RNA–Protein interactions for RNA: ENST00000460048.1

SHANK2-213, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 736 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-213ENST00000460048 JPH4Q96JJ6 628 aa28.27■■■□□ 2.12
SHANK2-213ENST00000460048 PRG4Q92954 1404 aaPredicted RBP28.26■■■□□ 2.11
SHANK2-213ENST00000460048 KIAA0586Q9BVV6 1533 aa28.24■■■□□ 2.11
SHANK2-213ENST00000460048 RAPGEF2Q9Y4G8 1499 aa28.1■■■□□ 2.09
SHANK2-213ENST00000460048 TRHP20396 242 aaPredicted RBP28.09■■■□□ 2.09
SHANK2-213ENST00000460048 IQGAP2Q13576 1575 aa28.06■■■□□ 2.08
SHANK2-213ENST00000460048 CTTNBP2Q8WZ74 1663 aa27.95■■■□□ 2.07
SHANK2-213ENST00000460048 PRXQ9BXM0 1461 aa27.95■■■□□ 2.06
SHANK2-213ENST00000460048 ADCY10Q96PN6 1610 aa27.93■■■□□ 2.06
SHANK2-213ENST00000460048 CARMIL2Q6F5E8 1435 aa27.92■■■□□ 2.06
SHANK2-213ENST00000460048 UGGT2Q9NYU1 1516 aa27.91■■■□□ 2.06
SHANK2-213ENST00000460048 DISP1Q96F81 1524 aa27.89■■■□□ 2.06
SHANK2-213ENST00000460048 TNIKQ9UKE5 1360 aa27.86■■■□□ 2.05
SHANK2-213ENST00000460048 PTPRGP23470 1445 aa27.86■■■□□ 2.05
SHANK2-213ENST00000460048 KIF13AQ9H1H9 1805 aa27.83■■■□□ 2.05
SHANK2-213ENST00000460048 KIAA0556O60303 1618 aa27.81■■■□□ 2.04
SHANK2-213ENST00000460048 MAPKBP1O60336 1514 aa27.8■■■□□ 2.04
SHANK2-213ENST00000460048 EEA1Q15075 1411 aa27.79■■■□□ 2.04
SHANK2-213ENST00000460048 CSRNP3Q8WYN3 585 aa27.79■■■□□ 2.04
SHANK2-213ENST00000460048 NPM1P06748 294 aaKnown RBP eCLIP27.77■■■□□ 2.04
SHANK2-213ENST00000460048 TTBK1Q5TCY1 1321 aaPredicted RBP27.73■■■□□ 2.03
SHANK2-213ENST00000460048 UHRF1BP1LA0JNW5 1464 aa27.71■■■□□ 2.03
SHANK2-213ENST00000460048 ABCC10Q5T3U5 1492 aa27.7■■■□□ 2.02
SHANK2-213ENST00000460048 CHIC1Q5VXU3 224 aa27.69■■■□□ 2.02
SHANK2-213ENST00000460048 UACAQ9BZF9 1416 aa27.68■■■□□ 2.02
SHANK2-213ENST00000460048 ABCC2Q92887 1545 aa27.68■■■□□ 2.02
SHANK2-213ENST00000460048 GOLGA3Q08378 1498 aa27.68■■■□□ 2.02
SHANK2-213ENST00000460048 DIP2BQ9P265 1576 aa27.67■■■□□ 2.02
SHANK2-213ENST00000460048 FAM69CQ0P6D2 419 aa27.59■■■□□ 2.01
SHANK2-213ENST00000460048 KIF21BO75037 1637 aa27.59■■■□□ 2.01
SHANK2-213ENST00000460048 KDM5BQ9UGL1 1544 aa27.58■■■□□ 2.01
SHANK2-213ENST00000460048 FAM9AQ8IZU1 332 aaPredicted RBP27.58■■■□□ 2.01
SHANK2-213ENST00000460048 ZCCHC11Q5TAX3 1644 aaKnown RBP27.56■■■□□ 2
SHANK2-213ENST00000460048 ABCA8O94911 1581 aa27.54■■■□□ 2
SHANK2-213ENST00000460048 SAMD9Q5K651 1589 aa27.54■■■□□ 2
SHANK2-213ENST00000460048 PLB1Q6P1J6 1458 aa27.53■■■□□ 2
SHANK2-213ENST00000460048 ASXL2Q76L83 1435 aa27.53■■■□□ 2
SHANK2-213ENST00000460048 TSPOAP1O95153 1857 aa27.48■■□□□ 1.99
SHANK2-213ENST00000460048 GLI2P10070 1586 aa27.46■■□□□ 1.99
SHANK2-213ENST00000460048 P3H3Q8IVL6 736 aa27.42■■□□□ 1.98
SHANK2-213ENST00000460048 EPRSP07814 1512 aaKnown RBP27.39■■□□□ 1.98
SHANK2-213ENST00000460048 PPRC1Q5VV67 1664 aaKnown RBP27.38■■□□□ 1.97
SHANK2-213ENST00000460048 MAP3K4Q9Y6R4 1608 aa27.34■■□□□ 1.97
SHANK2-213ENST00000460048 WDR7Q9Y4E6 1490 aa27.34■■□□□ 1.97
SHANK2-213ENST00000460048 RAPGEF6Q8TEU7 1601 aa27.33■■□□□ 1.97
SHANK2-213ENST00000460048 EFCAB5A4FU69 1503 aa27.31■■□□□ 1.96
SHANK2-213ENST00000460048 KDM6BO15054 1643 aa27.3■■□□□ 1.96
SHANK2-213ENST00000460048 RANGAP1P46060 587 aaPredicted RBP27.29■■□□□ 1.96
SHANK2-213ENST00000460048 FHOD3Q2V2M9 1422 aa27.29■■□□□ 1.96
SHANK2-213ENST00000460048 ATP10BO94823 1461 aa27.27■■□□□ 1.96
SHANK2-213ENST00000460048 UBTFP17480 764 aaKnown RBP27.24■■□□□ 1.95
SHANK2-213ENST00000460048 EHMT2Q96KQ7 1210 aa27.23■■□□□ 1.95
SHANK2-213ENST00000460048 CFAP43Q8NDM7 1665 aa27.22■■□□□ 1.95
SHANK2-213ENST00000460048 NUP153P49790 1475 aaKnown RBP27.19■■□□□ 1.94
SHANK2-213ENST00000460048 ARID3CA6NKF2 412 aa27.18■■□□□ 1.94
SHANK2-213ENST00000460048 TEX14Q8IWB6 1497 aa27.16■■□□□ 1.94
SHANK2-213ENST00000460048 KCNH8Q96L42 1107 aa27.15■■□□□ 1.94
SHANK2-213ENST00000460048 ARHGAP35Q9NRY4 1499 aa27.13■■□□□ 1.93
SHANK2-213ENST00000460048 MAGI3Q5TCQ9 1506 aa27.11■■□□□ 1.93
SHANK2-213ENST00000460048 CD109Q6YHK3 1445 aa27.11■■□□□ 1.93
SHANK2-213ENST00000460048 ABCA9Q8IUA7 1624 aa27.08■■□□□ 1.93
SHANK2-213ENST00000460048 COL17A1Q9UMD9 1497 aaPredicted RBP27.07■■□□□ 1.92
SHANK2-213ENST00000460048 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.03■■□□□ 1.92
SHANK2-213ENST00000460048 HNRNPUL2Q1KMD3 747 aaKnown RBP27.03■■□□□ 1.92
SHANK2-213ENST00000460048 FMN1Q68DA7 1419 aa27.03■■□□□ 1.92
SHANK2-213ENST00000460048 HECW1Q76N89 1606 aa26.98■■□□□ 1.91
SHANK2-213ENST00000460048 CDK13Q14004 1512 aaKnown RBP26.97■■□□□ 1.91
SHANK2-213ENST00000460048 PLEKHD1A6NEE1 506 aa26.95■■□□□ 1.9
SHANK2-213ENST00000460048 LRRIQ1Q96JM4 1722 aa26.93■■□□□ 1.9
SHANK2-213ENST00000460048 ARAP3Q8WWN8 1544 aa26.9■■□□□ 1.9
SHANK2-213ENST00000460048 AEBP2Q6ZN18 517 aaPredicted RBP26.89■■□□□ 1.9
SHANK2-213ENST00000460048 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.88■■□□□ 1.89
SHANK2-213ENST00000460048 PHLDB1Q86UU1 1377 aa26.85■■□□□ 1.89
SHANK2-213ENST00000460048 NEO1Q92859 1461 aa26.85■■□□□ 1.89
SHANK2-213ENST00000460048 TTC37Q6PGP7 1564 aa26.84■■□□□ 1.89
SHANK2-213ENST00000460048 ATP1B4Q9UN42 357 aaPredicted RBP26.84■■□□□ 1.89
SHANK2-213ENST00000460048 PCF11O94913 1555 aaKnown RBP26.84■■□□□ 1.89
SHANK2-213ENST00000460048 CLIP1P30622 1438 aa26.82■■□□□ 1.88
SHANK2-213ENST00000460048 CASKIN1Q8WXD9 1431 aa26.81■■□□□ 1.88
SHANK2-213ENST00000460048 KDM4FA0A1W2PPD8 638 aa26.78■■□□□ 1.88
SHANK2-213ENST00000460048 CFAP74Q9C0B2 1584 aa26.77■■□□□ 1.88
SHANK2-213ENST00000460048 CDK11AQ9UQ88 783 aaPredicted RBP26.75■■□□□ 1.87
SHANK2-213ENST00000460048 KIF14Q15058 1648 aa26.74■■□□□ 1.87
SHANK2-213ENST00000460048 CCDC18Q5T9S5 1454 aa26.74■■□□□ 1.87
SHANK2-213ENST00000460048 TROQ12816 1431 aaPredicted RBP26.73■■□□□ 1.87
SHANK2-213ENST00000460048 FRMPD1Q5SYB0 1578 aa26.73■■□□□ 1.87
SHANK2-213ENST00000460048 FANCAO15360 1455 aa26.73■■□□□ 1.87
SHANK2-213ENST00000460048 FYCO1Q9BQS8 1478 aa26.73■■□□□ 1.87
SHANK2-213ENST00000460048 MYO5CQ9NQX4 1742 aa26.72■■□□□ 1.87
SHANK2-213ENST00000460048 AKNAQ7Z591 1439 aa26.7■■□□□ 1.86
SHANK2-213ENST00000460048 RICTORQ6R327 1708 aa26.7■■□□□ 1.86
SHANK2-213ENST00000460048 ADGRL1O94910 1474 aa26.69■■□□□ 1.86
SHANK2-213ENST00000460048 PLCH2O75038 1416 aa26.69■■□□□ 1.86
SHANK2-213ENST00000460048 RAPGEF3O95398 923 aa26.68■■□□□ 1.86
SHANK2-213ENST00000460048 DENND4BO75064 1496 aaPredicted RBP26.64■■□□□ 1.86
SHANK2-213ENST00000460048 CEP162Q5TB80 1403 aa26.64■■□□□ 1.85
SHANK2-213ENST00000460048 CDC42BPBQ9Y5S2 1711 aa26.59■■□□□ 1.85
SHANK2-213ENST00000460048 ZMYM4Q5VZL5 1548 aa26.56■■□□□ 1.84
SHANK2-213ENST00000460048 PREX2Q70Z35 1606 aa26.55■■□□□ 1.84
SHANK2-213ENST00000460048 EFCAB2Q5VUJ9 269 aa26.55■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms