RNA–Protein interactions for RNA: ENST00000457924.2

UPF3AP2-201, Transcript of UPF3A pseudogene 2, humanhuman

BASIC

Gene UPF3AP2, Length 1,132 nt, Biotype transcribed processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP2-201ENST00000457924 NUP160Q12769 1436 aa25.81■■□□□ 1.72
UPF3AP2-201ENST00000457924 PPP4R3CPQ6ZMV5 832 aa25.8■■□□□ 1.72
UPF3AP2-201ENST00000457924 TOP2BQ02880 1626 aa25.8■■□□□ 1.72
UPF3AP2-201ENST00000457924 BIVM-ERCC5R4GMW8 1640 aa25.8■■□□□ 1.72
UPF3AP2-201ENST00000457924 FHAD1B1AJZ9 1412 aa25.78■■□□□ 1.72
UPF3AP2-201ENST00000457924 SHROOM2Q13796 1616 aa25.74■■□□□ 1.71
UPF3AP2-201ENST00000457924 ERICH3Q5RHP9 1530 aa25.72■■□□□ 1.71
UPF3AP2-201ENST00000457924 PRG4Q92954 1404 aaPredicted RBP25.61■■□□□ 1.69
UPF3AP2-201ENST00000457924 JPH4Q96JJ6 628 aa25.57■■□□□ 1.68
UPF3AP2-201ENST00000457924 KIF13AQ9H1H9 1805 aa25.56■■□□□ 1.68
UPF3AP2-201ENST00000457924 SCAF1Q9H7N4 1312 aaKnown RBP25.54■■□□□ 1.68
UPF3AP2-201ENST00000457924 RUSC2Q8N2Y8 1516 aa25.49■■□□□ 1.67
UPF3AP2-201ENST00000457924 NPM1P06748 294 aaKnown RBP eCLIP25.45■■□□□ 1.66
UPF3AP2-201ENST00000457924 FAM69CQ0P6D2 419 aa25.41■■□□□ 1.66
UPF3AP2-201ENST00000457924 MAPK8IP2Q13387 824 aaPredicted RBP25.41■■□□□ 1.66
UPF3AP2-201ENST00000457924 ABCC10Q5T3U5 1492 aa25.4■■□□□ 1.66
UPF3AP2-201ENST00000457924 MAPKBP1O60336 1514 aa25.38■■□□□ 1.65
UPF3AP2-201ENST00000457924 ADCY10Q96PN6 1610 aa25.34■■□□□ 1.65
UPF3AP2-201ENST00000457924 KIAA0586Q9BVV6 1533 aa25.33■■□□□ 1.65
UPF3AP2-201ENST00000457924 DIP2BQ9P265 1576 aa25.32■■□□□ 1.64
UPF3AP2-201ENST00000457924 CUL7Q14999 1698 aa25.31■■□□□ 1.64
UPF3AP2-201ENST00000457924 IGF1RP08069 1367 aa25.31■■□□□ 1.64
UPF3AP2-201ENST00000457924 KIF27Q86VH2 1401 aa25.3■■□□□ 1.64
UPF3AP2-201ENST00000457924 KDM6BO15054 1643 aa25.21■■□□□ 1.63
UPF3AP2-201ENST00000457924 TSPOAP1O95153 1857 aa25.2■■□□□ 1.62
UPF3AP2-201ENST00000457924 KCNA4P22459 653 aa25.19■■□□□ 1.62
UPF3AP2-201ENST00000457924 PTPRGP23470 1445 aa25.17■■□□□ 1.62
UPF3AP2-201ENST00000457924 CARMIL1Q5VZK9 1371 aa25.15■■□□□ 1.62
UPF3AP2-201ENST00000457924 TTBK1Q5TCY1 1321 aaPredicted RBP25.13■■□□□ 1.61
UPF3AP2-201ENST00000457924 CARMIL2Q6F5E8 1435 aa25.12■■□□□ 1.61
UPF3AP2-201ENST00000457924 TNIKQ9UKE5 1360 aa25.1■■□□□ 1.61
UPF3AP2-201ENST00000457924 ABCC2Q92887 1545 aa25.07■■□□□ 1.6
UPF3AP2-201ENST00000457924 CNKSR2Q8WXI2 1034 aa25.07■■□□□ 1.6
UPF3AP2-201ENST00000457924 NCBP3Q53F19 620 aaKnown RBP25.06■■□□□ 1.6
UPF3AP2-201ENST00000457924 IQGAP2Q13576 1575 aa25.05■■□□□ 1.6
UPF3AP2-201ENST00000457924 KDM4FA0A1W2PPD8 638 aa25.05■■□□□ 1.6
UPF3AP2-201ENST00000457924 DMRT2Q9Y5R5 561 aa25.05■■□□□ 1.6
UPF3AP2-201ENST00000457924 ASXL2Q76L83 1435 aa25.02■■□□□ 1.6
UPF3AP2-201ENST00000457924 PLB1Q6P1J6 1458 aa25.02■■□□□ 1.6
UPF3AP2-201ENST00000457924 UHRF1BP1LA0JNW5 1464 aa24.99■■□□□ 1.59
UPF3AP2-201ENST00000457924 GLI2P10070 1586 aa24.99■■□□□ 1.59
UPF3AP2-201ENST00000457924 UACAQ9BZF9 1416 aa24.97■■□□□ 1.59
UPF3AP2-201ENST00000457924 PPRC1Q5VV67 1664 aaKnown RBP24.95■■□□□ 1.58
UPF3AP2-201ENST00000457924 DISP1Q96F81 1524 aa24.94■■□□□ 1.58
UPF3AP2-201ENST00000457924 RAPGEF2Q9Y4G8 1499 aa24.89■■□□□ 1.57
UPF3AP2-201ENST00000457924 UGGT2Q9NYU1 1516 aa24.87■■□□□ 1.57
UPF3AP2-201ENST00000457924 KDM5BQ9UGL1 1544 aa24.87■■□□□ 1.57
UPF3AP2-201ENST00000457924 EPRSP07814 1512 aaKnown RBP24.86■■□□□ 1.57
UPF3AP2-201ENST00000457924 ZCCHC11Q5TAX3 1644 aaKnown RBP24.84■■□□□ 1.57
UPF3AP2-201ENST00000457924 MAP3K4Q9Y6R4 1608 aa24.84■■□□□ 1.57
UPF3AP2-201ENST00000457924 KIAA0556O60303 1618 aa24.83■■□□□ 1.57
UPF3AP2-201ENST00000457924 TEX14Q8IWB6 1497 aa24.82■■□□□ 1.56
UPF3AP2-201ENST00000457924 ADGRL1O94910 1474 aa24.8■■□□□ 1.56
UPF3AP2-201ENST00000457924 COL17A1Q9UMD9 1497 aaPredicted RBP24.78■■□□□ 1.56
UPF3AP2-201ENST00000457924 NPM3O75607 178 aaKnown RBP24.77■■□□□ 1.56
UPF3AP2-201ENST00000457924 CTTNBP2Q8WZ74 1663 aa24.72■■□□□ 1.55
UPF3AP2-201ENST00000457924 WDR7Q9Y4E6 1490 aa24.72■■□□□ 1.55
UPF3AP2-201ENST00000457924 GOLGA3Q08378 1498 aa24.69■■□□□ 1.54
UPF3AP2-201ENST00000457924 CFAP43Q8NDM7 1665 aa24.62■■□□□ 1.53
UPF3AP2-201ENST00000457924 ABCA8O94911 1581 aa24.62■■□□□ 1.53
UPF3AP2-201ENST00000457924 CD109Q6YHK3 1445 aa24.61■■□□□ 1.53
UPF3AP2-201ENST00000457924 ILDR1Q86SU0 546 aaPredicted RBP24.61■■□□□ 1.53
UPF3AP2-201ENST00000457924 KCNH8Q96L42 1107 aa24.61■■□□□ 1.53
UPF3AP2-201ENST00000457924 RNF216Q9NWF9 866 aaPredicted RBP24.61■■□□□ 1.53
UPF3AP2-201ENST00000457924 MAGI3Q5TCQ9 1506 aa24.61■■□□□ 1.53
UPF3AP2-201ENST00000457924 HECW2Q9P2P5 1572 aa24.56■■□□□ 1.52
UPF3AP2-201ENST00000457924 HOXD11P31277 338 aaPredicted RBP24.54■■□□□ 1.52
UPF3AP2-201ENST00000457924 PRXQ9BXM0 1461 aa24.53■■□□□ 1.52
UPF3AP2-201ENST00000457924 FAM9AQ8IZU1 332 aaPredicted RBP24.53■■□□□ 1.52
UPF3AP2-201ENST00000457924 POTEDQ86YR6 584 aa24.51■■□□□ 1.51
UPF3AP2-201ENST00000457924 ARID3CA6NKF2 412 aa24.44■■□□□ 1.5
UPF3AP2-201ENST00000457924 KIF21BO75037 1637 aa24.43■■□□□ 1.5
UPF3AP2-201ENST00000457924 ARAP3Q8WWN8 1544 aa24.42■■□□□ 1.5
UPF3AP2-201ENST00000457924 P3H3Q8IVL6 736 aa24.42■■□□□ 1.5
UPF3AP2-201ENST00000457924 ATP10BO94823 1461 aa24.4■■□□□ 1.5
UPF3AP2-201ENST00000457924 ABCA9Q8IUA7 1624 aa24.36■■□□□ 1.49
UPF3AP2-201ENST00000457924 PHLDB1Q86UU1 1377 aa24.36■■□□□ 1.49
UPF3AP2-201ENST00000457924 SAMD9Q5K651 1589 aa24.32■■□□□ 1.48
UPF3AP2-201ENST00000457924 RAPGEF6Q8TEU7 1601 aa24.32■■□□□ 1.48
UPF3AP2-201ENST00000457924 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.3■■□□□ 1.48
UPF3AP2-201ENST00000457924 HNRNPUL2Q1KMD3 747 aaKnown RBP24.3■■□□□ 1.48
UPF3AP2-201ENST00000457924 CSRNP3Q8WYN3 585 aa24.29■■□□□ 1.48
UPF3AP2-201ENST00000457924 NEO1Q92859 1461 aa24.27■■□□□ 1.48
UPF3AP2-201ENST00000457924 RAPGEF3O95398 923 aa24.27■■□□□ 1.48
UPF3AP2-201ENST00000457924 ADAMTSL3P82987 1691 aa24.24■■□□□ 1.47
UPF3AP2-201ENST00000457924 PTPRMP28827 1452 aa24.23■■□□□ 1.47
UPF3AP2-201ENST00000457924 NUP153P49790 1475 aaKnown RBP24.19■■□□□ 1.46
UPF3AP2-201ENST00000457924 ARID4BQ4LE39 1312 aaPredicted RBP24.18■■□□□ 1.46
UPF3AP2-201ENST00000457924 FRMPD1Q5SYB0 1578 aa24.18■■□□□ 1.46
UPF3AP2-201ENST00000457924 RANGAP1P46060 587 aaPredicted RBP24.18■■□□□ 1.46
UPF3AP2-201ENST00000457924 BCORL1Q5H9F3 1711 aa24.18■■□□□ 1.46
UPF3AP2-201ENST00000457924 PLEKHD1A6NEE1 506 aa24.14■■□□□ 1.45
UPF3AP2-201ENST00000457924 FHOD3Q2V2M9 1422 aa24.14■■□□□ 1.45
UPF3AP2-201ENST00000457924 EEA1Q15075 1411 aa24.13■■□□□ 1.45
UPF3AP2-201ENST00000457924 MADDQ8WXG6 1647 aa24.13■■□□□ 1.45
UPF3AP2-201ENST00000457924 FBXO41Q8TF61 875 aa24.11■■□□□ 1.45
UPF3AP2-201ENST00000457924 DENND4BO75064 1496 aaPredicted RBP24.11■■□□□ 1.45
UPF3AP2-201ENST00000457924 CFAP74Q9C0B2 1584 aa24.09■■□□□ 1.45
UPF3AP2-201ENST00000457924 ARHGEF40Q8TER5 1519 aa24.09■■□□□ 1.45
UPF3AP2-201ENST00000457924 RICTORQ6R327 1708 aa24.08■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms