ENST00000462207 FAM69CQ0P6D2 419 aa20.7■□□□□ 0.9
PBRM1-219ENST00000462207 RRBP1Q9P2E9 1410 aaKnown RBP20.69■□□□□ 0.9
PBRM1-219ENST00000462207 MAP3K4Q9Y6R4 1608 aa20.69■□□□□ 0.9
PBRM1-219ENST00000462207 ARHGAP5Q13017 1502 aa20.68■□□□□ 0.9
PBRM1-219ENST00000462207 PTPN23Q9H3S7 1636 aa20.68■□□□□ 0.9
PBRM1-219ENST00000462207 PLCH2O75038 1416 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms