RNA–Protein interactions for RNA: ENST00000461099.1

HMG20B-207, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 687 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-207ENST00000461099 NISCHQ9Y2I1 1504 aa55.29■■■■■ 6.44
HMG20B-207ENST00000461099 ABCC9O60706 1549 aa49.91■■■■■ 5.58
HMG20B-207ENST00000461099 CCDC180Q9P1Z9 1646 aa49.67■■■■■ 5.54
HMG20B-207ENST00000461099 RB1CC1Q8TDY2 1594 aa47.41■■■■■ 5.18
HMG20B-207ENST00000461099 DNAJC5BQ9UF47 199 aa47.06■■■■■ 5.12
HMG20B-207ENST00000461099 NACADO15069 1562 aa47.04■■■■■ 5.12
HMG20B-207ENST00000461099 DCAF8L2P0C7V8 631 aa46.82■■■■■ 5.09
HMG20B-207ENST00000461099 PABPN1Q86U42 306 aaKnown RBP eCLIP46.47■■■■■ 5.033e-8■■■□□ 16.7
HMG20B-207ENST00000461099 MYO15BQ96JP2 1530 aa46.33■■■■■ 5.01
HMG20B-207ENST00000461099 UNC13AQ9UPW8 1703 aa46.3■■■■■ 5
HMG20B-207ENST00000461099 BICRAQ9NZM4 1560 aa46.04■■■■■ 4.96
HMG20B-207ENST00000461099 ZCCHC6Q5VYS8 1495 aaKnown RBP45.74■■■■■ 4.91
HMG20B-207ENST00000461099 DCAF1Q9Y4B6 1507 aa45.65■■■■■ 4.9
HMG20B-207ENST00000461099 SHROOM4Q9ULL8 1493 aa45.39■■■■■ 4.86
HMG20B-207ENST00000461099 SCRIBQ14160 1630 aa45.24■■■■■ 4.83
HMG20B-207ENST00000461099 CC2D2AQ9P2K1 1620 aa45.07■■■■■ 4.81
HMG20B-207ENST00000461099 CECR2Q9BXF3 1484 aa44.99■■■■■ 4.79
HMG20B-207ENST00000461099 EIF4G1Q04637 1599 aaKnown RBP44.92■■■■■ 4.78
HMG20B-207ENST00000461099 NCAPD3P42695 1498 aa43.45■■■■■ 4.55
HMG20B-207ENST00000461099 DNAJC5Q9H3Z4 198 aa43.4■■■■■ 4.54
HMG20B-207ENST00000461099 ATAD2BQ9ULI0 1458 aa43.28■■■■■ 4.52
HMG20B-207ENST00000461099 SMARCA4P51532 1647 aa43.15■■■■■ 4.5
HMG20B-207ENST00000461099 SMARCA2P51531 1590 aa43.14■■■■■ 4.5
HMG20B-207ENST00000461099 ERCC6Q03468 1493 aa43.12■■■■■ 4.49
HMG20B-207ENST00000461099 CUX2O14529 1486 aa43.11■■■■■ 4.49
HMG20B-207ENST00000461099 HMGXB3Q12766 1538 aa43.07■■■■■ 4.48
HMG20B-207ENST00000461099 BAZ1AQ9NRL2 1556 aaPredicted RBP42.92■■■■■ 4.46
HMG20B-207ENST00000461099 BAZ1BQ9UIG0 1483 aaKnown RBP42.83■■■■■ 4.45
HMG20B-207ENST00000461099 NESP48681 1621 aa42.82■■■■■ 4.44
HMG20B-207ENST00000461099 PEG3Q9GZU2 1588 aa42.74■■■■■ 4.43
HMG20B-207ENST00000461099 MROH2BQ7Z745 1585 aa42.59■■■■■ 4.41
HMG20B-207ENST00000461099 LAMC3Q9Y6N6 1575 aa42.48■■■■■ 4.39
HMG20B-207ENST00000461099 THOC2Q8NI27 1593 aaKnown RBP42.39■■■■■ 4.38
HMG20B-207ENST00000461099 PDS5BQ9NTI5 1447 aa42.28■■■■■ 4.36
HMG20B-207ENST00000461099 KIF21AQ7Z4S6 1674 aa42.22■■■■■ 4.35
HMG20B-207ENST00000461099 CADPSQ9ULU8 1353 aa42.13■■■■■ 4.33
HMG20B-207ENST00000461099 WIZO95785 1651 aa42.06■■■■■ 4.32
HMG20B-207ENST00000461099 MRC2Q9UBG0 1479 aa41.89■■■■■ 4.3
HMG20B-207ENST00000461099 WDR62O43379 1518 aa41.78■■■■■ 4.28
HMG20B-207ENST00000461099 CEP164Q9UPV0 1460 aa41.69■■■■■ 4.26
HMG20B-207ENST00000461099 RSF1Q96T23 1441 aaPredicted RBP41.65■■■■■ 4.26
HMG20B-207ENST00000461099 FANCD2Q9BXW9 1451 aa41.63■■■■■ 4.25
HMG20B-207ENST00000461099 CFTRP13569 1480 aa41.6■■■■■ 4.25
HMG20B-207ENST00000461099 TOP2AP11388 1531 aaKnown RBP41.51■■■■■ 4.24
HMG20B-207ENST00000461099 TRIM41Q8WV44 630 aa41.38■■■■■ 4.21
HMG20B-207ENST00000461099 URB2Q14146 1524 aaKnown RBP41.29■■■■■ 4.2
HMG20B-207ENST00000461099 OSCARQ8IYS5 282 aa41.17■■■■■ 4.18
HMG20B-207ENST00000461099 PRDM2Q13029 1718 aa41.09■■■■■ 4.17
HMG20B-207ENST00000461099 CCDC88BA6NC98 1476 aa41.08■■■■■ 4.17
HMG20B-207ENST00000461099 IFT140Q96RY7 1462 aa40.87■■■■■ 4.13
HMG20B-207ENST00000461099 ZNF608Q9ULD9 1512 aaPredicted RBP40.83■■■■■ 4.13
HMG20B-207ENST00000461099 TOPBP1Q92547 1522 aa40.81■■■■■ 4.12
HMG20B-207ENST00000461099 ABCC8Q09428 1581 aa40.74■■■■■ 4.11
HMG20B-207ENST00000461099 DNMBPQ6XZF7 1577 aa40.63■■■■■ 4.09
HMG20B-207ENST00000461099 RIMBP3CA6NJZ7 1639 aa40.58■■■■■ 4.09
HMG20B-207ENST00000461099 RIMBP3BA6NNM3 1639 aa40.58■■■■■ 4.09
HMG20B-207ENST00000461099 RIMBP3Q9UFD9 1639 aa40.58■■■■■ 4.09
HMG20B-207ENST00000461099 EIF4G3O43432 1585 aaKnown RBP40.55■■■■■ 4.08
HMG20B-207ENST00000461099 TARBP1Q13395 1621 aaKnown RBP40.46■■■■■ 4.07
HMG20B-207ENST00000461099 AQRO60306 1485 aaKnown RBP eCLIP40.45■■■■■ 4.078e-7■■□□□ 12.7
HMG20B-207ENST00000461099 ARHGEF11O15085 1522 aa40.44■■■■■ 4.06
HMG20B-207ENST00000461099 POLA1P09884 1462 aaPredicted RBP40.38■■■■■ 4.05
HMG20B-207ENST00000461099 CHD1O14646 1710 aa40.28■■■■■ 4.04
HMG20B-207ENST00000461099 FBLN2P98095 1184 aa40.25■■■■■ 4.03
HMG20B-207ENST00000461099 RAD54L2Q9Y4B4 1467 aa40.24■■■■■ 4.03
HMG20B-207ENST00000461099 SOGA1O94964 1423 aa40.23■■■■■ 4.03
HMG20B-207ENST00000461099 CYB5RLQ6IPT4 315 aa40.22■■■■■ 4.03
HMG20B-207ENST00000461099 TDRD9Q8NDG6 1382 aaKnown RBP40.17■■■■■ 4.02
HMG20B-207ENST00000461099 FGD5Q6ZNL6 1462 aa40.09■■■■■ 4.01
HMG20B-207ENST00000461099 CUX1P39880 1505 aa40.03■■■■■ 4
HMG20B-207ENST00000461099 ARAP1Q96P48 1450 aa40.03■■■■■ 4
HMG20B-207ENST00000461099 WDR97A6NE52 1622 aa40.02■■■■■ 4
HMG20B-207ENST00000461099 SNAPC4Q5SXM2 1469 aa40■■■■□ 3.99
HMG20B-207ENST00000461099 CHMP7Q8WUX9 453 aaPredicted RBP39.92■■■■□ 3.98
HMG20B-207ENST00000461099 MAGI1Q96QZ7 1491 aaPredicted RBP39.89■■■■□ 3.98
HMG20B-207ENST00000461099 GRIN2BQ13224 1484 aa39.88■■■■□ 3.98
HMG20B-207ENST00000461099 CLASP1Q7Z460 1538 aa39.84■■■■□ 3.97
HMG20B-207ENST00000461099 TRHP20396 242 aaPredicted RBP39.83■■■■□ 3.97
HMG20B-207ENST00000461099 SYNJ1O43426 1573 aa39.8■■■■□ 3.96
HMG20B-207ENST00000461099 SYNJ2O15056 1496 aa39.77■■■■□ 3.96
HMG20B-207ENST00000461099 GAPVD1Q14C86 1478 aa39.72■■■■□ 3.95
HMG20B-207ENST00000461099 SUPT5HO00267 1087 aaKnown RBP39.67■■■■□ 3.94
HMG20B-207ENST00000461099 PBRM1Q86U86 1689 aa39.66■■■■□ 3.94
HMG20B-207ENST00000461099 ABCA10Q8WWZ4 1543 aa39.64■■■■□ 3.94
HMG20B-207ENST00000461099 ABCA5Q8WWZ7 1642 aa39.57■■■■□ 3.92
HMG20B-207ENST00000461099 WRNQ14191 1432 aaPredicted RBP eCLIP39.46■■■■□ 3.91
HMG20B-207ENST00000461099 GRIN2AQ12879 1464 aa39.36■■■■□ 3.89
HMG20B-207ENST00000461099 TOP2BQ02880 1626 aa39.32■■■■□ 3.88
HMG20B-207ENST00000461099 BIVM-ERCC5R4GMW8 1640 aa39.31■■■■□ 3.88
HMG20B-207ENST00000461099 ADAMTS12P58397 1594 aa39.28■■■■□ 3.88
HMG20B-207ENST00000461099 NUP160Q12769 1436 aa39.24■■■■□ 3.87
HMG20B-207ENST00000461099 FHAD1B1AJZ9 1412 aa39.21■■■■□ 3.87
HMG20B-207ENST00000461099 CEP170Q5SW79 1584 aa39.21■■■■□ 3.87
HMG20B-207ENST00000461099 ERCC6L2Q5T890 1561 aa39.21■■■■□ 3.87
HMG20B-207ENST00000461099 ERICH3Q5RHP9 1530 aa39.14■■■■□ 3.86
HMG20B-207ENST00000461099 SHROOM2Q13796 1616 aa39.07■■■■□ 3.84
HMG20B-207ENST00000461099 PRG4Q92954 1404 aaPredicted RBP38.89■■■■□ 3.82
HMG20B-207ENST00000461099 JPH4Q96JJ6 628 aa38.89■■■■□ 3.82
HMG20B-207ENST00000461099 AEBP2Q6ZN18 517 aaPredicted RBP38.84■■■■□ 3.81
HMG20B-207ENST00000461099 RUSC2Q8N2Y8 1516 aa38.73■■■■□ 3.79
Retrieved 100 of 20,778 RNA–protein pairs in 2267.3 ms