RNA–Protein interactions for RNA: ENST00000462146.6

PDZRN3-203, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-203ENST00000462146 PHLDB1Q86UU1 1377 aa16.85■□□□□ 0.29
PDZRN3-203ENST00000462146 DDX10Q13206 875 aaKnown RBP16.83■□□□□ 0.29
PDZRN3-203ENST00000462146 SETD5Q9C0A6 1442 aa16.83■□□□□ 0.29
PDZRN3-203ENST00000462146 IGF1RP08069 1367 aa16.83■□□□□ 0.28
PDZRN3-203ENST00000462146 PRDM2Q13029 1718 aa16.83■□□□□ 0.28
PDZRN3-203ENST00000462146 LRRC9Q6ZRR7 1453 aa16.82■□□□□ 0.28
PDZRN3-203ENST00000462146 FAM50AQ14320 339 aaKnown RBP16.81■□□□□ 0.28
PDZRN3-203ENST00000462146 HIRIP3Q9BW71 556 aaPredicted RBP16.8■□□□□ 0.28
PDZRN3-203ENST00000462146 PCF11O94913 1555 aaKnown RBP16.78■□□□□ 0.28
PDZRN3-203ENST00000462146 MAP3K1Q13233 1512 aa16.78■□□□□ 0.28
PDZRN3-203ENST00000462146 P3H3Q8IVL6 736 aa16.78■□□□□ 0.28
PDZRN3-203ENST00000462146 CFAP43Q8NDM7 1665 aa16.77■□□□□ 0.28
PDZRN3-203ENST00000462146 CARMIL1Q5VZK9 1371 aa16.76■□□□□ 0.27
PDZRN3-203ENST00000462146 FKBP8Q14318 412 aa16.75■□□□□ 0.27
PDZRN3-203ENST00000462146 ATP1B4Q9UN42 357 aaPredicted RBP16.74■□□□□ 0.27
PDZRN3-203ENST00000462146 FGD5Q6ZNL6 1462 aa16.74■□□□□ 0.27
PDZRN3-203ENST00000462146 PPP1R15AO75807 674 aaPredicted RBP16.72■□□□□ 0.27
PDZRN3-203ENST00000462146 FHOD3Q2V2M9 1422 aa16.68■□□□□ 0.26
PDZRN3-203ENST00000462146 TRIM52Q96A61 297 aa16.68■□□□□ 0.26
PDZRN3-203ENST00000462146 ANP32EQ9BTT0 268 aa16.67■□□□□ 0.26
PDZRN3-203ENST00000462146 FHAD1B1AJZ9 1412 aa16.67■□□□□ 0.26
PDZRN3-203ENST00000462146 CADPSQ9ULU8 1353 aa16.62■□□□□ 0.25
PDZRN3-203ENST00000462146 LAMC3Q9Y6N6 1575 aa16.6■□□□□ 0.25
PDZRN3-203ENST00000462146 ANP32CO43423 234 aa16.59■□□□□ 0.25
PDZRN3-203ENST00000462146 FYCO1Q9BQS8 1478 aa16.59■□□□□ 0.25
PDZRN3-203ENST00000462146 RAD54L2Q9Y4B4 1467 aa16.59■□□□□ 0.25
PDZRN3-203ENST00000462146 NESP48681 1621 aa16.58■□□□□ 0.24
PDZRN3-203ENST00000462146 CCER2I3L3R5 266 aa16.57■□□□□ 0.24
PDZRN3-203ENST00000462146 TIMELESSQ9UNS1 1208 aa16.57■□□□□ 0.24
PDZRN3-203ENST00000462146 NEFLP07196 543 aa16.56■□□□□ 0.24
PDZRN3-203ENST00000462146 CCDC18Q5T9S5 1454 aa16.56■□□□□ 0.24
PDZRN3-203ENST00000462146 CTTNBP2Q8WZ74 1663 aa16.55■□□□□ 0.24
PDZRN3-203ENST00000462146 PTPRKQ15262 1439 aa16.55■□□□□ 0.24
PDZRN3-203ENST00000462146 CASKIN1Q8WXD9 1431 aa16.55■□□□□ 0.24
PDZRN3-203ENST00000462146 TONSLQ96HA7 1378 aa16.55■□□□□ 0.24
PDZRN3-203ENST00000462146 LRRIQ1Q96JM4 1722 aa16.55■□□□□ 0.24
PDZRN3-203ENST00000462146 FGD6Q6ZV73 1430 aa16.54■□□□□ 0.24
PDZRN3-203ENST00000462146 RBM19Q9Y4C8 960 aaKnown RBP16.54■□□□□ 0.24
PDZRN3-203ENST00000462146 EFCAB5A4FU69 1503 aa16.52■□□□□ 0.24
PDZRN3-203ENST00000462146 FANCD2Q9BXW9 1451 aa16.52■□□□□ 0.23
PDZRN3-203ENST00000462146 PTPN23Q9H3S7 1636 aa16.52■□□□□ 0.23
PDZRN3-203ENST00000462146 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.51■□□□□ 0.23
PDZRN3-203ENST00000462146 AQRO60306 1485 aaKnown RBP eCLIP16.49■□□□□ 0.23
PDZRN3-203ENST00000462146 SNAPC4Q5SXM2 1469 aa16.49■□□□□ 0.23
PDZRN3-203ENST00000462146 POLA1P09884 1462 aaPredicted RBP16.48■□□□□ 0.23
PDZRN3-203ENST00000462146 ABCA10Q8WWZ4 1543 aa16.48■□□□□ 0.23
PDZRN3-203ENST00000462146 UACAQ9BZF9 1416 aa16.47■□□□□ 0.23
PDZRN3-203ENST00000462146 KDM5BQ9UGL1 1544 aa16.47■□□□□ 0.23
PDZRN3-203ENST00000462146 DNMBPQ6XZF7 1577 aa16.47■□□□□ 0.23
PDZRN3-203ENST00000462146 HFM1A2PYH4 1435 aa16.47■□□□□ 0.23
PDZRN3-203ENST00000462146 MTUS2Q5JR59 1369 aa16.46■□□□□ 0.23
PDZRN3-203ENST00000462146 CUL7Q14999 1698 aa16.46■□□□□ 0.23
PDZRN3-203ENST00000462146 IRX6P78412 446 aaPredicted RBP16.46■□□□□ 0.22
PDZRN3-203ENST00000462146 TOPBP1Q92547 1522 aa16.45■□□□□ 0.22
PDZRN3-203ENST00000462146 PDS5BQ9NTI5 1447 aa16.45■□□□□ 0.22
PDZRN3-203ENST00000462146 NAIPQ13075 1403 aa16.44■□□□□ 0.22
PDZRN3-203ENST00000462146 FMN1Q68DA7 1419 aa16.43■□□□□ 0.22
PDZRN3-203ENST00000462146 HNRNPUQ00839 825 aaKnown RBP eCLIP16.42■□□□□ 0.22
PDZRN3-203ENST00000462146 NCOA2Q15596 1464 aa16.42■□□□□ 0.22
PDZRN3-203ENST00000462146 KIF21AQ7Z4S6 1674 aa16.42■□□□□ 0.22
PDZRN3-203ENST00000462146 MYOM3Q5VTT5 1437 aa16.39■□□□□ 0.21
PDZRN3-203ENST00000462146 MSH5O43196 834 aa16.39■□□□□ 0.21
PDZRN3-203ENST00000462146 SAMD9Q5K651 1589 aa16.39■□□□□ 0.21
PDZRN3-203ENST00000462146 SUPT6HQ7KZ85 1726 aaKnown RBP16.38■□□□□ 0.21
PDZRN3-203ENST00000462146 WASHC2AQ641Q2 1341 aa16.38■□□□□ 0.21
PDZRN3-203ENST00000462146 RRP7BPQ9NSQ0 103 aa16.37■□□□□ 0.21
PDZRN3-203ENST00000462146 GRIN2BQ13224 1484 aa16.37■□□□□ 0.21
PDZRN3-203ENST00000462146 CHIC2Q9UKJ5 165 aa16.36■□□□□ 0.21
PDZRN3-203ENST00000462146 KDM6BO15054 1643 aa16.36■□□□□ 0.21
PDZRN3-203ENST00000462146 DENND4BO75064 1496 aaPredicted RBP16.36■□□□□ 0.21
PDZRN3-203ENST00000462146 MAGI3Q5TCQ9 1506 aa16.36■□□□□ 0.21
PDZRN3-203ENST00000462146 HSPA5P11021 654 aaKnown RBP16.36■□□□□ 0.21
PDZRN3-203ENST00000462146 ERCC6Q03468 1493 aa16.35■□□□□ 0.21
PDZRN3-203ENST00000462146 CCDC184Q52MB2 194 aa16.35■□□□□ 0.21
PDZRN3-203ENST00000462146 BCL11AQ9H165 835 aa16.34■□□□□ 0.21
PDZRN3-203ENST00000462146 TDRD9Q8NDG6 1382 aaKnown RBP16.33■□□□□ 0.2
PDZRN3-203ENST00000462146 EHBP1L1Q8N3D4 1523 aa16.32■□□□□ 0.2
PDZRN3-203ENST00000462146 UGGT2Q9NYU1 1516 aa16.32■□□□□ 0.2
PDZRN3-203ENST00000462146 GCC2Q8IWJ2 1684 aa16.32■□□□□ 0.2
PDZRN3-203ENST00000462146 HECW1Q76N89 1606 aa16.31■□□□□ 0.2
PDZRN3-203ENST00000462146 URB2Q14146 1524 aaKnown RBP16.3■□□□□ 0.2
PDZRN3-203ENST00000462146 ABCA5Q8WWZ7 1642 aa16.3■□□□□ 0.2
PDZRN3-203ENST00000462146 FOXD1Q16676 465 aa16.29■□□□□ 0.2
PDZRN3-203ENST00000462146 ARHGEF11O15085 1522 aa16.28■□□□□ 0.2
PDZRN3-203ENST00000462146 C11orf95C9JLR9 678 aaPredicted RBP16.28■□□□□ 0.2
PDZRN3-203ENST00000462146 THOC2Q8NI27 1593 aaKnown RBP16.28■□□□□ 0.2
PDZRN3-203ENST00000462146 MRC2Q9UBG0 1479 aa16.27■□□□□ 0.2
PDZRN3-203ENST00000462146 CNTLNQ9NXG0 1405 aa16.26■□□□□ 0.19
PDZRN3-203ENST00000462146 GAPVD1Q14C86 1478 aa16.25■□□□□ 0.19
PDZRN3-203ENST00000462146 EIF4G2P78344 907 aaKnown RBP eCLIP16.25■□□□□ 0.19
PDZRN3-203ENST00000462146 CDK11AQ9UQ88 783 aaPredicted RBP16.25■□□□□ 0.19
PDZRN3-203ENST00000462146 L3MBTL2Q969R5 705 aa16.24■□□□□ 0.19
PDZRN3-203ENST00000462146 ARID3CA6NKF2 412 aa16.23■□□□□ 0.19
PDZRN3-203ENST00000462146 FAM9BQ8IZU0 186 aa16.23■□□□□ 0.19
PDZRN3-203ENST00000462146 TCOF1Q13428 1488 aaKnown RBP16.23■□□□□ 0.19
PDZRN3-203ENST00000462146 WDR62O43379 1518 aa16.22■□□□□ 0.19
PDZRN3-203ENST00000462146 MPHOSPH9Q99550 1183 aa16.22■□□□□ 0.19
PDZRN3-203ENST00000462146 FANCIQ9NVI1 1328 aa16.21■□□□□ 0.19
PDZRN3-203ENST00000462146 CDK13Q14004 1512 aaKnown RBP16.21■□□□□ 0.18
PDZRN3-203ENST00000462146 PRKRIP1Q9H875 184 aaPredicted RBP16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms