RNA–Protein interactions for RNA: ENST00000457953.6

KCNMA1-216, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 3,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-216ENST00000457953 NISCHQ9Y2I1 1504 aa25.62■■□□□ 1.69
KCNMA1-216ENST00000457953 DCAF8L2P0C7V8 631 aa23.87■■□□□ 1.41
KCNMA1-216ENST00000457953 SHROOM4Q9ULL8 1493 aa23■■□□□ 1.27
KCNMA1-216ENST00000457953 SUPT5HO00267 1087 aaKnown RBP22.92■■□□□ 1.26
KCNMA1-216ENST00000457953 EHMT2Q96KQ7 1210 aa22.07■■□□□ 1.12
KCNMA1-216ENST00000457953 CCDC180Q9P1Z9 1646 aa21.9■■□□□ 1.1
KCNMA1-216ENST00000457953 PCGF6Q9BYE7 350 aa21.77■■□□□ 1.08
KCNMA1-216ENST00000457953 ZCCHC6Q5VYS8 1495 aaKnown RBP21.71■■□□□ 1.07
KCNMA1-216ENST00000457953 FAM9AQ8IZU1 332 aaPredicted RBP21.56■■□□□ 1.04
KCNMA1-216ENST00000457953 HRCP23327 699 aa21.43■■□□□ 1.02
KCNMA1-216ENST00000457953 TTBK1Q5TCY1 1321 aaPredicted RBP21.31■■□□□ 1
KCNMA1-216ENST00000457953 DCAF1Q9Y4B6 1507 aa21.18■□□□□ 0.98
KCNMA1-216ENST00000457953 PELP1Q8IZL8 1130 aaKnown RBP21.14■□□□□ 0.97
KCNMA1-216ENST00000457953 PPARGC1BQ86YN6 1023 aaKnown RBP21.04■□□□□ 0.96
KCNMA1-216ENST00000457953 TRIM41Q8WV44 630 aa21■□□□□ 0.95
KCNMA1-216ENST00000457953 RANGAP1P46060 587 aaPredicted RBP20.96■□□□□ 0.95
KCNMA1-216ENST00000457953 LOC105371045A0A1W2PR82 267 aa20.88■□□□□ 0.93
KCNMA1-216ENST00000457953 CHIC1Q5VXU3 224 aa20.83■□□□□ 0.93
KCNMA1-216ENST00000457953 YTHDC1Q96MU7 727 aaKnown RBP20.82■□□□□ 0.92
KCNMA1-216ENST00000457953 CENPBP07199 599 aaPredicted RBP20.8■□□□□ 0.92
KCNMA1-216ENST00000457953 CCER1Q8TC90 406 aaPredicted RBP20.8■□□□□ 0.92
KCNMA1-216ENST00000457953 ABCC9O60706 1549 aa20.79■□□□□ 0.92
KCNMA1-216ENST00000457953 MYO15BQ96JP2 1530 aa20.69■□□□□ 0.9
KCNMA1-216ENST00000457953 ZEB1P37275 1124 aaPredicted RBP20.61■□□□□ 0.89
KCNMA1-216ENST00000457953 APLP2Q06481 763 aa20.59■□□□□ 0.89
KCNMA1-216ENST00000457953 PABPN1Q86U42 306 aaKnown RBP eCLIP20.58■□□□□ 0.88
KCNMA1-216ENST00000457953 UBTFP17480 764 aaKnown RBP20.54■□□□□ 0.88
KCNMA1-216ENST00000457953 SCAF1Q9H7N4 1312 aaKnown RBP20.45■□□□□ 0.86
KCNMA1-216ENST00000457953 MYT1Q01538 1121 aa20.41■□□□□ 0.86
KCNMA1-216ENST00000457953 TRIM26Q12899 539 aaPredicted RBP20.38■□□□□ 0.85
KCNMA1-216ENST00000457953 ERICH6Q7L0X2 663 aa20.37■□□□□ 0.85
KCNMA1-216ENST00000457953 ATP1B4Q9UN42 357 aaPredicted RBP20.32■□□□□ 0.84
KCNMA1-216ENST00000457953 SCRIBQ14160 1630 aa20.28■□□□□ 0.84
KCNMA1-216ENST00000457953 RSF1Q96T23 1441 aaPredicted RBP20.24■□□□□ 0.83
KCNMA1-216ENST00000457953 NACADO15069 1562 aa20.18■□□□□ 0.82
KCNMA1-216ENST00000457953 RB1CC1Q8TDY2 1594 aa20.13■□□□□ 0.81
KCNMA1-216ENST00000457953 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.12■□□□□ 0.81
KCNMA1-216ENST00000457953 NEFLP07196 543 aa20.04■□□□□ 0.8
KCNMA1-216ENST00000457953 GTF3C3Q9Y5Q9 886 aa19.98■□□□□ 0.79
KCNMA1-216ENST00000457953 ITGAEP38570 1179 aa19.97■□□□□ 0.79
KCNMA1-216ENST00000457953 HNRNPUL2Q1KMD3 747 aaKnown RBP19.95■□□□□ 0.78
KCNMA1-216ENST00000457953 DIEXFQ68CQ4 756 aaKnown RBP19.95■□□□□ 0.78
KCNMA1-216ENST00000457953 ACIN1Q9UKV3 1341 aaKnown RBP19.88■□□□□ 0.77
KCNMA1-216ENST00000457953 MROH2BQ7Z745 1585 aa19.83■□□□□ 0.77
KCNMA1-216ENST00000457953 CECR2Q9BXF3 1484 aa19.83■□□□□ 0.76
KCNMA1-216ENST00000457953 NEUROD1Q13562 356 aa19.82■□□□□ 0.76
KCNMA1-216ENST00000457953 CNGB1Q14028 1251 aaPredicted RBP19.8■□□□□ 0.76
KCNMA1-216ENST00000457953 BAZ1AQ9NRL2 1556 aaPredicted RBP19.74■□□□□ 0.75
KCNMA1-216ENST00000457953 WIZO95785 1651 aa19.73■□□□□ 0.75
KCNMA1-216ENST00000457953 BCANQ96GW7 911 aa19.73■□□□□ 0.75
KCNMA1-216ENST00000457953 EIF4G1Q04637 1599 aaKnown RBP19.61■□□□□ 0.73
KCNMA1-216ENST00000457953 POLR3GLQ9BT43 218 aa19.56■□□□□ 0.72
KCNMA1-216ENST00000457953 TOP2AP11388 1531 aaKnown RBP19.54■□□□□ 0.72
KCNMA1-216ENST00000457953 CSRNP3Q8WYN3 585 aa19.52■□□□□ 0.72
KCNMA1-216ENST00000457953 SMARCA4P51532 1647 aa19.5■□□□□ 0.71
KCNMA1-216ENST00000457953 P3H3Q8IVL6 736 aa19.5■□□□□ 0.71
KCNMA1-216ENST00000457953 UNC13AQ9UPW8 1703 aa19.44■□□□□ 0.7
KCNMA1-216ENST00000457953 ARID3CA6NKF2 412 aa19.39■□□□□ 0.69
KCNMA1-216ENST00000457953 SMARCA2P51531 1590 aa19.39■□□□□ 0.69
KCNMA1-216ENST00000457953 FAM50AQ14320 339 aaKnown RBP19.37■□□□□ 0.69
KCNMA1-216ENST00000457953 CCDC88BA6NC98 1476 aa19.36■□□□□ 0.69
KCNMA1-216ENST00000457953 ZNF316A6NFI3 1004 aaPredicted RBP19.29■□□□□ 0.68
KCNMA1-216ENST00000457953 EEA1Q15075 1411 aa19.28■□□□□ 0.68
KCNMA1-216ENST00000457953 DAXXQ9UER7 740 aaPredicted RBP19.26■□□□□ 0.67
KCNMA1-216ENST00000457953 ABCC8Q09428 1581 aa19.26■□□□□ 0.67
KCNMA1-216ENST00000457953 FBLN2P98095 1184 aa19.26■□□□□ 0.67
KCNMA1-216ENST00000457953 WRNQ14191 1432 aaPredicted RBP eCLIP19.25■□□□□ 0.67
KCNMA1-216ENST00000457953 PEG3Q9GZU2 1588 aa19.21■□□□□ 0.67
KCNMA1-216ENST00000457953 RTL5Q5HYW3 569 aaPredicted RBP19.21■□□□□ 0.67
KCNMA1-216ENST00000457953 TNIKQ9UKE5 1360 aa19.17■□□□□ 0.66
KCNMA1-216ENST00000457953 BICRAQ9NZM4 1560 aa19.17■□□□□ 0.66
KCNMA1-216ENST00000457953 CEP162Q5TB80 1403 aa19.13■□□□□ 0.65
KCNMA1-216ENST00000457953 MYT1LQ9UL68 1186 aa19.1■□□□□ 0.65
KCNMA1-216ENST00000457953 SOGA1O94964 1423 aa19.09■□□□□ 0.65
KCNMA1-216ENST00000457953 BCL11AQ9H165 835 aa19.08■□□□□ 0.65
KCNMA1-216ENST00000457953 GOLGA3Q08378 1498 aa19.05■□□□□ 0.64
KCNMA1-216ENST00000457953 TRIM52Q96A61 297 aa19.03■□□□□ 0.64
KCNMA1-216ENST00000457953 FKBP8Q14318 412 aa19.02■□□□□ 0.64
KCNMA1-216ENST00000457953 CDK11AQ9UQ88 783 aaPredicted RBP19.01■□□□□ 0.63
KCNMA1-216ENST00000457953 MIER1Q8N108 512 aa18.97■□□□□ 0.63
KCNMA1-216ENST00000457953 CLSPNQ9HAW4 1339 aa18.97■□□□□ 0.63
KCNMA1-216ENST00000457953 KIF21BO75037 1637 aa18.96■□□□□ 0.63
KCNMA1-216ENST00000457953 RUSC2Q8N2Y8 1516 aa18.96■□□□□ 0.63
KCNMA1-216ENST00000457953 CEP164Q9UPV0 1460 aa18.95■□□□□ 0.62
KCNMA1-216ENST00000457953 ANP32CO43423 234 aa18.94■□□□□ 0.62
KCNMA1-216ENST00000457953 ATAD2BQ9ULI0 1458 aa18.94■□□□□ 0.62
KCNMA1-216ENST00000457953 ANP32EQ9BTT0 268 aa18.91■□□□□ 0.62
KCNMA1-216ENST00000457953 SYNJ1O43426 1573 aa18.91■□□□□ 0.62
KCNMA1-216ENST00000457953 BAZ1BQ9UIG0 1483 aaKnown RBP18.9■□□□□ 0.62
KCNMA1-216ENST00000457953 ZNF326Q5BKZ1 582 aaKnown RBP18.89■□□□□ 0.61
KCNMA1-216ENST00000457953 CLIP1P30622 1438 aa18.86■□□□□ 0.61
KCNMA1-216ENST00000457953 ZNF777Q9ULD5 760 aaPredicted RBP18.84■□□□□ 0.61
KCNMA1-216ENST00000457953 EIF5BO60841 1220 aaKnown RBP18.84■□□□□ 0.61
KCNMA1-216ENST00000457953 DDX10Q13206 875 aaKnown RBP18.84■□□□□ 0.61
KCNMA1-216ENST00000457953 NPM2Q86SE8 214 aaKnown RBP18.84■□□□□ 0.61
KCNMA1-216ENST00000457953 CHIC2Q9UKJ5 165 aa18.81■□□□□ 0.6
KCNMA1-216ENST00000457953 IRX6P78412 446 aaPredicted RBP18.79■□□□□ 0.6
KCNMA1-216ENST00000457953 NBR1Q14596 966 aa18.78■□□□□ 0.6
KCNMA1-216ENST00000457953 HIRIP3Q9BW71 556 aaPredicted RBP18.77■□□□□ 0.6
KCNMA1-216ENST00000457953 TOP2BQ02880 1626 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms