RNA–Protein interactions for RNA: ENST00000460827.1

PCYT1A-213, Transcript of phosphate cytidylyltransferase 1, choline, alpha, humanhuman

TSL 2

Gene PCYT1A, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCYT1A-213ENST00000460827 ERICH3Q5RHP9 1530 aa21.2■□□□□ 0.98
PCYT1A-213ENST00000460827 PRG4Q92954 1404 aaPredicted RBP21.19■□□□□ 0.98
PCYT1A-213ENST00000460827 JPH4Q96JJ6 628 aa21.14■□□□□ 0.97
PCYT1A-213ENST00000460827 ABCC10Q5T3U5 1492 aa21.12■□□□□ 0.97
PCYT1A-213ENST00000460827 FAM69CQ0P6D2 419 aa21.09■□□□□ 0.97
PCYT1A-213ENST00000460827 MAPKBP1O60336 1514 aa21.08■□□□□ 0.96
PCYT1A-213ENST00000460827 RUSC2Q8N2Y8 1516 aa21.08■□□□□ 0.96
PCYT1A-213ENST00000460827 DIP2BQ9P265 1576 aa21.06■□□□□ 0.96
PCYT1A-213ENST00000460827 ADCY10Q96PN6 1610 aa21.04■□□□□ 0.96
PCYT1A-213ENST00000460827 SUPT5HO00267 1087 aaKnown RBP21.04■□□□□ 0.96
PCYT1A-213ENST00000460827 KDM4FA0A1W2PPD8 638 aa21■□□□□ 0.95
PCYT1A-213ENST00000460827 NPM1P06748 294 aaKnown RBP eCLIP21■□□□□ 0.95
PCYT1A-213ENST00000460827 KDM6BO15054 1643 aa20.97■□□□□ 0.95
PCYT1A-213ENST00000460827 TSPOAP1O95153 1857 aa20.95■□□□□ 0.94
PCYT1A-213ENST00000460827 KIAA0586Q9BVV6 1533 aa20.91■□□□□ 0.94
PCYT1A-213ENST00000460827 IGF1RP08069 1367 aa20.84■□□□□ 0.93
PCYT1A-213ENST00000460827 CUL7Q14999 1698 aa20.8■□□□□ 0.92
PCYT1A-213ENST00000460827 ILDR1Q86SU0 546 aaPredicted RBP20.8■□□□□ 0.92
PCYT1A-213ENST00000460827 PTPRGP23470 1445 aa20.78■□□□□ 0.92
PCYT1A-213ENST00000460827 PPRC1Q5VV67 1664 aaKnown RBP20.78■□□□□ 0.92
PCYT1A-213ENST00000460827 ABCC2Q92887 1545 aa20.76■□□□□ 0.91
PCYT1A-213ENST00000460827 KIF27Q86VH2 1401 aa20.75■□□□□ 0.91
PCYT1A-213ENST00000460827 GLI2P10070 1586 aa20.73■□□□□ 0.91
PCYT1A-213ENST00000460827 ASXL2Q76L83 1435 aa20.73■□□□□ 0.91
PCYT1A-213ENST00000460827 TNIKQ9UKE5 1360 aa20.72■□□□□ 0.91
PCYT1A-213ENST00000460827 PLB1Q6P1J6 1458 aa20.71■□□□□ 0.91
PCYT1A-213ENST00000460827 ADGRL1O94910 1474 aa20.7■□□□□ 0.9
PCYT1A-213ENST00000460827 TTBK1Q5TCY1 1321 aaPredicted RBP20.7■□□□□ 0.9
PCYT1A-213ENST00000460827 CARMIL2Q6F5E8 1435 aa20.68■□□□□ 0.9
PCYT1A-213ENST00000460827 CARMIL1Q5VZK9 1371 aa20.67■□□□□ 0.9
PCYT1A-213ENST00000460827 UHRF1BP1LA0JNW5 1464 aa20.67■□□□□ 0.9
PCYT1A-213ENST00000460827 COL17A1Q9UMD9 1497 aaPredicted RBP20.67■□□□□ 0.9
PCYT1A-213ENST00000460827 IQGAP2Q13576 1575 aa20.63■□□□□ 0.89
PCYT1A-213ENST00000460827 MAP3K4Q9Y6R4 1608 aa20.62■□□□□ 0.89
PCYT1A-213ENST00000460827 UACAQ9BZF9 1416 aa20.61■□□□□ 0.89
PCYT1A-213ENST00000460827 EPRSP07814 1512 aaKnown RBP20.61■□□□□ 0.89
PCYT1A-213ENST00000460827 DISP1Q96F81 1524 aa20.6■□□□□ 0.89
PCYT1A-213ENST00000460827 KDM5BQ9UGL1 1544 aa20.58■□□□□ 0.89
PCYT1A-213ENST00000460827 HECW2Q9P2P5 1572 aa20.57■□□□□ 0.88
PCYT1A-213ENST00000460827 ZCCHC11Q5TAX3 1644 aaKnown RBP20.54■□□□□ 0.88
PCYT1A-213ENST00000460827 TEX14Q8IWB6 1497 aa20.54■□□□□ 0.88
PCYT1A-213ENST00000460827 UGGT2Q9NYU1 1516 aa20.5■□□□□ 0.87
PCYT1A-213ENST00000460827 MSH5O43196 834 aa20.47■□□□□ 0.87
PCYT1A-213ENST00000460827 KIAA0556O60303 1618 aa20.46■□□□□ 0.87
PCYT1A-213ENST00000460827 POTEDQ86YR6 584 aa20.46■□□□□ 0.87
PCYT1A-213ENST00000460827 WDR7Q9Y4E6 1490 aa20.44■□□□□ 0.86
PCYT1A-213ENST00000460827 RAPGEF2Q9Y4G8 1499 aa20.42■□□□□ 0.86
PCYT1A-213ENST00000460827 MAGI3Q5TCQ9 1506 aa20.38■□□□□ 0.85
PCYT1A-213ENST00000460827 CFAP43Q8NDM7 1665 aa20.37■□□□□ 0.85
PCYT1A-213ENST00000460827 CD109Q6YHK3 1445 aa20.36■□□□□ 0.85
PCYT1A-213ENST00000460827 PLPPR3Q6T4P5 718 aa20.35■□□□□ 0.85
PCYT1A-213ENST00000460827 ABCA8O94911 1581 aa20.32■□□□□ 0.84
PCYT1A-213ENST00000460827 KIF21BO75037 1637 aa20.31■□□□□ 0.84
PCYT1A-213ENST00000460827 KCNH8Q96L42 1107 aa20.3■□□□□ 0.84
PCYT1A-213ENST00000460827 CTTNBP2Q8WZ74 1663 aa20.29■□□□□ 0.84
PCYT1A-213ENST00000460827 PIAS4Q8N2W9 510 aaPredicted RBP20.28■□□□□ 0.84
PCYT1A-213ENST00000460827 GOLGA3Q08378 1498 aa20.25■□□□□ 0.83
PCYT1A-213ENST00000460827 ARAP3Q8WWN8 1544 aa20.25■□□□□ 0.83
PCYT1A-213ENST00000460827 FBXO41Q8TF61 875 aa20.24■□□□□ 0.83
PCYT1A-213ENST00000460827 ADAMTSL3P82987 1691 aa20.19■□□□□ 0.82
PCYT1A-213ENST00000460827 PTPRMP28827 1452 aa20.18■□□□□ 0.82
PCYT1A-213ENST00000460827 ATP10BO94823 1461 aa20.15■□□□□ 0.82
PCYT1A-213ENST00000460827 ABCA9Q8IUA7 1624 aa20.14■□□□□ 0.81
PCYT1A-213ENST00000460827 PPP6R1Q9UPN7 881 aa20.13■□□□□ 0.81
PCYT1A-213ENST00000460827 PRXQ9BXM0 1461 aa20.12■□□□□ 0.81
PCYT1A-213ENST00000460827 PHLDB1Q86UU1 1377 aa20.12■□□□□ 0.81
PCYT1A-213ENST00000460827 ARID3CA6NKF2 412 aa20.12■□□□□ 0.81
PCYT1A-213ENST00000460827 RAPGEF3O95398 923 aa20.1■□□□□ 0.81
PCYT1A-213ENST00000460827 BCORL1Q5H9F3 1711 aa20.09■□□□□ 0.81
PCYT1A-213ENST00000460827 FRMPD1Q5SYB0 1578 aa20.08■□□□□ 0.8
PCYT1A-213ENST00000460827 ADRA2BP18089 450 aa20.07■□□□□ 0.8
PCYT1A-213ENST00000460827 NEO1Q92859 1461 aa20.06■□□□□ 0.8
PCYT1A-213ENST00000460827 MADDQ8WXG6 1647 aa20.06■□□□□ 0.8
PCYT1A-213ENST00000460827 PCF11O94913 1555 aaKnown RBP20.06■□□□□ 0.8
PCYT1A-213ENST00000460827 P3H3Q8IVL6 736 aa20.05■□□□□ 0.8
PCYT1A-213ENST00000460827 LMTK3Q96Q04 1460 aa20.05■□□□□ 0.8
PCYT1A-213ENST00000460827 SAMD9Q5K651 1589 aa20■□□□□ 0.79
PCYT1A-213ENST00000460827 RAPGEF6Q8TEU7 1601 aa19.99■□□□□ 0.79
PCYT1A-213ENST00000460827 FAM9AQ8IZU1 332 aaPredicted RBP19.99■□□□□ 0.79
PCYT1A-213ENST00000460827 ARID4BQ4LE39 1312 aaPredicted RBP19.99■□□□□ 0.79
PCYT1A-213ENST00000460827 RIMS1Q86UR5 1692 aaKnown RBP19.97■□□□□ 0.79
PCYT1A-213ENST00000460827 ARHGEF40Q8TER5 1519 aa19.97■□□□□ 0.79
PCYT1A-213ENST00000460827 RICTORQ6R327 1708 aa19.96■□□□□ 0.79
PCYT1A-213ENST00000460827 NUP153P49790 1475 aaKnown RBP19.94■□□□□ 0.78
PCYT1A-213ENST00000460827 DENND4BO75064 1496 aaPredicted RBP19.92■□□□□ 0.78
PCYT1A-213ENST00000460827 HSPA2P54652 639 aa19.91■□□□□ 0.78
PCYT1A-213ENST00000460827 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.9■□□□□ 0.78
PCYT1A-213ENST00000460827 HNRNPUL2Q1KMD3 747 aaKnown RBP19.9■□□□□ 0.78
PCYT1A-213ENST00000460827 FHOD3Q2V2M9 1422 aa19.9■□□□□ 0.78
PCYT1A-213ENST00000460827 SIGLEC1Q9BZZ2 1709 aa19.9■□□□□ 0.78
PCYT1A-213ENST00000460827 AKNAQ7Z591 1439 aa19.88■□□□□ 0.77
PCYT1A-213ENST00000460827 ZMYM4Q5VZL5 1548 aa19.86■□□□□ 0.77
PCYT1A-213ENST00000460827 FANCAO15360 1455 aa19.86■□□□□ 0.77
PCYT1A-213ENST00000460827 CFAP74Q9C0B2 1584 aa19.84■□□□□ 0.77
PCYT1A-213ENST00000460827 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.84■□□□□ 0.77
PCYT1A-213ENST00000460827 YEATS2Q9ULM3 1422 aa19.84■□□□□ 0.77
PCYT1A-213ENST00000460827 POGZQ7Z3K3 1410 aa19.83■□□□□ 0.76
PCYT1A-213ENST00000460827 ZFYVE16Q7Z3T8 1539 aa19.82■□□□□ 0.76
PCYT1A-213ENST00000460827 PLEKHD1A6NEE1 506 aa19.82■□□□□ 0.76
PCYT1A-213ENST00000460827 CERKQ8TCT0 537 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms