RNA–Protein interactions for RNA: ENST00000460215.5

SCMH1-212, Transcript of Scm polycomb group protein homolog 1, humanhuman

TSL 3

Gene SCMH1, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCMH1-212ENST00000460215 NPM1P06748 294 aaKnown RBP eCLIP15.94■□□□□ 0.14
SCMH1-212ENST00000460215 ADGRL1O94910 1474 aa15.91■□□□□ 0.14
SCMH1-212ENST00000460215 HECW2Q9P2P5 1572 aa15.9■□□□□ 0.14
SCMH1-212ENST00000460215 FHAD1B1AJZ9 1412 aa15.89■□□□□ 0.13
SCMH1-212ENST00000460215 TSPOAP1O95153 1857 aa15.86■□□□□ 0.13
SCMH1-212ENST00000460215 ADCY10Q96PN6 1610 aa15.84■□□□□ 0.13
SCMH1-212ENST00000460215 JPH4Q96JJ6 628 aa15.84■□□□□ 0.13
SCMH1-212ENST00000460215 WRNQ14191 1432 aaPredicted RBP eCLIP15.8■□□□□ 0.12
SCMH1-212ENST00000460215 FBXO41Q8TF61 875 aa15.8■□□□□ 0.12
SCMH1-212ENST00000460215 ERICH3Q5RHP9 1530 aa15.77■□□□□ 0.11
SCMH1-212ENST00000460215 RUSC2Q8N2Y8 1516 aa15.76■□□□□ 0.11
SCMH1-212ENST00000460215 PPRC1Q5VV67 1664 aaKnown RBP15.68■□□□□ 0.1
SCMH1-212ENST00000460215 COL17A1Q9UMD9 1497 aaPredicted RBP15.65■□□□□ 0.1
SCMH1-212ENST00000460215 GLI2P10070 1586 aa15.64■□□□□ 0.09
SCMH1-212ENST00000460215 ASXL2Q76L83 1435 aa15.63■□□□□ 0.09
SCMH1-212ENST00000460215 TOP2BQ02880 1626 aa15.63■□□□□ 0.09
SCMH1-212ENST00000460215 BIVM-ERCC5R4GMW8 1640 aa15.62■□□□□ 0.09
SCMH1-212ENST00000460215 PLB1Q6P1J6 1458 aa15.62■□□□□ 0.09
SCMH1-212ENST00000460215 LMTK3Q96Q04 1460 aa15.62■□□□□ 0.09
SCMH1-212ENST00000460215 ABCC2Q92887 1545 aa15.61■□□□□ 0.09
SCMH1-212ENST00000460215 PTPRGP23470 1445 aa15.6■□□□□ 0.09
SCMH1-212ENST00000460215 KIAA0586Q9BVV6 1533 aa15.59■□□□□ 0.09
SCMH1-212ENST00000460215 TTBK1Q5TCY1 1321 aaPredicted RBP15.59■□□□□ 0.09
SCMH1-212ENST00000460215 TEX14Q8IWB6 1497 aa15.57■□□□□ 0.08
SCMH1-212ENST00000460215 MAP3K4Q9Y6R4 1608 aa15.53■□□□□ 0.08
SCMH1-212ENST00000460215 EPRSP07814 1512 aaKnown RBP15.52■□□□□ 0.07
SCMH1-212ENST00000460215 CUL7Q14999 1698 aa15.51■□□□□ 0.07
SCMH1-212ENST00000460215 TNIKQ9UKE5 1360 aa15.5■□□□□ 0.07
SCMH1-212ENST00000460215 UHRF1BP1LA0JNW5 1464 aa15.48■□□□□ 0.07
SCMH1-212ENST00000460215 CARMIL2Q6F5E8 1435 aa15.47■□□□□ 0.07
SCMH1-212ENST00000460215 UACAQ9BZF9 1416 aa15.45■□□□□ 0.06
SCMH1-212ENST00000460215 SOCS7O14512 581 aa15.45■□□□□ 0.06
SCMH1-212ENST00000460215 KIF21BO75037 1637 aa15.43■□□□□ 0.06
SCMH1-212ENST00000460215 ILDR2Q71H61 639 aa15.42■□□□□ 0.06
SCMH1-212ENST00000460215 KDM5BQ9UGL1 1544 aa15.42■□□□□ 0.06
SCMH1-212ENST00000460215 DISP3Q9P2K9 1392 aa15.4■□□□□ 0.06
SCMH1-212ENST00000460215 IGF1RP08069 1367 aa15.39■□□□□ 0.05
SCMH1-212ENST00000460215 PTPRMP28827 1452 aa15.39■□□□□ 0.05
SCMH1-212ENST00000460215 ZCCHC11Q5TAX3 1644 aaKnown RBP15.38■□□□□ 0.05
SCMH1-212ENST00000460215 WDR7Q9Y4E6 1490 aa15.37■□□□□ 0.05
SCMH1-212ENST00000460215 PCF11O94913 1555 aaKnown RBP15.36■□□□□ 0.05
SCMH1-212ENST00000460215 IQGAP2Q13576 1575 aa15.35■□□□□ 0.05
SCMH1-212ENST00000460215 MAGI3Q5TCQ9 1506 aa15.34■□□□□ 0.05
SCMH1-212ENST00000460215 CD109Q6YHK3 1445 aa15.34■□□□□ 0.05
SCMH1-212ENST00000460215 KIF27Q86VH2 1401 aa15.33■□□□□ 0.04
SCMH1-212ENST00000460215 DISP1Q96F81 1524 aa15.33■□□□□ 0.04
SCMH1-212ENST00000460215 ADAMTSL3P82987 1691 aa15.32■□□□□ 0.04
SCMH1-212ENST00000460215 CERKQ8TCT0 537 aa15.3■□□□□ 0.04
SCMH1-212ENST00000460215 CFAP43Q8NDM7 1665 aa15.29■□□□□ 0.04
SCMH1-212ENST00000460215 CARMIL1Q5VZK9 1371 aa15.28■□□□□ 0.04
SCMH1-212ENST00000460215 KCNH8Q96L42 1107 aa15.26■□□□□ 0.03
SCMH1-212ENST00000460215 ARAP3Q8WWN8 1544 aa15.24■□□□□ 0.03
SCMH1-212ENST00000460215 SUPT5HO00267 1087 aaKnown RBP15.24■□□□□ 0.03
SCMH1-212ENST00000460215 HSPA2P54652 639 aa15.24■□□□□ 0.03
SCMH1-212ENST00000460215 MADDQ8WXG6 1647 aa15.24■□□□□ 0.03
SCMH1-212ENST00000460215 SPATA31D1Q6ZQQ2 1576 aa15.23■□□□□ 0.03
SCMH1-212ENST00000460215 KIAA0556O60303 1618 aa15.22■□□□□ 0.03
SCMH1-212ENST00000460215 UGGT2Q9NYU1 1516 aa15.22■□□□□ 0.03
SCMH1-212ENST00000460215 ARID4BQ4LE39 1312 aaPredicted RBP15.21■□□□□ 0.03
SCMH1-212ENST00000460215 BCORL1Q5H9F3 1711 aa15.21■□□□□ 0.03
SCMH1-212ENST00000460215 RIMS1Q86UR5 1692 aaKnown RBP15.16■□□□□ 0.02
SCMH1-212ENST00000460215 RAPGEF3O95398 923 aa15.15■□□□□ 0.02
SCMH1-212ENST00000460215 PLPPR3Q6T4P5 718 aa15.14■□□□□ 0.01
SCMH1-212ENST00000460215 PHLDB1Q86UU1 1377 aa15.13■□□□□ 0.01
SCMH1-212ENST00000460215 ABCA8O94911 1581 aa15.11■□□□□ 0.01
SCMH1-212ENST00000460215 FRMPD1Q5SYB0 1578 aa15.09■□□□□ 0.01
SCMH1-212ENST00000460215 ARHGEF40Q8TER5 1519 aa15.07■□□□□ 0
SCMH1-212ENST00000460215 NEO1Q92859 1461 aa15.07■□□□□ 0
SCMH1-212ENST00000460215 RAPGEF2Q9Y4G8 1499 aa15.07■□□□□ 0
SCMH1-212ENST00000460215 ARID3CA6NKF2 412 aa15.05■□□□□ -0
SCMH1-212ENST00000460215 ABCA9Q8IUA7 1624 aa15.05■□□□□ -0
SCMH1-212ENST00000460215 GOLGA3Q08378 1498 aa15.04■□□□□ -0
SCMH1-212ENST00000460215 POGZQ7Z3K3 1410 aa15.03■□□□□ -0
SCMH1-212ENST00000460215 FANCAO15360 1455 aa15.01□□□□□ -0.01
SCMH1-212ENST00000460215 YEATS2Q9ULM3 1422 aa15□□□□□ -0.01
SCMH1-212ENST00000460215 DMRT2Q9Y5R5 561 aa14.99□□□□□ -0.01
SCMH1-212ENST00000460215 ATP10BO94823 1461 aa14.98□□□□□ -0.01
SCMH1-212ENST00000460215 AKNAQ7Z591 1439 aa14.98□□□□□ -0.01
SCMH1-212ENST00000460215 DENND4BO75064 1496 aaPredicted RBP14.97□□□□□ -0.01
SCMH1-212ENST00000460215 TTC37Q6PGP7 1564 aa14.97□□□□□ -0.01
SCMH1-212ENST00000460215 MLECQ14165 292 aa14.96□□□□□ -0.01
SCMH1-212ENST00000460215 CTTNBP2Q8WZ74 1663 aa14.95□□□□□ -0.02
SCMH1-212ENST00000460215 FER1L4A9Z1Z3 1794 aa14.95□□□□□ -0.02
SCMH1-212ENST00000460215 PREX1Q8TCU6 1659 aa14.94□□□□□ -0.02
SCMH1-212ENST00000460215 FHOD3Q2V2M9 1422 aa14.93□□□□□ -0.02
SCMH1-212ENST00000460215 ZFYVE16Q7Z3T8 1539 aa14.93□□□□□ -0.02
SCMH1-212ENST00000460215 RICTORQ6R327 1708 aa14.93□□□□□ -0.02
SCMH1-212ENST00000460215 SIGLEC1Q9BZZ2 1709 aa14.93□□□□□ -0.02
SCMH1-212ENST00000460215 STRCQ7RTU9 1775 aa14.93□□□□□ -0.02
SCMH1-212ENST00000460215 FAM9AQ8IZU1 332 aaPredicted RBP14.91□□□□□ -0.02
SCMH1-212ENST00000460215 EFCAB5A4FU69 1503 aa14.91□□□□□ -0.02
SCMH1-212ENST00000460215 ZMYM4Q5VZL5 1548 aa14.91□□□□□ -0.02
SCMH1-212ENST00000460215 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.88□□□□□ -0.03
SCMH1-212ENST00000460215 HNRNPUL2Q1KMD3 747 aaKnown RBP14.88□□□□□ -0.03
SCMH1-212ENST00000460215 PTPRTO14522 1441 aa14.88□□□□□ -0.03
SCMH1-212ENST00000460215 UHRF1BP1Q6BDS2 1440 aa14.88□□□□□ -0.03
SCMH1-212ENST00000460215 IQSEC2Q5JU85 1478 aa14.88□□□□□ -0.03
SCMH1-212ENST00000460215 CEBPAP49715 358 aaPredicted RBP14.87□□□□□ -0.03
SCMH1-212ENST00000460215 LTBP4Q8N2S1 1624 aa14.87□□□□□ -0.03
SCMH1-212ENST00000460215 ARHGEF12Q9NZN5 1544 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms