RNA–Protein interactions for RNA: ENST00000458478.5

RPSA-204, Transcript of ribosomal protein SA, humanhuman

TSL 2

Gene RPSA, Length 874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSA-204ENST00000458478 RUSC2Q8N2Y8 1516 aa19.65■□□□□ 0.74
RPSA-204ENST00000458478 KIAA0586Q9BVV6 1533 aa19.61■□□□□ 0.73
RPSA-204ENST00000458478 CUL7Q14999 1698 aa19.59■□□□□ 0.73
RPSA-204ENST00000458478 CARMIL1Q5VZK9 1371 aa19.57■□□□□ 0.72
RPSA-204ENST00000458478 NPM1P06748 294 aaKnown RBP eCLIP19.55■□□□□ 0.72
RPSA-204ENST00000458478 KIF13AQ9H1H9 1805 aa19.51■□□□□ 0.71
RPSA-204ENST00000458478 FAM69CQ0P6D2 419 aa19.49■□□□□ 0.71
RPSA-204ENST00000458478 ADCY10Q96PN6 1610 aa19.47■□□□□ 0.71
RPSA-204ENST00000458478 AEBP2Q6ZN18 517 aaPredicted RBP19.45■□□□□ 0.7
RPSA-204ENST00000458478 ABCC10Q5T3U5 1492 aa19.45■□□□□ 0.7
RPSA-204ENST00000458478 TTBK1Q5TCY1 1321 aaPredicted RBP19.45■□□□□ 0.7
RPSA-204ENST00000458478 PTPRGP23470 1445 aa19.44■□□□□ 0.7
RPSA-204ENST00000458478 MAPKBP1O60336 1514 aa19.44■□□□□ 0.7
RPSA-204ENST00000458478 CARMIL2Q6F5E8 1435 aa19.41■□□□□ 0.7
RPSA-204ENST00000458478 TNIKQ9UKE5 1360 aa19.4■□□□□ 0.7
RPSA-204ENST00000458478 IQGAP2Q13576 1575 aa19.38■□□□□ 0.69
RPSA-204ENST00000458478 DIP2BQ9P265 1576 aa19.37■□□□□ 0.69
RPSA-204ENST00000458478 RAPGEF2Q9Y4G8 1499 aa19.37■□□□□ 0.69
RPSA-204ENST00000458478 DISP1Q96F81 1524 aa19.33■□□□□ 0.68
RPSA-204ENST00000458478 ABCC2Q92887 1545 aa19.3■□□□□ 0.68
RPSA-204ENST00000458478 UACAQ9BZF9 1416 aa19.28■□□□□ 0.68
RPSA-204ENST00000458478 UGGT2Q9NYU1 1516 aa19.28■□□□□ 0.68
RPSA-204ENST00000458478 UHRF1BP1LA0JNW5 1464 aa19.27■□□□□ 0.67
RPSA-204ENST00000458478 TSPOAP1O95153 1857 aa19.26■□□□□ 0.67
RPSA-204ENST00000458478 ASXL2Q76L83 1435 aa19.25■□□□□ 0.67
RPSA-204ENST00000458478 PLB1Q6P1J6 1458 aa19.23■□□□□ 0.67
RPSA-204ENST00000458478 KIAA0556O60303 1618 aa19.21■□□□□ 0.67
RPSA-204ENST00000458478 KDM6BO15054 1643 aa19.2■□□□□ 0.66
RPSA-204ENST00000458478 KDM5BQ9UGL1 1544 aa19.19■□□□□ 0.66
RPSA-204ENST00000458478 GLI2P10070 1586 aa19.18■□□□□ 0.66
RPSA-204ENST00000458478 PRXQ9BXM0 1461 aa19.17■□□□□ 0.66
RPSA-204ENST00000458478 CTTNBP2Q8WZ74 1663 aa19.15■□□□□ 0.66
RPSA-204ENST00000458478 EPRSP07814 1512 aaKnown RBP19.13■□□□□ 0.65
RPSA-204ENST00000458478 ZCCHC11Q5TAX3 1644 aaKnown RBP19.13■□□□□ 0.65
RPSA-204ENST00000458478 PPRC1Q5VV67 1664 aaKnown RBP19.12■□□□□ 0.65
RPSA-204ENST00000458478 GOLGA3Q08378 1498 aa19.12■□□□□ 0.65
RPSA-204ENST00000458478 KDM4FA0A1W2PPD8 638 aa19.11■□□□□ 0.65
RPSA-204ENST00000458478 CSRNP3Q8WYN3 585 aa19.09■□□□□ 0.65
RPSA-204ENST00000458478 MAP3K4Q9Y6R4 1608 aa19.06■□□□□ 0.64
RPSA-204ENST00000458478 COL17A1Q9UMD9 1497 aaPredicted RBP19.05■□□□□ 0.64
RPSA-204ENST00000458478 P3H3Q8IVL6 736 aa19.05■□□□□ 0.64
RPSA-204ENST00000458478 ABCA8O94911 1581 aa19.05■□□□□ 0.64
RPSA-204ENST00000458478 WDR7Q9Y4E6 1490 aa19.04■□□□□ 0.64
RPSA-204ENST00000458478 KCNH8Q96L42 1107 aa19.04■□□□□ 0.64
RPSA-204ENST00000458478 TEX14Q8IWB6 1497 aa19.01■□□□□ 0.63
RPSA-204ENST00000458478 FAM9AQ8IZU1 332 aaPredicted RBP18.99■□□□□ 0.63
RPSA-204ENST00000458478 ARID3CA6NKF2 412 aa18.97■□□□□ 0.63
RPSA-204ENST00000458478 CD109Q6YHK3 1445 aa18.97■□□□□ 0.63
RPSA-204ENST00000458478 ATP10BO94823 1461 aa18.93■□□□□ 0.62
RPSA-204ENST00000458478 EEA1Q15075 1411 aa18.92■□□□□ 0.62
RPSA-204ENST00000458478 MAGI3Q5TCQ9 1506 aa18.92■□□□□ 0.62
RPSA-204ENST00000458478 RANGAP1P46060 587 aaPredicted RBP18.92■□□□□ 0.62
RPSA-204ENST00000458478 CFAP43Q8NDM7 1665 aa18.91■□□□□ 0.62
RPSA-204ENST00000458478 SAMD9Q5K651 1589 aa18.9■□□□□ 0.62
RPSA-204ENST00000458478 ADGRL1O94910 1474 aa18.87■□□□□ 0.61
RPSA-204ENST00000458478 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.84■□□□□ 0.61
RPSA-204ENST00000458478 HNRNPUL2Q1KMD3 747 aaKnown RBP18.84■□□□□ 0.61
RPSA-204ENST00000458478 RAPGEF6Q8TEU7 1601 aa18.84■□□□□ 0.61
RPSA-204ENST00000458478 FHOD3Q2V2M9 1422 aa18.82■□□□□ 0.6
RPSA-204ENST00000458478 ABCA9Q8IUA7 1624 aa18.78■□□□□ 0.6
RPSA-204ENST00000458478 NUP153P49790 1475 aaKnown RBP18.78■□□□□ 0.6
RPSA-204ENST00000458478 ARAP3Q8WWN8 1544 aa18.78■□□□□ 0.6
RPSA-204ENST00000458478 KIF21BO75037 1637 aa18.76■□□□□ 0.59
RPSA-204ENST00000458478 PLEKHD1A6NEE1 506 aa18.75■□□□□ 0.59
RPSA-204ENST00000458478 CHIC1Q5VXU3 224 aa18.75■□□□□ 0.59
RPSA-204ENST00000458478 EHMT2Q96KQ7 1210 aa18.75■□□□□ 0.59
RPSA-204ENST00000458478 PHLDB1Q86UU1 1377 aa18.75■□□□□ 0.59
RPSA-204ENST00000458478 RAPGEF3O95398 923 aa18.73■□□□□ 0.59
RPSA-204ENST00000458478 UBTFP17480 764 aaKnown RBP18.72■□□□□ 0.59
RPSA-204ENST00000458478 EFCAB5A4FU69 1503 aa18.7■□□□□ 0.58
RPSA-204ENST00000458478 NEO1Q92859 1461 aa18.69■□□□□ 0.58
RPSA-204ENST00000458478 ATP1B4Q9UN42 357 aaPredicted RBP18.62■□□□□ 0.57
RPSA-204ENST00000458478 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.62■□□□□ 0.57not detected■■□□□ 12.4
RPSA-204ENST00000458478 AKNAQ7Z591 1439 aa18.61■□□□□ 0.57
RPSA-204ENST00000458478 HECW2Q9P2P5 1572 aa18.6■□□□□ 0.57
RPSA-204ENST00000458478 CDK13Q14004 1512 aaKnown RBP18.6■□□□□ 0.57
RPSA-204ENST00000458478 FRMPD1Q5SYB0 1578 aa18.59■□□□□ 0.57
RPSA-204ENST00000458478 ARHGAP35Q9NRY4 1499 aa18.59■□□□□ 0.57
RPSA-204ENST00000458478 FANCAO15360 1455 aa18.58■□□□□ 0.57
RPSA-204ENST00000458478 DENND4BO75064 1496 aaPredicted RBP18.58■□□□□ 0.56
RPSA-204ENST00000458478 FMN1Q68DA7 1419 aa18.57■□□□□ 0.56
RPSA-204ENST00000458478 TTC37Q6PGP7 1564 aa18.56■□□□□ 0.56
RPSA-204ENST00000458478 ARID4BQ4LE39 1312 aaPredicted RBP18.56■□□□□ 0.56
RPSA-204ENST00000458478 ADAMTSL3P82987 1691 aa18.54■□□□□ 0.56
RPSA-204ENST00000458478 RICTORQ6R327 1708 aa18.54■□□□□ 0.56
RPSA-204ENST00000458478 CFAP74Q9C0B2 1584 aa18.52■□□□□ 0.56
RPSA-204ENST00000458478 PLCH2O75038 1416 aa18.52■□□□□ 0.56
RPSA-204ENST00000458478 CDK11AQ9UQ88 783 aaPredicted RBP18.52■□□□□ 0.56
RPSA-204ENST00000458478 PTPRMP28827 1452 aa18.52■□□□□ 0.55
RPSA-204ENST00000458478 HECW1Q76N89 1606 aa18.51■□□□□ 0.55
RPSA-204ENST00000458478 BCORL1Q5H9F3 1711 aa18.5■□□□□ 0.55
RPSA-204ENST00000458478 ILDR1Q86SU0 546 aaPredicted RBP18.5■□□□□ 0.55
RPSA-204ENST00000458478 EFCAB2Q5VUJ9 269 aa18.48■□□□□ 0.55
RPSA-204ENST00000458478 SCAPERQ9BY12 1400 aa18.48■□□□□ 0.55
RPSA-204ENST00000458478 ARHGEF40Q8TER5 1519 aa18.47■□□□□ 0.55
RPSA-204ENST00000458478 YEATS2Q9ULM3 1422 aa18.46■□□□□ 0.55
RPSA-204ENST00000458478 ZMYM4Q5VZL5 1548 aa18.45■□□□□ 0.54
RPSA-204ENST00000458478 MADDQ8WXG6 1647 aa18.45■□□□□ 0.54
RPSA-204ENST00000458478 TROQ12816 1431 aaPredicted RBP18.44■□□□□ 0.54
RPSA-204ENST00000458478 MAGI2Q86UL8 1455 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms