RNA–Protein interactions for RNA: ENST00000460215.5

SCMH1-212, Transcript of Scm polycomb group protein homolog 1, humanhuman

TSL 3

Gene SCMH1, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCMH1-212ENST00000460215 NISCHQ9Y2I1 1504 aa22.16■■□□□ 1.14
SCMH1-212ENST00000460215 ABCC9O60706 1549 aa20.89■□□□□ 0.94
SCMH1-212ENST00000460215 DNAJC5BQ9UF47 199 aa20.18■□□□□ 0.82
SCMH1-212ENST00000460215 CCDC180Q9P1Z9 1646 aa20.17■□□□□ 0.82
SCMH1-212ENST00000460215 RB1CC1Q8TDY2 1594 aa19.56■□□□□ 0.72
SCMH1-212ENST00000460215 PABPN1Q86U42 306 aaKnown RBP eCLIP19.34■□□□□ 0.69
SCMH1-212ENST00000460215 NACADO15069 1562 aa19.24■□□□□ 0.67
SCMH1-212ENST00000460215 UNC13AQ9UPW8 1703 aa19.05■□□□□ 0.64
SCMH1-212ENST00000460215 DNAJC5Q9H3Z4 198 aa19.04■□□□□ 0.64
SCMH1-212ENST00000460215 DCAF8L2P0C7V8 631 aa19.03■□□□□ 0.64
SCMH1-212ENST00000460215 BICRAQ9NZM4 1560 aa19■□□□□ 0.63
SCMH1-212ENST00000460215 CECR2Q9BXF3 1484 aa18.9■□□□□ 0.62
SCMH1-212ENST00000460215 CC2D2AQ9P2K1 1620 aa18.81■□□□□ 0.6
SCMH1-212ENST00000460215 MYO15BQ96JP2 1530 aa18.74■□□□□ 0.59
SCMH1-212ENST00000460215 SHROOM4Q9ULL8 1493 aa18.7■□□□□ 0.58
SCMH1-212ENST00000460215 EIF4G1Q04637 1599 aaKnown RBP18.61■□□□□ 0.57
SCMH1-212ENST00000460215 SCRIBQ14160 1630 aa18.38■□□□□ 0.53
SCMH1-212ENST00000460215 CUX2O14529 1486 aa18.28■□□□□ 0.52
SCMH1-212ENST00000460215 DCAF1Q9Y4B6 1507 aa18.24■□□□□ 0.51
SCMH1-212ENST00000460215 ZCCHC6Q5VYS8 1495 aaKnown RBP18.23■□□□□ 0.51
SCMH1-212ENST00000460215 ERCC6Q03468 1493 aa18.11■□□□□ 0.49
SCMH1-212ENST00000460215 TRIM41Q8WV44 630 aa17.97■□□□□ 0.47
SCMH1-212ENST00000460215 NCAPD3P42695 1498 aa17.77■□□□□ 0.44
SCMH1-212ENST00000460215 NESP48681 1621 aa17.74■□□□□ 0.43
SCMH1-212ENST00000460215 THOC2Q8NI27 1593 aaKnown RBP17.69■□□□□ 0.42
SCMH1-212ENST00000460215 ATAD2BQ9ULI0 1458 aa17.63■□□□□ 0.41
SCMH1-212ENST00000460215 HMGXB3Q12766 1538 aa17.59■□□□□ 0.41
SCMH1-212ENST00000460215 SMARCA2P51531 1590 aa17.58■□□□□ 0.41
SCMH1-212ENST00000460215 LAMC3Q9Y6N6 1575 aa17.49■□□□□ 0.39
SCMH1-212ENST00000460215 KIF21AQ7Z4S6 1674 aa17.46■□□□□ 0.39
SCMH1-212ENST00000460215 BAZ1BQ9UIG0 1483 aaKnown RBP17.45■□□□□ 0.38
SCMH1-212ENST00000460215 SMARCA4P51532 1647 aa17.43■□□□□ 0.38
SCMH1-212ENST00000460215 PDS5BQ9NTI5 1447 aa17.43■□□□□ 0.38
SCMH1-212ENST00000460215 BAZ1AQ9NRL2 1556 aaPredicted RBP17.38■□□□□ 0.37
SCMH1-212ENST00000460215 MRC2Q9UBG0 1479 aa17.33■□□□□ 0.37
SCMH1-212ENST00000460215 OSCARQ8IYS5 282 aa17.32■□□□□ 0.36
SCMH1-212ENST00000460215 WDR62O43379 1518 aa17.3■□□□□ 0.36
SCMH1-212ENST00000460215 PEG3Q9GZU2 1588 aa17.25■□□□□ 0.35
SCMH1-212ENST00000460215 CADPSQ9ULU8 1353 aa17.21■□□□□ 0.35
SCMH1-212ENST00000460215 RIMBP3CA6NJZ7 1639 aa17.18■□□□□ 0.34
SCMH1-212ENST00000460215 RIMBP3BA6NNM3 1639 aa17.18■□□□□ 0.34
SCMH1-212ENST00000460215 RIMBP3Q9UFD9 1639 aa17.18■□□□□ 0.34
SCMH1-212ENST00000460215 CEP164Q9UPV0 1460 aa17.12■□□□□ 0.33
SCMH1-212ENST00000460215 MROH2BQ7Z745 1585 aa17.07■□□□□ 0.32
SCMH1-212ENST00000460215 ARHGEF11O15085 1522 aa17.06■□□□□ 0.32
SCMH1-212ENST00000460215 AEBP2Q6ZN18 517 aaPredicted RBP17.05■□□□□ 0.32
SCMH1-212ENST00000460215 FANCD2Q9BXW9 1451 aa17.04■□□□□ 0.32
SCMH1-212ENST00000460215 TRHP20396 242 aaPredicted RBP17.03■□□□□ 0.32
SCMH1-212ENST00000460215 CYB5RLQ6IPT4 315 aa16.97■□□□□ 0.31
SCMH1-212ENST00000460215 URB2Q14146 1524 aaKnown RBP16.94■□□□□ 0.3
SCMH1-212ENST00000460215 CFTRP13569 1480 aa16.87■□□□□ 0.29
SCMH1-212ENST00000460215 ARAP1Q96P48 1450 aa16.86■□□□□ 0.29
SCMH1-212ENST00000460215 ZNF608Q9ULD9 1512 aaPredicted RBP16.85■□□□□ 0.29
SCMH1-212ENST00000460215 WIZO95785 1651 aa16.81■□□□□ 0.28
SCMH1-212ENST00000460215 IFT140Q96RY7 1462 aa16.8■□□□□ 0.28
SCMH1-212ENST00000460215 RSF1Q96T23 1441 aaPredicted RBP16.73■□□□□ 0.27
SCMH1-212ENST00000460215 EIF4G3O43432 1585 aaKnown RBP16.72■□□□□ 0.27
SCMH1-212ENST00000460215 CHD1O14646 1710 aa16.69■□□□□ 0.26
SCMH1-212ENST00000460215 FBLN2P98095 1184 aa16.65■□□□□ 0.26
SCMH1-212ENST00000460215 TOPBP1Q92547 1522 aa16.63■□□□□ 0.25
SCMH1-212ENST00000460215 AQRO60306 1485 aaKnown RBP eCLIP16.6■□□□□ 0.25
SCMH1-212ENST00000460215 PRDM2Q13029 1718 aa16.59■□□□□ 0.25
SCMH1-212ENST00000460215 TOP2AP11388 1531 aaKnown RBP16.58■□□□□ 0.24
SCMH1-212ENST00000460215 ABCC8Q09428 1581 aa16.52■□□□□ 0.24
SCMH1-212ENST00000460215 TARBP1Q13395 1621 aaKnown RBP16.52■□□□□ 0.23
SCMH1-212ENST00000460215 DNMBPQ6XZF7 1577 aa16.51■□□□□ 0.23
SCMH1-212ENST00000460215 CLASP1Q7Z460 1538 aa16.5■□□□□ 0.23
SCMH1-212ENST00000460215 SYNJ1O43426 1573 aa16.44■□□□□ 0.22
SCMH1-212ENST00000460215 SNAPC4Q5SXM2 1469 aa16.43■□□□□ 0.22
SCMH1-212ENST00000460215 POLA1P09884 1462 aaPredicted RBP16.42■□□□□ 0.22
SCMH1-212ENST00000460215 ILDR1Q86SU0 546 aaPredicted RBP16.4■□□□□ 0.22
SCMH1-212ENST00000460215 CHMP7Q8WUX9 453 aaPredicted RBP16.4■□□□□ 0.22
SCMH1-212ENST00000460215 GAPVD1Q14C86 1478 aa16.4■□□□□ 0.22
SCMH1-212ENST00000460215 TDRD9Q8NDG6 1382 aaKnown RBP16.39■□□□□ 0.21
SCMH1-212ENST00000460215 CCDC88BA6NC98 1476 aa16.39■□□□□ 0.21
SCMH1-212ENST00000460215 RAD54L2Q9Y4B4 1467 aa16.37■□□□□ 0.21
SCMH1-212ENST00000460215 MAGI1Q96QZ7 1491 aaPredicted RBP16.35■□□□□ 0.21
SCMH1-212ENST00000460215 SOGA1O94964 1423 aa16.32■□□□□ 0.2
SCMH1-212ENST00000460215 SYNJ2O15056 1496 aa16.3■□□□□ 0.2
SCMH1-212ENST00000460215 WDR97A6NE52 1622 aa16.3■□□□□ 0.2
SCMH1-212ENST00000460215 GRIN2BQ13224 1484 aa16.28■□□□□ 0.2
SCMH1-212ENST00000460215 FGD5Q6ZNL6 1462 aa16.22■□□□□ 0.19
SCMH1-212ENST00000460215 ERCC6L2Q5T890 1561 aa16.2■□□□□ 0.18
SCMH1-212ENST00000460215 KIF13AQ9H1H9 1805 aa16.17■□□□□ 0.18
SCMH1-212ENST00000460215 KDM4FA0A1W2PPD8 638 aa16.16■□□□□ 0.18
SCMH1-212ENST00000460215 PBRM1Q86U86 1689 aa16.12■□□□□ 0.17
SCMH1-212ENST00000460215 CEP170Q5SW79 1584 aa16.11■□□□□ 0.17
SCMH1-212ENST00000460215 CUX1P39880 1505 aa16.09■□□□□ 0.17
SCMH1-212ENST00000460215 GRIN2AQ12879 1464 aa16.06■□□□□ 0.16
SCMH1-212ENST00000460215 FAM69CQ0P6D2 419 aa16.06■□□□□ 0.16
SCMH1-212ENST00000460215 ABCC10Q5T3U5 1492 aa16.03■□□□□ 0.16
SCMH1-212ENST00000460215 NUP160Q12769 1436 aa16.03■□□□□ 0.16
SCMH1-212ENST00000460215 KDM6BO15054 1643 aa16.03■□□□□ 0.16
SCMH1-212ENST00000460215 ABCA5Q8WWZ7 1642 aa16.02■□□□□ 0.16
SCMH1-212ENST00000460215 SHROOM2Q13796 1616 aa16.01■□□□□ 0.15
SCMH1-212ENST00000460215 ABCA10Q8WWZ4 1543 aa15.99■□□□□ 0.15
SCMH1-212ENST00000460215 ADAMTS12P58397 1594 aa15.97■□□□□ 0.15
SCMH1-212ENST00000460215 DIP2BQ9P265 1576 aa15.97■□□□□ 0.15
SCMH1-212ENST00000460215 MAPKBP1O60336 1514 aa15.95■□□□□ 0.14
SCMH1-212ENST00000460215 PRG4Q92954 1404 aaPredicted RBP15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms