RNA–Protein interactions for RNA: ENST00000458478.5

RPSA-204, Transcript of ribosomal protein SA, humanhuman

TSL 2

Gene RPSA, Length 874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSA-204ENST00000458478 NISCHQ9Y2I1 1504 aa28.16■■■□□ 2.1
RPSA-204ENST00000458478 ABCC9O60706 1549 aa25.23■■□□□ 1.63
RPSA-204ENST00000458478 CCDC180Q9P1Z9 1646 aa25.19■■□□□ 1.62
RPSA-204ENST00000458478 RB1CC1Q8TDY2 1594 aa23.99■■□□□ 1.43
RPSA-204ENST00000458478 DCAF8L2P0C7V8 631 aa23.85■■□□□ 1.41
RPSA-204ENST00000458478 NACADO15069 1562 aa23.84■■□□□ 1.41
RPSA-204ENST00000458478 DNAJC5BQ9UF47 199 aa23.73■■□□□ 1.39
RPSA-204ENST00000458478 PABPN1Q86U42 306 aaKnown RBP eCLIP23.56■■□□□ 1.36
RPSA-204ENST00000458478 MYO15BQ96JP2 1530 aa23.52■■□□□ 1.36
RPSA-204ENST00000458478 UNC13AQ9UPW8 1703 aa23.45■■□□□ 1.34
RPSA-204ENST00000458478 BICRAQ9NZM4 1560 aa23.31■■□□□ 1.32
RPSA-204ENST00000458478 ZCCHC6Q5VYS8 1495 aaKnown RBP23.31■■□□□ 1.32
RPSA-204ENST00000458478 DCAF1Q9Y4B6 1507 aa23.23■■□□□ 1.31
RPSA-204ENST00000458478 SCRIBQ14160 1630 aa22.99■■□□□ 1.27
RPSA-204ENST00000458478 SHROOM4Q9ULL8 1493 aa22.93■■□□□ 1.26
RPSA-204ENST00000458478 CC2D2AQ9P2K1 1620 aa22.78■■□□□ 1.24
RPSA-204ENST00000458478 EIF4G1Q04637 1599 aaKnown RBP22.72■■□□□ 1.23
RPSA-204ENST00000458478 CECR2Q9BXF3 1484 aa22.72■■□□□ 1.23
RPSA-204ENST00000458478 NCAPD3P42695 1498 aa22.04■■□□□ 1.12
RPSA-204ENST00000458478 ATAD2BQ9ULI0 1458 aa21.98■■□□□ 1.11
RPSA-204ENST00000458478 SMARCA4P51532 1647 aa21.93■■□□□ 1.1
RPSA-204ENST00000458478 SMARCA2P51531 1590 aa21.88■■□□□ 1.09
RPSA-204ENST00000458478 BAZ1AQ9NRL2 1556 aaPredicted RBP21.82■■□□□ 1.08
RPSA-204ENST00000458478 HMGXB3Q12766 1538 aa21.82■■□□□ 1.08
RPSA-204ENST00000458478 ERCC6Q03468 1493 aa21.76■■□□□ 1.07
RPSA-204ENST00000458478 DNAJC5Q9H3Z4 198 aa21.74■■□□□ 1.07
RPSA-204ENST00000458478 BAZ1BQ9UIG0 1483 aaKnown RBP21.74■■□□□ 1.07
RPSA-204ENST00000458478 PEG3Q9GZU2 1588 aa21.72■■□□□ 1.07
RPSA-204ENST00000458478 MROH2BQ7Z745 1585 aa21.71■■□□□ 1.07
RPSA-204ENST00000458478 CUX2O14529 1486 aa21.7■■□□□ 1.06
RPSA-204ENST00000458478 NESP48681 1621 aa21.69■■□□□ 1.06
RPSA-204ENST00000458478 LAMC3Q9Y6N6 1575 aa21.5■■□□□ 1.03
RPSA-204ENST00000458478 WIZO95785 1651 aa21.45■■□□□ 1.02
RPSA-204ENST00000458478 THOC2Q8NI27 1593 aaKnown RBP21.41■■□□□ 1.02
RPSA-204ENST00000458478 PDS5BQ9NTI5 1447 aa21.41■■□□□ 1.02
RPSA-204ENST00000458478 CADPSQ9ULU8 1353 aa21.39■■□□□ 1.02
RPSA-204ENST00000458478 KIF21AQ7Z4S6 1674 aa21.37■■□□□ 1.01
RPSA-204ENST00000458478 RSF1Q96T23 1441 aaPredicted RBP21.29■■□□□ 1
RPSA-204ENST00000458478 MRC2Q9UBG0 1479 aa21.2■□□□□ 0.98
RPSA-204ENST00000458478 TOP2AP11388 1531 aaKnown RBP21.14■□□□□ 0.98
RPSA-204ENST00000458478 WDR62O43379 1518 aa21.14■□□□□ 0.97
RPSA-204ENST00000458478 CFTRP13569 1480 aa21.13■□□□□ 0.97
RPSA-204ENST00000458478 FANCD2Q9BXW9 1451 aa21.12■□□□□ 0.97
RPSA-204ENST00000458478 CEP164Q9UPV0 1460 aa21.12■□□□□ 0.97
RPSA-204ENST00000458478 CCDC88BA6NC98 1476 aa20.96■□□□□ 0.95
RPSA-204ENST00000458478 URB2Q14146 1524 aaKnown RBP20.95■□□□□ 0.94
RPSA-204ENST00000458478 PRDM2Q13029 1718 aa20.85■□□□□ 0.93
RPSA-204ENST00000458478 OSCARQ8IYS5 282 aa20.8■□□□□ 0.92
RPSA-204ENST00000458478 TRIM41Q8WV44 630 aa20.79■□□□□ 0.92
RPSA-204ENST00000458478 TOPBP1Q92547 1522 aa20.73■□□□□ 0.91
RPSA-204ENST00000458478 IFT140Q96RY7 1462 aa20.71■□□□□ 0.91
RPSA-204ENST00000458478 ZNF608Q9ULD9 1512 aaPredicted RBP20.7■□□□□ 0.9
RPSA-204ENST00000458478 ABCC8Q09428 1581 aa20.68■□□□□ 0.9
RPSA-204ENST00000458478 DNMBPQ6XZF7 1577 aa20.62■□□□□ 0.89
RPSA-204ENST00000458478 AQRO60306 1485 aaKnown RBP eCLIP20.54■□□□□ 0.88not detected■■■■■ 30.8
RPSA-204ENST00000458478 EIF4G3O43432 1585 aaKnown RBP20.53■□□□□ 0.88
RPSA-204ENST00000458478 TARBP1Q13395 1621 aaKnown RBP20.53■□□□□ 0.88
RPSA-204ENST00000458478 POLA1P09884 1462 aaPredicted RBP20.51■□□□□ 0.87
RPSA-204ENST00000458478 RAD54L2Q9Y4B4 1467 aa20.47■□□□□ 0.87
RPSA-204ENST00000458478 SOGA1O94964 1423 aa20.46■□□□□ 0.87
RPSA-204ENST00000458478 RIMBP3CA6NJZ7 1639 aa20.45■□□□□ 0.86
RPSA-204ENST00000458478 RIMBP3BA6NNM3 1639 aa20.45■□□□□ 0.86
RPSA-204ENST00000458478 RIMBP3Q9UFD9 1639 aa20.45■□□□□ 0.86
RPSA-204ENST00000458478 SUPT5HO00267 1087 aaKnown RBP20.43■□□□□ 0.86
RPSA-204ENST00000458478 TDRD9Q8NDG6 1382 aaKnown RBP20.43■□□□□ 0.86
RPSA-204ENST00000458478 FBLN2P98095 1184 aa20.42■□□□□ 0.86
RPSA-204ENST00000458478 ARHGEF11O15085 1522 aa20.39■□□□□ 0.85
RPSA-204ENST00000458478 FGD5Q6ZNL6 1462 aa20.39■□□□□ 0.85
RPSA-204ENST00000458478 CUX1P39880 1505 aa20.38■□□□□ 0.85
RPSA-204ENST00000458478 CHD1O14646 1710 aa20.38■□□□□ 0.85
RPSA-204ENST00000458478 CYB5RLQ6IPT4 315 aa20.32■□□□□ 0.84
RPSA-204ENST00000458478 SNAPC4Q5SXM2 1469 aa20.28■□□□□ 0.84
RPSA-204ENST00000458478 WDR97A6NE52 1622 aa20.27■□□□□ 0.84
RPSA-204ENST00000458478 CHMP7Q8WUX9 453 aaPredicted RBP20.27■□□□□ 0.84
RPSA-204ENST00000458478 GRIN2BQ13224 1484 aa20.24■□□□□ 0.83
RPSA-204ENST00000458478 MAGI1Q96QZ7 1491 aaPredicted RBP20.22■□□□□ 0.83
RPSA-204ENST00000458478 ARAP1Q96P48 1450 aa20.2■□□□□ 0.82
RPSA-204ENST00000458478 GAPVD1Q14C86 1478 aa20.18■□□□□ 0.82
RPSA-204ENST00000458478 SYNJ2O15056 1496 aa20.17■□□□□ 0.82
RPSA-204ENST00000458478 ABCA10Q8WWZ4 1543 aa20.16■□□□□ 0.82
RPSA-204ENST00000458478 CLASP1Q7Z460 1538 aa20.15■□□□□ 0.82
RPSA-204ENST00000458478 SYNJ1O43426 1573 aa20.14■□□□□ 0.81
RPSA-204ENST00000458478 PBRM1Q86U86 1689 aa20.13■□□□□ 0.81
RPSA-204ENST00000458478 WRNQ14191 1432 aaPredicted RBP eCLIP20.1■□□□□ 0.81not detected■■■■■ 33.4
RPSA-204ENST00000458478 ABCA5Q8WWZ7 1642 aa20.09■□□□□ 0.81
RPSA-204ENST00000458478 TRHP20396 242 aaPredicted RBP20.07■□□□□ 0.8
RPSA-204ENST00000458478 TOP2BQ02880 1626 aa20.05■□□□□ 0.8
RPSA-204ENST00000458478 BIVM-ERCC5R4GMW8 1640 aa20.03■□□□□ 0.8
RPSA-204ENST00000458478 GRIN2AQ12879 1464 aa19.97■□□□□ 0.79
RPSA-204ENST00000458478 ADAMTS12P58397 1594 aa19.93■□□□□ 0.78
RPSA-204ENST00000458478 FHAD1B1AJZ9 1412 aa19.93■□□□□ 0.78
RPSA-204ENST00000458478 NUP160Q12769 1436 aa19.91■□□□□ 0.78
RPSA-204ENST00000458478 CEP170Q5SW79 1584 aa19.9■□□□□ 0.78
RPSA-204ENST00000458478 ERICH3Q5RHP9 1530 aa19.89■□□□□ 0.77
RPSA-204ENST00000458478 ERCC6L2Q5T890 1561 aa19.88■□□□□ 0.77
RPSA-204ENST00000458478 SHROOM2Q13796 1616 aa19.8■□□□□ 0.76
RPSA-204ENST00000458478 JPH4Q96JJ6 628 aa19.78■□□□□ 0.76
RPSA-204ENST00000458478 PRG4Q92954 1404 aaPredicted RBP19.75■□□□□ 0.75
RPSA-204ENST00000458478 IGF1RP08069 1367 aa19.72■□□□□ 0.75
RPSA-204ENST00000458478 KIF27Q86VH2 1401 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms