RNA–Protein interactions for RNA: ENST00000461099.1

HMG20B-207, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 687 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-207ENST00000461099 KIF13AQ9H1H9 1805 aa38.64■■■■□ 3.78
HMG20B-207ENST00000461099 IGF1RP08069 1367 aa38.62■■■■□ 3.77
HMG20B-207ENST00000461099 KIF27Q86VH2 1401 aa38.58■■■■□ 3.77
HMG20B-207ENST00000461099 NPM1P06748 294 aaKnown RBP eCLIP38.57■■■■□ 3.76
HMG20B-207ENST00000461099 KIAA0586Q9BVV6 1533 aa38.56■■■■□ 3.76
HMG20B-207ENST00000461099 CUL7Q14999 1698 aa38.49■■■■□ 3.75
HMG20B-207ENST00000461099 FAM69CQ0P6D2 419 aa38.49■■■■□ 3.75
HMG20B-207ENST00000461099 ABCC10Q5T3U5 1492 aa38.48■■■■□ 3.75
HMG20B-207ENST00000461099 ADCY10Q96PN6 1610 aa38.45■■■■□ 3.75
HMG20B-207ENST00000461099 MAPKBP1O60336 1514 aa38.45■■■■□ 3.75
HMG20B-207ENST00000461099 CARMIL1Q5VZK9 1371 aa38.35■■■■□ 3.73
HMG20B-207ENST00000461099 DIP2BQ9P265 1576 aa38.34■■■■□ 3.73
HMG20B-207ENST00000461099 PTPRGP23470 1445 aa38.27■■■■□ 3.72
HMG20B-207ENST00000461099 CARMIL2Q6F5E8 1435 aa38.2■■■■□ 3.71
HMG20B-207ENST00000461099 TTBK1Q5TCY1 1321 aaPredicted RBP38.18■■■■□ 3.7
HMG20B-207ENST00000461099 TNIKQ9UKE5 1360 aa38.17■■■■□ 3.7
HMG20B-207ENST00000461099 IQGAP2Q13576 1575 aa38.12■■■■□ 3.69
HMG20B-207ENST00000461099 TSPOAP1O95153 1857 aa38.09■■■■□ 3.69
HMG20B-207ENST00000461099 KDM6BO15054 1643 aa38.08■■■■□ 3.69
HMG20B-207ENST00000461099 ABCC2Q92887 1545 aa38.07■■■■□ 3.69
HMG20B-207ENST00000461099 UHRF1BP1LA0JNW5 1464 aa37.98■■■■□ 3.67
HMG20B-207ENST00000461099 DISP1Q96F81 1524 aa37.97■■■■□ 3.67
HMG20B-207ENST00000461099 ASXL2Q76L83 1435 aa37.97■■■■□ 3.67
HMG20B-207ENST00000461099 PLB1Q6P1J6 1458 aa37.96■■■■□ 3.67
HMG20B-207ENST00000461099 RAPGEF2Q9Y4G8 1499 aa37.96■■■■□ 3.67
HMG20B-207ENST00000461099 UACAQ9BZF9 1416 aa37.95■■■■□ 3.67
HMG20B-207ENST00000461099 GLI2P10070 1586 aa37.89■■■■□ 3.66
HMG20B-207ENST00000461099 UGGT2Q9NYU1 1516 aa37.88■■■■□ 3.65
HMG20B-207ENST00000461099 KDM4FA0A1W2PPD8 638 aa37.88■■■■□ 3.65
HMG20B-207ENST00000461099 KDM5BQ9UGL1 1544 aa37.81■■■■□ 3.64
HMG20B-207ENST00000461099 PPRC1Q5VV67 1664 aaKnown RBP37.8■■■■□ 3.64
HMG20B-207ENST00000461099 KIAA0556O60303 1618 aa37.76■■■■□ 3.64
HMG20B-207ENST00000461099 EPRSP07814 1512 aaKnown RBP37.73■■■■□ 3.63
HMG20B-207ENST00000461099 ZCCHC11Q5TAX3 1644 aaKnown RBP37.7■■■■□ 3.63
HMG20B-207ENST00000461099 MAP3K4Q9Y6R4 1608 aa37.65■■■■□ 3.62
HMG20B-207ENST00000461099 COL17A1Q9UMD9 1497 aaPredicted RBP37.61■■■■□ 3.61
HMG20B-207ENST00000461099 CTTNBP2Q8WZ74 1663 aa37.6■■■■□ 3.61
HMG20B-207ENST00000461099 TEX14Q8IWB6 1497 aa37.6■■■■□ 3.61
HMG20B-207ENST00000461099 GOLGA3Q08378 1498 aa37.57■■■■□ 3.6
HMG20B-207ENST00000461099 WDR7Q9Y4E6 1490 aa37.55■■■■□ 3.6
HMG20B-207ENST00000461099 PRXQ9BXM0 1461 aa37.5■■■■□ 3.59
HMG20B-207ENST00000461099 ADGRL1O94910 1474 aa37.47■■■■□ 3.59
HMG20B-207ENST00000461099 ABCA8O94911 1581 aa37.46■■■■□ 3.59
HMG20B-207ENST00000461099 KCNH8Q96L42 1107 aa37.4■■■■□ 3.58
HMG20B-207ENST00000461099 CD109Q6YHK3 1445 aa37.38■■■■□ 3.57
HMG20B-207ENST00000461099 MAGI3Q5TCQ9 1506 aa37.35■■■■□ 3.57
HMG20B-207ENST00000461099 CFAP43Q8NDM7 1665 aa37.33■■■■□ 3.57
HMG20B-207ENST00000461099 FAM9AQ8IZU1 332 aaPredicted RBP37.29■■■■□ 3.56
HMG20B-207ENST00000461099 P3H3Q8IVL6 736 aa37.24■■■■□ 3.55
HMG20B-207ENST00000461099 ARID3CA6NKF2 412 aa37.18■■■■□ 3.54
HMG20B-207ENST00000461099 CSRNP3Q8WYN3 585 aa37.18■■■■□ 3.54
HMG20B-207ENST00000461099 ATP10BO94823 1461 aa37.18■■■■□ 3.54
HMG20B-207ENST00000461099 ARAP3Q8WWN8 1544 aa37.07■■■■□ 3.53
HMG20B-207ENST00000461099 SAMD9Q5K651 1589 aa37.07■■■■□ 3.52
HMG20B-207ENST00000461099 HECW2Q9P2P5 1572 aa37.03■■■■□ 3.52
HMG20B-207ENST00000461099 ABCA9Q8IUA7 1624 aa37.01■■■■□ 3.52
HMG20B-207ENST00000461099 RAPGEF6Q8TEU7 1601 aa36.99■■■■□ 3.51
HMG20B-207ENST00000461099 ILDR1Q86SU0 546 aaPredicted RBP36.99■■■■□ 3.51
HMG20B-207ENST00000461099 PHLDB1Q86UU1 1377 aa36.99■■■■□ 3.51
HMG20B-207ENST00000461099 KIF21BO75037 1637 aa36.96■■■■□ 3.51
HMG20B-207ENST00000461099 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP36.95■■■■□ 3.51
HMG20B-207ENST00000461099 HNRNPUL2Q1KMD3 747 aaKnown RBP36.95■■■■□ 3.51
HMG20B-207ENST00000461099 EEA1Q15075 1411 aa36.93■■■■□ 3.5
HMG20B-207ENST00000461099 RANGAP1P46060 587 aaPredicted RBP36.9■■■■□ 3.5
HMG20B-207ENST00000461099 NUP153P49790 1475 aaKnown RBP36.88■■■■□ 3.49
HMG20B-207ENST00000461099 RAPGEF3O95398 923 aa36.87■■■■□ 3.49
HMG20B-207ENST00000461099 NEO1Q92859 1461 aa36.87■■■■□ 3.49
HMG20B-207ENST00000461099 FHOD3Q2V2M9 1422 aa36.84■■■■□ 3.49
HMG20B-207ENST00000461099 PLEKHD1A6NEE1 506 aa36.76■■■■□ 3.48
HMG20B-207ENST00000461099 ADAMTSL3P82987 1691 aa36.7■■■■□ 3.47
HMG20B-207ENST00000461099 FRMPD1Q5SYB0 1578 aa36.7■■■■□ 3.47
HMG20B-207ENST00000461099 PTPRMP28827 1452 aa36.68■■■■□ 3.46
HMG20B-207ENST00000461099 EFCAB5A4FU69 1503 aa36.66■■■■□ 3.46
HMG20B-207ENST00000461099 ARID4BQ4LE39 1312 aaPredicted RBP36.63■■■■□ 3.45
HMG20B-207ENST00000461099 DENND4BO75064 1496 aaPredicted RBP36.61■■■■□ 3.45
HMG20B-207ENST00000461099 AKNAQ7Z591 1439 aa36.6■■■■□ 3.45
HMG20B-207ENST00000461099 BCORL1Q5H9F3 1711 aa36.59■■■■□ 3.45
HMG20B-207ENST00000461099 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP36.59■■■■□ 3.45
HMG20B-207ENST00000461099 FANCAO15360 1455 aa36.58■■■■□ 3.45
HMG20B-207ENST00000461099 RICTORQ6R327 1708 aa36.55■■■■□ 3.44
HMG20B-207ENST00000461099 CFAP74Q9C0B2 1584 aa36.55■■■■□ 3.44
HMG20B-207ENST00000461099 ARHGEF40Q8TER5 1519 aa36.53■■■■□ 3.44
HMG20B-207ENST00000461099 TTC37Q6PGP7 1564 aa36.51■■■■□ 3.44
HMG20B-207ENST00000461099 MADDQ8WXG6 1647 aa36.51■■■■□ 3.43
HMG20B-207ENST00000461099 CDK13Q14004 1512 aaKnown RBP36.49■■■■□ 3.43
HMG20B-207ENST00000461099 UBTFP17480 764 aaKnown RBP36.44■■■■□ 3.42
HMG20B-207ENST00000461099 EHMT2Q96KQ7 1210 aa36.42■■■■□ 3.42
HMG20B-207ENST00000461099 ZMYM4Q5VZL5 1548 aa36.42■■■■□ 3.42
HMG20B-207ENST00000461099 PLCH2O75038 1416 aa36.39■■■■□ 3.42
HMG20B-207ENST00000461099 ATP1B4Q9UN42 357 aaPredicted RBP36.38■■■■□ 3.41
HMG20B-207ENST00000461099 PCF11O94913 1555 aaKnown RBP36.37■■■■□ 3.41
HMG20B-207ENST00000461099 FMN1Q68DA7 1419 aa36.37■■■■□ 3.41
HMG20B-207ENST00000461099 POGZQ7Z3K3 1410 aa36.37■■■■□ 3.41
HMG20B-207ENST00000461099 RIMS1Q86UR5 1692 aaKnown RBP36.37■■■■□ 3.41
HMG20B-207ENST00000461099 ZFYVE16Q7Z3T8 1539 aa36.37■■■■□ 3.41
HMG20B-207ENST00000461099 MAGI2Q86UL8 1455 aa36.37■■■■□ 3.41
HMG20B-207ENST00000461099 YEATS2Q9ULM3 1422 aa36.36■■■■□ 3.41
HMG20B-207ENST00000461099 LMTK3Q96Q04 1460 aa36.34■■■■□ 3.41
HMG20B-207ENST00000461099 SCAPERQ9BY12 1400 aa36.34■■■■□ 3.41
HMG20B-207ENST00000461099 ARHGAP35Q9NRY4 1499 aa36.31■■■■□ 3.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms