RNA–Protein interactions for RNA: ENST00000457953.6

KCNMA1-216, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 3,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-216ENST00000457953 SLC4A1APQ9BWU0 796 aaKnown RBP18.75■□□□□ 0.59
KCNMA1-216ENST00000457953 VPS8Q8N3P4 1428 aa18.74■□□□□ 0.59
KCNMA1-216ENST00000457953 BIVM-ERCC5R4GMW8 1640 aa18.73■□□□□ 0.59
KCNMA1-216ENST00000457953 HNRNPUQ00839 825 aaKnown RBP eCLIP18.71■□□□□ 0.59
KCNMA1-216ENST00000457953 SUPT16HQ9Y5B9 1047 aaKnown RBP18.71■□□□□ 0.59
KCNMA1-216ENST00000457953 TSHZ2Q9NRE2 1034 aa18.7■□□□□ 0.58
KCNMA1-216ENST00000457953 HMGXB3Q12766 1538 aa18.68■□□□□ 0.58
KCNMA1-216ENST00000457953 RAPGEF2Q9Y4G8 1499 aa18.66■□□□□ 0.58
KCNMA1-216ENST00000457953 ERICH3Q5RHP9 1530 aa18.66■□□□□ 0.58
KCNMA1-216ENST00000457953 ANP32AP39687 249 aaKnown RBP18.63■□□□□ 0.57
KCNMA1-216ENST00000457953 SALL2Q9Y467 1007 aaPredicted RBP18.63■□□□□ 0.57
KCNMA1-216ENST00000457953 SENP3-EIF4A1A0A087X0R7 540 aa18.62■□□□□ 0.57
KCNMA1-216ENST00000457953 FAM9BQ8IZU0 186 aa18.62■□□□□ 0.57
KCNMA1-216ENST00000457953 NCAPD3P42695 1498 aa18.62■□□□□ 0.57
KCNMA1-216ENST00000457953 PRXQ9BXM0 1461 aa18.57■□□□□ 0.56
KCNMA1-216ENST00000457953 RRP7BPQ9NSQ0 103 aa18.56■□□□□ 0.56
KCNMA1-216ENST00000457953 KANK4Q5T7N3 995 aaPredicted RBP18.55■□□□□ 0.56
KCNMA1-216ENST00000457953 KIF27Q86VH2 1401 aa18.53■□□□□ 0.56
KCNMA1-216ENST00000457953 MTUS2Q5JR59 1369 aa18.52■□□□□ 0.56
KCNMA1-216ENST00000457953 CHMP7Q8WUX9 453 aaPredicted RBP18.52■□□□□ 0.55
KCNMA1-216ENST00000457953 ARXQ96QS3 562 aa18.5■□□□□ 0.55
KCNMA1-216ENST00000457953 CUX1P39880 1505 aa18.48■□□□□ 0.55
KCNMA1-216ENST00000457953 CUX2O14529 1486 aa18.47■□□□□ 0.55
KCNMA1-216ENST00000457953 PRKCSHP14314 528 aaPredicted RBP18.47■□□□□ 0.55
KCNMA1-216ENST00000457953 CFTRP13569 1480 aa18.47■□□□□ 0.55
KCNMA1-216ENST00000457953 SIN3AQ96ST3 1273 aa18.46■□□□□ 0.55
KCNMA1-216ENST00000457953 PRDM2Q13029 1718 aa18.46■□□□□ 0.55
KCNMA1-216ENST00000457953 ARAP1Q96P48 1450 aa18.45■□□□□ 0.54
KCNMA1-216ENST00000457953 TONSLQ96HA7 1378 aa18.43■□□□□ 0.54
KCNMA1-216ENST00000457953 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.41■□□□□ 0.54
KCNMA1-216ENST00000457953 CCDC136Q96JN2 1154 aa18.41■□□□□ 0.54
KCNMA1-216ENST00000457953 TDRD9Q8NDG6 1382 aaKnown RBP18.4■□□□□ 0.54
KCNMA1-216ENST00000457953 RTN4Q9NQC3 1192 aaKnown RBP18.4■□□□□ 0.54
KCNMA1-216ENST00000457953 CARMIL1Q5VZK9 1371 aa18.4■□□□□ 0.54
KCNMA1-216ENST00000457953 ZBTB47Q9UFB7 747 aaPredicted RBP18.4■□□□□ 0.54
KCNMA1-216ENST00000457953 SENP3Q9H4L4 574 aaPredicted RBP18.38■□□□□ 0.53
KCNMA1-216ENST00000457953 KCNH8Q96L42 1107 aa18.36■□□□□ 0.53
KCNMA1-216ENST00000457953 KDM2AQ9Y2K7 1162 aa18.36■□□□□ 0.53
KCNMA1-216ENST00000457953 RRBP1Q9P2E9 1410 aaKnown RBP18.34■□□□□ 0.53
KCNMA1-216ENST00000457953 CANXP27824 592 aaKnown RBP18.33■□□□□ 0.52
KCNMA1-216ENST00000457953 MRS2Q9HD23 443 aa18.31■□□□□ 0.52
KCNMA1-216ENST00000457953 ARHGAP35Q9NRY4 1499 aa18.28■□□□□ 0.52
KCNMA1-216ENST00000457953 DHX57Q6P158 1386 aaKnown RBP18.28■□□□□ 0.52
KCNMA1-216ENST00000457953 MAP3K1Q13233 1512 aa18.26■□□□□ 0.51
KCNMA1-216ENST00000457953 RBM19Q9Y4C8 960 aaKnown RBP18.26■□□□□ 0.51
KCNMA1-216ENST00000457953 CHGAP10645 457 aaKnown RBP18.24■□□□□ 0.51
KCNMA1-216ENST00000457953 CCNB3Q8WWL7 1395 aa18.22■□□□□ 0.51
KCNMA1-216ENST00000457953 CADPSQ9ULU8 1353 aa18.22■□□□□ 0.51
KCNMA1-216ENST00000457953 TSPY4P0CV99 314 aa18.21■□□□□ 0.51
KCNMA1-216ENST00000457953 TSPY10P0CW01 314 aa18.21■□□□□ 0.51
KCNMA1-216ENST00000457953 PLPPR3Q6T4P5 718 aa18.2■□□□□ 0.5
KCNMA1-216ENST00000457953 TMC1Q8TDI8 760 aa18.2■□□□□ 0.5
KCNMA1-216ENST00000457953 IGF1RP08069 1367 aa18.2■□□□□ 0.5
KCNMA1-216ENST00000457953 FOXD1Q16676 465 aa18.2■□□□□ 0.5
KCNMA1-216ENST00000457953 RGL3Q3MIN7 710 aa18.2■□□□□ 0.5
KCNMA1-216ENST00000457953 CFDP1Q9UEE9 299 aaPredicted RBP18.17■□□□□ 0.5
KCNMA1-216ENST00000457953 ERCC6Q03468 1493 aa18.16■□□□□ 0.5
KCNMA1-216ENST00000457953 TIAM1Q13009 1591 aa18.16■□□□□ 0.5
KCNMA1-216ENST00000457953 PLEKHD1A6NEE1 506 aa18.15■□□□□ 0.5
KCNMA1-216ENST00000457953 B4GALNT3Q6L9W6 998 aa18.15■□□□□ 0.5
KCNMA1-216ENST00000457953 LAS1LQ9Y4W2 734 aaKnown RBP18.14■□□□□ 0.49
KCNMA1-216ENST00000457953 FGD5Q6ZNL6 1462 aa18.14■□□□□ 0.49
KCNMA1-216ENST00000457953 FHOD3Q2V2M9 1422 aa18.12■□□□□ 0.49
KCNMA1-216ENST00000457953 DNAJC5BQ9UF47 199 aa18.12■□□□□ 0.49
KCNMA1-216ENST00000457953 FHAD1B1AJZ9 1412 aa18.1■□□□□ 0.49
KCNMA1-216ENST00000457953 MSH5O43196 834 aa18.08■□□□□ 0.49
KCNMA1-216ENST00000457953 HSP90AA1P07900 732 aaKnown RBP18.07■□□□□ 0.48
KCNMA1-216ENST00000457953 CFAP43Q8NDM7 1665 aa18.07■□□□□ 0.48
KCNMA1-216ENST00000457953 LRRC9Q6ZRR7 1453 aa18.06■□□□□ 0.48
KCNMA1-216ENST00000457953 SLC24A1O60721 1099 aa18.06■□□□□ 0.48
KCNMA1-216ENST00000457953 DNMBPQ6XZF7 1577 aa18.03■□□□□ 0.48
KCNMA1-216ENST00000457953 NPM1P06748 294 aaKnown RBP eCLIP18.03■□□□□ 0.48
KCNMA1-216ENST00000457953 EIF4G2P78344 907 aaKnown RBP eCLIP18.03■□□□□ 0.48
KCNMA1-216ENST00000457953 DEKP35659 375 aaKnown RBP18.03■□□□□ 0.48
KCNMA1-216ENST00000457953 RAB3GAP2Q9H2M9 1393 aa18.02■□□□□ 0.48
KCNMA1-216ENST00000457953 FANCD2Q9BXW9 1451 aa18.02■□□□□ 0.48
KCNMA1-216ENST00000457953 RAD54L2Q9Y4B4 1467 aa18.02■□□□□ 0.48
KCNMA1-216ENST00000457953 EFCAB5A4FU69 1503 aa18.02■□□□□ 0.48
KCNMA1-216ENST00000457953 CC2D2AQ9P2K1 1620 aa18.02■□□□□ 0.47
KCNMA1-216ENST00000457953 ABCA10Q8WWZ4 1543 aa18■□□□□ 0.47
KCNMA1-216ENST00000457953 CUL7Q14999 1698 aa17.99■□□□□ 0.47
KCNMA1-216ENST00000457953 SETD5Q9C0A6 1442 aa17.99■□□□□ 0.47
KCNMA1-216ENST00000457953 NEFMP07197 916 aa17.99■□□□□ 0.47
KCNMA1-216ENST00000457953 AQRO60306 1485 aaKnown RBP eCLIP17.97■□□□□ 0.47
KCNMA1-216ENST00000457953 PCF11O94913 1555 aaKnown RBP17.97■□□□□ 0.47
KCNMA1-216ENST00000457953 PDS5BQ9NTI5 1447 aa17.97■□□□□ 0.47
KCNMA1-216ENST00000457953 FYCO1Q9BQS8 1478 aa17.96■□□□□ 0.47
KCNMA1-216ENST00000457953 MAPKBP1O60336 1514 aa17.96■□□□□ 0.47
KCNMA1-216ENST00000457953 UPF2Q9HAU5 1272 aaKnown RBP17.96■□□□□ 0.47
KCNMA1-216ENST00000457953 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.95■□□□□ 0.46
KCNMA1-216ENST00000457953 GLIPR1L2Q4G1C9 344 aa17.95■□□□□ 0.46
KCNMA1-216ENST00000457953 NOP58Q9Y2X3 529 aaKnown RBP17.95■□□□□ 0.46
KCNMA1-216ENST00000457953 CTTNBP2Q8WZ74 1663 aa17.94■□□□□ 0.46
KCNMA1-216ENST00000457953 PHLDB1Q86UU1 1377 aa17.93■□□□□ 0.46
KCNMA1-216ENST00000457953 NESP48681 1621 aa17.93■□□□□ 0.46
KCNMA1-216ENST00000457953 TOPBP1Q92547 1522 aa17.93■□□□□ 0.46
KCNMA1-216ENST00000457953 ANP32BQ92688 251 aaKnown RBP17.92■□□□□ 0.46
KCNMA1-216ENST00000457953 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.92■□□□□ 0.46
KCNMA1-216ENST00000457953 CASKIN1Q8WXD9 1431 aa17.92■□□□□ 0.46
KCNMA1-216ENST00000457953 POLA1P09884 1462 aaPredicted RBP17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms