RNA–Protein interactions for RNA: ENST00000458022.6

SHF-202, Transcript of Src homology 2 domain containing F, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHF, Length 1,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-202ENST00000458022 ABCC10Q5T3U5 1492 aa29.3■■■□□ 2.28
SHF-202ENST00000458022 FAM69CQ0P6D2 419 aa29.29■■■□□ 2.28
SHF-202ENST00000458022 MAPKBP1O60336 1514 aa29.25■■■□□ 2.27
SHF-202ENST00000458022 RUSC2Q8N2Y8 1516 aa29.25■■■□□ 2.27
SHF-202ENST00000458022 NPM1P06748 294 aaKnown RBP eCLIP29.25■■■□□ 2.27
SHF-202ENST00000458022 DIP2BQ9P265 1576 aa29.18■■■□□ 2.26
SHF-202ENST00000458022 ADCY10Q96PN6 1610 aa29.14■■■□□ 2.26
SHF-202ENST00000458022 KIAA0586Q9BVV6 1533 aa29.1■■■□□ 2.25
SHF-202ENST00000458022 KDM4FA0A1W2PPD8 638 aa29.05■■■□□ 2.24
SHF-202ENST00000458022 KDM6BO15054 1643 aa29.03■■■□□ 2.24
SHF-202ENST00000458022 IGF1RP08069 1367 aa29.02■■■□□ 2.24
SHF-202ENST00000458022 KIF27Q86VH2 1401 aa28.94■■■□□ 2.22
SHF-202ENST00000458022 PTPRGP23470 1445 aa28.93■■■□□ 2.22
SHF-202ENST00000458022 CUL7Q14999 1698 aa28.91■■■□□ 2.22
SHF-202ENST00000458022 ABCC2Q92887 1545 aa28.85■■■□□ 2.21
SHF-202ENST00000458022 TSPOAP1O95153 1857 aa28.85■■■□□ 2.21
SHF-202ENST00000458022 TNIKQ9UKE5 1360 aa28.84■■■□□ 2.21
SHF-202ENST00000458022 CARMIL2Q6F5E8 1435 aa28.81■■■□□ 2.2
SHF-202ENST00000458022 CARMIL1Q5VZK9 1371 aa28.8■■■□□ 2.2
SHF-202ENST00000458022 PLB1Q6P1J6 1458 aa28.79■■■□□ 2.2
SHF-202ENST00000458022 ASXL2Q76L83 1435 aa28.79■■■□□ 2.2
SHF-202ENST00000458022 TTBK1Q5TCY1 1321 aaPredicted RBP28.78■■■□□ 2.2
SHF-202ENST00000458022 GLI2P10070 1586 aa28.77■■■□□ 2.2
SHF-202ENST00000458022 UHRF1BP1LA0JNW5 1464 aa28.75■■■□□ 2.19
SHF-202ENST00000458022 PPRC1Q5VV67 1664 aaKnown RBP28.7■■■□□ 2.18
SHF-202ENST00000458022 UACAQ9BZF9 1416 aa28.69■■■□□ 2.18
SHF-202ENST00000458022 ILDR1Q86SU0 546 aaPredicted RBP28.69■■■□□ 2.18
SHF-202ENST00000458022 IQGAP2Q13576 1575 aa28.69■■■□□ 2.18
SHF-202ENST00000458022 ADGRL1O94910 1474 aa28.66■■■□□ 2.18
SHF-202ENST00000458022 DISP1Q96F81 1524 aa28.64■■■□□ 2.18
SHF-202ENST00000458022 COL17A1Q9UMD9 1497 aaPredicted RBP28.64■■■□□ 2.17
SHF-202ENST00000458022 EPRSP07814 1512 aaKnown RBP28.62■■■□□ 2.17
SHF-202ENST00000458022 KDM5BQ9UGL1 1544 aa28.62■■■□□ 2.17
SHF-202ENST00000458022 MAP3K4Q9Y6R4 1608 aa28.55■■■□□ 2.16
SHF-202ENST00000458022 TEX14Q8IWB6 1497 aa28.55■■■□□ 2.16
SHF-202ENST00000458022 UGGT2Q9NYU1 1516 aa28.53■■■□□ 2.16
SHF-202ENST00000458022 ZCCHC11Q5TAX3 1644 aaKnown RBP28.47■■■□□ 2.15
SHF-202ENST00000458022 RAPGEF2Q9Y4G8 1499 aa28.46■■■□□ 2.15
SHF-202ENST00000458022 KIAA0556O60303 1618 aa28.44■■■□□ 2.14
SHF-202ENST00000458022 WDR7Q9Y4E6 1490 aa28.43■■■□□ 2.14
SHF-202ENST00000458022 HECW2Q9P2P5 1572 aa28.41■■■□□ 2.14
SHF-202ENST00000458022 MAGI3Q5TCQ9 1506 aa28.33■■■□□ 2.13
SHF-202ENST00000458022 CD109Q6YHK3 1445 aa28.31■■■□□ 2.12
SHF-202ENST00000458022 GOLGA3Q08378 1498 aa28.25■■■□□ 2.11
SHF-202ENST00000458022 ABCA8O94911 1581 aa28.24■■■□□ 2.11
SHF-202ENST00000458022 CFAP43Q8NDM7 1665 aa28.23■■■□□ 2.11
SHF-202ENST00000458022 KCNH8Q96L42 1107 aa28.23■■■□□ 2.11
SHF-202ENST00000458022 CTTNBP2Q8WZ74 1663 aa28.14■■■□□ 2.1
SHF-202ENST00000458022 ARAP3Q8WWN8 1544 aa28.13■■■□□ 2.09
SHF-202ENST00000458022 KIF21BO75037 1637 aa28.08■■■□□ 2.09
SHF-202ENST00000458022 PRXQ9BXM0 1461 aa28.08■■■□□ 2.09
SHF-202ENST00000458022 PHLDB1Q86UU1 1377 aa28.03■■■□□ 2.08
SHF-202ENST00000458022 ATP10BO94823 1461 aa28.02■■■□□ 2.08
SHF-202ENST00000458022 FBXO41Q8TF61 875 aa28■■■□□ 2.07
SHF-202ENST00000458022 FAM9AQ8IZU1 332 aaPredicted RBP27.99■■■□□ 2.07
SHF-202ENST00000458022 PTPRMP28827 1452 aa27.97■■■□□ 2.07
SHF-202ENST00000458022 ARID3CA6NKF2 412 aa27.97■■■□□ 2.07
SHF-202ENST00000458022 ABCA9Q8IUA7 1624 aa27.95■■■□□ 2.06
SHF-202ENST00000458022 ADAMTSL3P82987 1691 aa27.94■■■□□ 2.06
SHF-202ENST00000458022 RAPGEF3O95398 923 aa27.92■■■□□ 2.06
SHF-202ENST00000458022 NEO1Q92859 1461 aa27.91■■■□□ 2.06
SHF-202ENST00000458022 P3H3Q8IVL6 736 aa27.91■■■□□ 2.06
SHF-202ENST00000458022 SAMD9Q5K651 1589 aa27.82■■■□□ 2.04
SHF-202ENST00000458022 FRMPD1Q5SYB0 1578 aa27.81■■■□□ 2.04
SHF-202ENST00000458022 BCORL1Q5H9F3 1711 aa27.79■■■□□ 2.04
SHF-202ENST00000458022 PCF11O94913 1555 aaKnown RBP27.79■■■□□ 2.04
SHF-202ENST00000458022 ARID4BQ4LE39 1312 aaPredicted RBP27.79■■■□□ 2.04
SHF-202ENST00000458022 RAPGEF6Q8TEU7 1601 aa27.78■■■□□ 2.04
SHF-202ENST00000458022 LMTK3Q96Q04 1460 aa27.77■■■□□ 2.04
SHF-202ENST00000458022 MADDQ8WXG6 1647 aa27.77■■■□□ 2.04
SHF-202ENST00000458022 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.76■■■□□ 2.03
SHF-202ENST00000458022 HNRNPUL2Q1KMD3 747 aaKnown RBP27.76■■■□□ 2.03
SHF-202ENST00000458022 NUP153P49790 1475 aaKnown RBP27.75■■■□□ 2.03
SHF-202ENST00000458022 ARHGEF40Q8TER5 1519 aa27.71■■■□□ 2.03
SHF-202ENST00000458022 CSRNP3Q8WYN3 585 aa27.7■■■□□ 2.02
SHF-202ENST00000458022 DENND4BO75064 1496 aaPredicted RBP27.7■■■□□ 2.02
SHF-202ENST00000458022 FHOD3Q2V2M9 1422 aa27.67■■■□□ 2.02
SHF-202ENST00000458022 AKNAQ7Z591 1439 aa27.66■■■□□ 2.02
SHF-202ENST00000458022 PLEKHD1A6NEE1 506 aa27.65■■■□□ 2.02
SHF-202ENST00000458022 FANCAO15360 1455 aa27.62■■■□□ 2.01
SHF-202ENST00000458022 RICTORQ6R327 1708 aa27.61■■■□□ 2.01
SHF-202ENST00000458022 RIMS1Q86UR5 1692 aaKnown RBP27.61■■■□□ 2.01
SHF-202ENST00000458022 POGZQ7Z3K3 1410 aa27.6■■■□□ 2.01
SHF-202ENST00000458022 ZMYM4Q5VZL5 1548 aa27.58■■■□□ 2.01
SHF-202ENST00000458022 HSPA2P54652 639 aa27.58■■■□□ 2.01
SHF-202ENST00000458022 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.57■■■□□ 2
SHF-202ENST00000458022 CFAP74Q9C0B2 1584 aa27.56■■■□□ 2
SHF-202ENST00000458022 YEATS2Q9ULM3 1422 aa27.55■■■□□ 2
SHF-202ENST00000458022 MAGI2Q86UL8 1455 aa27.55■■■□□ 2
SHF-202ENST00000458022 ZFYVE16Q7Z3T8 1539 aa27.53■■■□□ 2
SHF-202ENST00000458022 RANGAP1P46060 587 aaPredicted RBP27.53■■■□□ 2
SHF-202ENST00000458022 EFCAB5A4FU69 1503 aa27.52■■■□□ 2
SHF-202ENST00000458022 TTC37Q6PGP7 1564 aa27.5■■□□□ 1.99
SHF-202ENST00000458022 EEA1Q15075 1411 aa27.5■■□□□ 1.99
SHF-202ENST00000458022 PLPPR3Q6T4P5 718 aa27.49■■□□□ 1.99
SHF-202ENST00000458022 CERKQ8TCT0 537 aa27.47■■□□□ 1.99
SHF-202ENST00000458022 SIGLEC1Q9BZZ2 1709 aa27.47■■□□□ 1.99
SHF-202ENST00000458022 HECW1Q76N89 1606 aa27.45■■□□□ 1.98
SHF-202ENST00000458022 SCAPERQ9BY12 1400 aa27.43■■□□□ 1.98
SHF-202ENST00000458022 MLECQ14165 292 aa27.43■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms