RNA–Protein interactions for RNA: ENST00000457924.2

UPF3AP2-201, Transcript of UPF3A pseudogene 2, humanhuman

BASIC

Gene UPF3AP2, Length 1,132 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP2-201ENST00000457924 AEBP2Q6ZN18 517 aaPredicted RBP37.02■■■■□ 3.52
UPF3AP2-201ENST00000457924 NISCHQ9Y2I1 1504 aa36.29■■■■□ 3.4
UPF3AP2-201ENST00000457924 CHIC1Q5VXU3 224 aa36.1■■■■□ 3.37
UPF3AP2-201ENST00000457924 ABCC9O60706 1549 aa32.96■■■□□ 2.87
UPF3AP2-201ENST00000457924 CCDC180Q9P1Z9 1646 aa32.71■■■□□ 2.83
UPF3AP2-201ENST00000457924 PHF23Q9BUL5 403 aaPredicted RBP31.78■■■□□ 2.68
UPF3AP2-201ENST00000457924 SENP3Q9H4L4 574 aaPredicted RBP31.34■■■□□ 2.61
UPF3AP2-201ENST00000457924 RB1CC1Q8TDY2 1594 aa31.27■■■□□ 2.6
UPF3AP2-201ENST00000457924 DNAJC5BQ9UF47 199 aa31.13■■■□□ 2.57
UPF3AP2-201ENST00000457924 NACADO15069 1562 aa30.99■■■□□ 2.55
UPF3AP2-201ENST00000457924 DCAF8L2P0C7V8 631 aa30.79■■■□□ 2.52
UPF3AP2-201ENST00000457924 PABPN1Q86U42 306 aaKnown RBP eCLIP30.64■■■□□ 2.5
UPF3AP2-201ENST00000457924 UNC13AQ9UPW8 1703 aa30.56■■■□□ 2.48
UPF3AP2-201ENST00000457924 MYO15BQ96JP2 1530 aa30.46■■■□□ 2.47
UPF3AP2-201ENST00000457924 BICRAQ9NZM4 1560 aa30.32■■■□□ 2.45
UPF3AP2-201ENST00000457924 ZCCHC6Q5VYS8 1495 aaKnown RBP30■■■□□ 2.39
UPF3AP2-201ENST00000457924 DCAF1Q9Y4B6 1507 aa29.96■■■□□ 2.39
UPF3AP2-201ENST00000457924 SHROOM4Q9ULL8 1493 aa29.93■■■□□ 2.38
UPF3AP2-201ENST00000457924 SCRIBQ14160 1630 aa29.78■■■□□ 2.36
UPF3AP2-201ENST00000457924 CC2D2AQ9P2K1 1620 aa29.77■■■□□ 2.36
UPF3AP2-201ENST00000457924 CECR2Q9BXF3 1484 aa29.73■■■□□ 2.35
UPF3AP2-201ENST00000457924 EIF4G1Q04637 1599 aaKnown RBP29.63■■■□□ 2.33
UPF3AP2-201ENST00000457924 PLPPR3Q6T4P5 718 aa29.27■■■□□ 2.28
UPF3AP2-201ENST00000457924 FOXD1Q16676 465 aa29.14■■■□□ 2.26
UPF3AP2-201ENST00000457924 DNAJC5Q9H3Z4 198 aa28.83■■■□□ 2.21
UPF3AP2-201ENST00000457924 NCAPD3P42695 1498 aa28.59■■■□□ 2.17
UPF3AP2-201ENST00000457924 CUX2O14529 1486 aa28.53■■■□□ 2.16
UPF3AP2-201ENST00000457924 ERCC6Q03468 1493 aa28.51■■■□□ 2.15
UPF3AP2-201ENST00000457924 ATAD2BQ9ULI0 1458 aa28.46■■■□□ 2.15
UPF3AP2-201ENST00000457924 SMARCA2P51531 1590 aa28.39■■■□□ 2.14
UPF3AP2-201ENST00000457924 SMARCA4P51532 1647 aa28.37■■■□□ 2.13
UPF3AP2-201ENST00000457924 HMGXB3Q12766 1538 aa28.36■■■□□ 2.13
UPF3AP2-201ENST00000457924 NESP48681 1621 aa28.21■■■□□ 2.11
UPF3AP2-201ENST00000457924 BAZ1AQ9NRL2 1556 aaPredicted RBP28.2■■■□□ 2.11
UPF3AP2-201ENST00000457924 BAZ1BQ9UIG0 1483 aaKnown RBP28.19■■■□□ 2.1
UPF3AP2-201ENST00000457924 PEG3Q9GZU2 1588 aa28.09■■■□□ 2.09
UPF3AP2-201ENST00000457924 PPP6R1Q9UPN7 881 aa28.05■■■□□ 2.08
UPF3AP2-201ENST00000457924 LAMC3Q9Y6N6 1575 aa28.01■■■□□ 2.07
UPF3AP2-201ENST00000457924 THOC2Q8NI27 1593 aaKnown RBP28■■■□□ 2.07
UPF3AP2-201ENST00000457924 ADRA2BP18089 450 aa27.98■■■□□ 2.07
UPF3AP2-201ENST00000457924 MROH2BQ7Z745 1585 aa27.94■■■□□ 2.06
UPF3AP2-201ENST00000457924 KIF21AQ7Z4S6 1674 aa27.87■■■□□ 2.05
UPF3AP2-201ENST00000457924 PDS5BQ9NTI5 1447 aa27.86■■■□□ 2.05
UPF3AP2-201ENST00000457924 CADPSQ9ULU8 1353 aa27.72■■■□□ 2.03
UPF3AP2-201ENST00000457924 MRC2Q9UBG0 1479 aa27.63■■■□□ 2.01
UPF3AP2-201ENST00000457924 WIZO95785 1651 aa27.62■■■□□ 2.01
UPF3AP2-201ENST00000457924 WDR62O43379 1518 aa27.57■■■□□ 2
UPF3AP2-201ENST00000457924 CEP164Q9UPV0 1460 aa27.46■■□□□ 1.99
UPF3AP2-201ENST00000457924 TRIM41Q8WV44 630 aa27.46■■□□□ 1.99
UPF3AP2-201ENST00000457924 PIAS4Q8N2W9 510 aaPredicted RBP27.41■■□□□ 1.98
UPF3AP2-201ENST00000457924 FANCD2Q9BXW9 1451 aa27.4■■□□□ 1.98
UPF3AP2-201ENST00000457924 CFTRP13569 1480 aa27.33■■□□□ 1.97
UPF3AP2-201ENST00000457924 RSF1Q96T23 1441 aaPredicted RBP27.26■■□□□ 1.95
UPF3AP2-201ENST00000457924 TOP2AP11388 1531 aaKnown RBP27.25■■□□□ 1.95
UPF3AP2-201ENST00000457924 OSCARQ8IYS5 282 aa27.21■■□□□ 1.95
UPF3AP2-201ENST00000457924 URB2Q14146 1524 aaKnown RBP27.18■■□□□ 1.94
UPF3AP2-201ENST00000457924 PRDM2Q13029 1718 aa27.08■■□□□ 1.93
UPF3AP2-201ENST00000457924 CCDC88BA6NC98 1476 aa26.93■■□□□ 1.9
UPF3AP2-201ENST00000457924 IFT140Q96RY7 1462 aa26.93■■□□□ 1.9
UPF3AP2-201ENST00000457924 ZNF608Q9ULD9 1512 aaPredicted RBP26.89■■□□□ 1.89
UPF3AP2-201ENST00000457924 RIMBP3CA6NJZ7 1639 aa26.86■■□□□ 1.89
UPF3AP2-201ENST00000457924 RIMBP3BA6NNM3 1639 aa26.86■■□□□ 1.89
UPF3AP2-201ENST00000457924 RIMBP3Q9UFD9 1639 aa26.86■■□□□ 1.89
UPF3AP2-201ENST00000457924 TOPBP1Q92547 1522 aa26.85■■□□□ 1.89
UPF3AP2-201ENST00000457924 MSH5O43196 834 aa26.83■■□□□ 1.89
UPF3AP2-201ENST00000457924 ABCC8Q09428 1581 aa26.8■■□□□ 1.88
UPF3AP2-201ENST00000457924 EIF4G3O43432 1585 aaKnown RBP26.75■■□□□ 1.87
UPF3AP2-201ENST00000457924 ARHGEF11O15085 1522 aa26.74■■□□□ 1.87
UPF3AP2-201ENST00000457924 DNMBPQ6XZF7 1577 aa26.73■■□□□ 1.87
UPF3AP2-201ENST00000457924 TARBP1Q13395 1621 aaKnown RBP26.62■■□□□ 1.85
UPF3AP2-201ENST00000457924 CHD1O14646 1710 aa26.62■■□□□ 1.85
UPF3AP2-201ENST00000457924 AQRO60306 1485 aaKnown RBP eCLIP26.62■■□□□ 1.85
UPF3AP2-201ENST00000457924 CYB5RLQ6IPT4 315 aa26.58■■□□□ 1.85
UPF3AP2-201ENST00000457924 POLA1P09884 1462 aaPredicted RBP26.55■■□□□ 1.84
UPF3AP2-201ENST00000457924 FBLN2P98095 1184 aa26.54■■□□□ 1.84
UPF3AP2-201ENST00000457924 RAD54L2Q9Y4B4 1467 aa26.46■■□□□ 1.83
UPF3AP2-201ENST00000457924 ARAP1Q96P48 1450 aa26.44■■□□□ 1.82
UPF3AP2-201ENST00000457924 SOGA1O94964 1423 aa26.44■■□□□ 1.82
UPF3AP2-201ENST00000457924 TDRD9Q8NDG6 1382 aaKnown RBP26.42■■□□□ 1.82
UPF3AP2-201ENST00000457924 TRHP20396 242 aaPredicted RBP26.39■■□□□ 1.82
UPF3AP2-201ENST00000457924 WDR97A6NE52 1622 aa26.37■■□□□ 1.81
UPF3AP2-201ENST00000457924 FGD5Q6ZNL6 1462 aa26.36■■□□□ 1.81
UPF3AP2-201ENST00000457924 SNAPC4Q5SXM2 1469 aa26.35■■□□□ 1.81
UPF3AP2-201ENST00000457924 CHMP7Q8WUX9 453 aaPredicted RBP26.3■■□□□ 1.8
UPF3AP2-201ENST00000457924 MAGI1Q96QZ7 1491 aaPredicted RBP26.28■■□□□ 1.8
UPF3AP2-201ENST00000457924 CLASP1Q7Z460 1538 aa26.28■■□□□ 1.8
UPF3AP2-201ENST00000457924 CUX1P39880 1505 aa26.27■■□□□ 1.8
UPF3AP2-201ENST00000457924 SYNJ1O43426 1573 aa26.27■■□□□ 1.8
UPF3AP2-201ENST00000457924 GRIN2BQ13224 1484 aa26.24■■□□□ 1.79
UPF3AP2-201ENST00000457924 SYNJ2O15056 1496 aa26.19■■□□□ 1.78
UPF3AP2-201ENST00000457924 PBRM1Q86U86 1689 aa26.14■■□□□ 1.78
UPF3AP2-201ENST00000457924 GAPVD1Q14C86 1478 aa26.11■■□□□ 1.77
UPF3AP2-201ENST00000457924 ABCA10Q8WWZ4 1543 aa26.04■■□□□ 1.76
UPF3AP2-201ENST00000457924 ABCA5Q8WWZ7 1642 aa26.03■■□□□ 1.76
UPF3AP2-201ENST00000457924 GRIN2AQ12879 1464 aa25.9■■□□□ 1.74
UPF3AP2-201ENST00000457924 WRNQ14191 1432 aaPredicted RBP eCLIP25.89■■□□□ 1.74
UPF3AP2-201ENST00000457924 SUPT5HO00267 1087 aaKnown RBP25.89■■□□□ 1.74
UPF3AP2-201ENST00000457924 ADAMTS12P58397 1594 aa25.85■■□□□ 1.73
UPF3AP2-201ENST00000457924 ERCC6L2Q5T890 1561 aa25.83■■□□□ 1.73
UPF3AP2-201ENST00000457924 CEP170Q5SW79 1584 aa25.82■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms