RNA–Protein interactions for RNA: ENST00000461869.5

SF3A3-203, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 3

Gene SF3A3, Length 776 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-203ENST00000461869 KIF13AQ9H1H9 1805 aa26.95■■□□□ 1.91
SF3A3-203ENST00000461869 NPM1P06748 294 aaKnown RBP eCLIP26.95■■□□□ 1.9
SF3A3-203ENST00000461869 FAM69CQ0P6D2 419 aa26.91■■□□□ 1.9
SF3A3-203ENST00000461869 ABCC10Q5T3U5 1492 aa26.87■■□□□ 1.89
SF3A3-203ENST00000461869 IGF1RP08069 1367 aa26.86■■□□□ 1.89
SF3A3-203ENST00000461869 KIAA0586Q9BVV6 1533 aa26.85■■□□□ 1.89
SF3A3-203ENST00000461869 MAPKBP1O60336 1514 aa26.83■■□□□ 1.89
SF3A3-203ENST00000461869 KIF27Q86VH2 1401 aa26.82■■□□□ 1.88
SF3A3-203ENST00000461869 ADCY10Q96PN6 1610 aa26.8■■□□□ 1.88
SF3A3-203ENST00000461869 CUL7Q14999 1698 aa26.76■■□□□ 1.87
SF3A3-203ENST00000461869 DIP2BQ9P265 1576 aa26.75■■□□□ 1.87
SF3A3-203ENST00000461869 PTPRGP23470 1445 aa26.68■■□□□ 1.86
SF3A3-203ENST00000461869 CARMIL1Q5VZK9 1371 aa26.68■■□□□ 1.86
SF3A3-203ENST00000461869 TTBK1Q5TCY1 1321 aaPredicted RBP26.66■■□□□ 1.86
SF3A3-203ENST00000461869 KDM6BO15054 1643 aa26.61■■□□□ 1.85
SF3A3-203ENST00000461869 CARMIL2Q6F5E8 1435 aa26.61■■□□□ 1.85
SF3A3-203ENST00000461869 TNIKQ9UKE5 1360 aa26.59■■□□□ 1.85
SF3A3-203ENST00000461869 TSPOAP1O95153 1857 aa26.57■■□□□ 1.84
SF3A3-203ENST00000461869 ABCC2Q92887 1545 aa26.54■■□□□ 1.84
SF3A3-203ENST00000461869 KDM4FA0A1W2PPD8 638 aa26.52■■□□□ 1.84
SF3A3-203ENST00000461869 IQGAP2Q13576 1575 aa26.52■■□□□ 1.84
SF3A3-203ENST00000461869 ASXL2Q76L83 1435 aa26.49■■□□□ 1.83
SF3A3-203ENST00000461869 PLB1Q6P1J6 1458 aa26.48■■□□□ 1.83
SF3A3-203ENST00000461869 UHRF1BP1LA0JNW5 1464 aa26.46■■□□□ 1.83
SF3A3-203ENST00000461869 UACAQ9BZF9 1416 aa26.45■■□□□ 1.82
SF3A3-203ENST00000461869 DISP1Q96F81 1524 aa26.43■■□□□ 1.82
SF3A3-203ENST00000461869 GLI2P10070 1586 aa26.42■■□□□ 1.82
SF3A3-203ENST00000461869 RAPGEF2Q9Y4G8 1499 aa26.39■■□□□ 1.82
SF3A3-203ENST00000461869 UGGT2Q9NYU1 1516 aa26.35■■□□□ 1.81
SF3A3-203ENST00000461869 PPRC1Q5VV67 1664 aaKnown RBP26.35■■□□□ 1.81
SF3A3-203ENST00000461869 KDM5BQ9UGL1 1544 aa26.34■■□□□ 1.81
SF3A3-203ENST00000461869 EPRSP07814 1512 aaKnown RBP26.31■■□□□ 1.8
SF3A3-203ENST00000461869 KIAA0556O60303 1618 aa26.28■■□□□ 1.8
SF3A3-203ENST00000461869 ZCCHC11Q5TAX3 1644 aaKnown RBP26.26■■□□□ 1.79
SF3A3-203ENST00000461869 COL17A1Q9UMD9 1497 aaPredicted RBP26.26■■□□□ 1.79
SF3A3-203ENST00000461869 MAP3K4Q9Y6R4 1608 aa26.25■■□□□ 1.79
SF3A3-203ENST00000461869 TEX14Q8IWB6 1497 aa26.23■■□□□ 1.79
SF3A3-203ENST00000461869 ADGRL1O94910 1474 aa26.22■■□□□ 1.79
SF3A3-203ENST00000461869 WDR7Q9Y4E6 1490 aa26.17■■□□□ 1.78
SF3A3-203ENST00000461869 GOLGA3Q08378 1498 aa26.14■■□□□ 1.78
SF3A3-203ENST00000461869 CTTNBP2Q8WZ74 1663 aa26.12■■□□□ 1.77
SF3A3-203ENST00000461869 KCNH8Q96L42 1107 aa26.1■■□□□ 1.77
SF3A3-203ENST00000461869 CD109Q6YHK3 1445 aa26.07■■□□□ 1.76
SF3A3-203ENST00000461869 ABCA8O94911 1581 aa26.07■■□□□ 1.76
SF3A3-203ENST00000461869 PRXQ9BXM0 1461 aa26.04■■□□□ 1.76
SF3A3-203ENST00000461869 MAGI3Q5TCQ9 1506 aa26.04■■□□□ 1.76
SF3A3-203ENST00000461869 CFAP43Q8NDM7 1665 aa26■■□□□ 1.75
SF3A3-203ENST00000461869 ILDR1Q86SU0 546 aaPredicted RBP26■■□□□ 1.75
SF3A3-203ENST00000461869 FAM9AQ8IZU1 332 aaPredicted RBP25.98■■□□□ 1.75
SF3A3-203ENST00000461869 ARID3CA6NKF2 412 aa25.94■■□□□ 1.74
SF3A3-203ENST00000461869 P3H3Q8IVL6 736 aa25.94■■□□□ 1.74
SF3A3-203ENST00000461869 HECW2Q9P2P5 1572 aa25.92■■□□□ 1.74
SF3A3-203ENST00000461869 ATP10BO94823 1461 aa25.89■■□□□ 1.73
SF3A3-203ENST00000461869 ARAP3Q8WWN8 1544 aa25.84■■□□□ 1.73
SF3A3-203ENST00000461869 CSRNP3Q8WYN3 585 aa25.82■■□□□ 1.72
SF3A3-203ENST00000461869 CHIC1Q5VXU3 224 aa25.81■■□□□ 1.72
SF3A3-203ENST00000461869 KIF21BO75037 1637 aa25.81■■□□□ 1.72
SF3A3-203ENST00000461869 PHLDB1Q86UU1 1377 aa25.78■■□□□ 1.72
SF3A3-203ENST00000461869 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.77■■□□□ 1.72
SF3A3-203ENST00000461869 HNRNPUL2Q1KMD3 747 aaKnown RBP25.77■■□□□ 1.72
SF3A3-203ENST00000461869 ABCA9Q8IUA7 1624 aa25.77■■□□□ 1.72
SF3A3-203ENST00000461869 SAMD9Q5K651 1589 aa25.75■■□□□ 1.71
SF3A3-203ENST00000461869 RAPGEF6Q8TEU7 1601 aa25.74■■□□□ 1.71
SF3A3-203ENST00000461869 RAPGEF3O95398 923 aa25.73■■□□□ 1.71
SF3A3-203ENST00000461869 RANGAP1P46060 587 aaPredicted RBP25.7■■□□□ 1.7
SF3A3-203ENST00000461869 NEO1Q92859 1461 aa25.69■■□□□ 1.7
SF3A3-203ENST00000461869 NUP153P49790 1475 aaKnown RBP25.65■■□□□ 1.7
SF3A3-203ENST00000461869 PTPRMP28827 1452 aa25.62■■□□□ 1.69
SF3A3-203ENST00000461869 FHOD3Q2V2M9 1422 aa25.62■■□□□ 1.69
SF3A3-203ENST00000461869 ADAMTSL3P82987 1691 aa25.61■■□□□ 1.69
SF3A3-203ENST00000461869 PLEKHD1A6NEE1 506 aa25.61■■□□□ 1.69
SF3A3-203ENST00000461869 EEA1Q15075 1411 aa25.61■■□□□ 1.69
SF3A3-203ENST00000461869 ARID4BQ4LE39 1312 aaPredicted RBP25.61■■□□□ 1.69
SF3A3-203ENST00000461869 FRMPD1Q5SYB0 1578 aa25.58■■□□□ 1.69
SF3A3-203ENST00000461869 BCORL1Q5H9F3 1711 aa25.53■■□□□ 1.68
SF3A3-203ENST00000461869 DENND4BO75064 1496 aaPredicted RBP25.53■■□□□ 1.68
SF3A3-203ENST00000461869 AKNAQ7Z591 1439 aa25.51■■□□□ 1.67
SF3A3-203ENST00000461869 FANCAO15360 1455 aa25.49■■□□□ 1.67
SF3A3-203ENST00000461869 MADDQ8WXG6 1647 aa25.48■■□□□ 1.67
SF3A3-203ENST00000461869 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.47■■□□□ 1.67
SF3A3-203ENST00000461869 FBXO41Q8TF61 875 aa25.47■■□□□ 1.67
SF3A3-203ENST00000461869 ARHGEF40Q8TER5 1519 aa25.47■■□□□ 1.67
SF3A3-203ENST00000461869 EFCAB5A4FU69 1503 aa25.46■■□□□ 1.67
SF3A3-203ENST00000461869 RICTORQ6R327 1708 aa25.45■■□□□ 1.66
SF3A3-203ENST00000461869 CFAP74Q9C0B2 1584 aa25.44■■□□□ 1.66
SF3A3-203ENST00000461869 PCF11O94913 1555 aaKnown RBP25.42■■□□□ 1.66
SF3A3-203ENST00000461869 TTC37Q6PGP7 1564 aa25.41■■□□□ 1.66
SF3A3-203ENST00000461869 LMTK3Q96Q04 1460 aa25.4■■□□□ 1.66
SF3A3-203ENST00000461869 RIMS1Q86UR5 1692 aaKnown RBP25.39■■□□□ 1.66
SF3A3-203ENST00000461869 POGZQ7Z3K3 1410 aa25.38■■□□□ 1.65
SF3A3-203ENST00000461869 CDK13Q14004 1512 aaKnown RBP25.37■■□□□ 1.65
SF3A3-203ENST00000461869 PLPPR3Q6T4P5 718 aa25.37■■□□□ 1.65
SF3A3-203ENST00000461869 ZMYM4Q5VZL5 1548 aa25.37■■□□□ 1.65
SF3A3-203ENST00000461869 ZFYVE16Q7Z3T8 1539 aa25.36■■□□□ 1.65
SF3A3-203ENST00000461869 YEATS2Q9ULM3 1422 aa25.36■■□□□ 1.65
SF3A3-203ENST00000461869 MAGI2Q86UL8 1455 aa25.34■■□□□ 1.65
SF3A3-203ENST00000461869 ATP1B4Q9UN42 357 aaPredicted RBP25.34■■□□□ 1.65
SF3A3-203ENST00000461869 PLCH2O75038 1416 aa25.33■■□□□ 1.65
SF3A3-203ENST00000461869 EHMT2Q96KQ7 1210 aa25.33■■□□□ 1.65
SF3A3-203ENST00000461869 SCAPERQ9BY12 1400 aa25.32■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms