RNA–Protein interactions for RNA: ENST00000457461.1

CUBNP3-201, Transcript of cubilin pseudogene 3, humanhuman

BASIC

Gene CUBNP3, Length 1,784 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNP3-201ENST00000457461 EHMT2Q96KQ7 1210 aa10.37□□□□□ -0.75
CUBNP3-201ENST00000457461 TNIKQ9UKE5 1360 aa10.36□□□□□ -0.75
CUBNP3-201ENST00000457461 ANP32EQ9BTT0 268 aa10.36□□□□□ -0.75
CUBNP3-201ENST00000457461 RAPGEF2Q9Y4G8 1499 aa10.36□□□□□ -0.75
CUBNP3-201ENST00000457461 IGF1RP08069 1367 aa10.35□□□□□ -0.75
CUBNP3-201ENST00000457461 CUL7Q14999 1698 aa10.35□□□□□ -0.75
CUBNP3-201ENST00000457461 IFT140Q96RY7 1462 aa10.33□□□□□ -0.76
CUBNP3-201ENST00000457461 PBRM1Q86U86 1689 aa10.32□□□□□ -0.76
CUBNP3-201ENST00000457461 GAPVD1Q14C86 1478 aa10.31□□□□□ -0.76
CUBNP3-201ENST00000457461 CEP162Q5TB80 1403 aa10.3□□□□□ -0.76
CUBNP3-201ENST00000457461 UBE2Q2Q8WVN8 375 aa10.29□□□□□ -0.76
CUBNP3-201ENST00000457461 CARMIL1Q5VZK9 1371 aa10.28□□□□□ -0.76
CUBNP3-201ENST00000457461 NCBP3Q53F19 620 aaKnown RBP10.27□□□□□ -0.77
CUBNP3-201ENST00000457461 TDRD9Q8NDG6 1382 aaKnown RBP10.26□□□□□ -0.77
CUBNP3-201ENST00000457461 EIF4G3O43432 1585 aaKnown RBP10.26□□□□□ -0.77
CUBNP3-201ENST00000457461 ADAMTS12P58397 1594 aa10.25□□□□□ -0.77
CUBNP3-201ENST00000457461 ZNF608Q9ULD9 1512 aaPredicted RBP10.25□□□□□ -0.77
CUBNP3-201ENST00000457461 MSH5O43196 834 aa10.25□□□□□ -0.77
CUBNP3-201ENST00000457461 PPARGC1BQ86YN6 1023 aaKnown RBP10.25□□□□□ -0.77
CUBNP3-201ENST00000457461 GRIN2BQ13224 1484 aa10.25□□□□□ -0.77
CUBNP3-201ENST00000457461 UBTFP17480 764 aaKnown RBP10.24□□□□□ -0.77
CUBNP3-201ENST00000457461 CTTNBP2Q8WZ74 1663 aa10.24□□□□□ -0.77
CUBNP3-201ENST00000457461 AQRO60306 1485 aaKnown RBP eCLIP10.23□□□□□ -0.77
CUBNP3-201ENST00000457461 CLIP1P30622 1438 aa10.21□□□□□ -0.77
CUBNP3-201ENST00000457461 FHAD1B1AJZ9 1412 aa10.21□□□□□ -0.78
CUBNP3-201ENST00000457461 SLC4A1APQ9BWU0 796 aaKnown RBP10.2□□□□□ -0.78
CUBNP3-201ENST00000457461 NPM3O75607 178 aaKnown RBP10.19□□□□□ -0.78
CUBNP3-201ENST00000457461 MAGI1Q96QZ7 1491 aaPredicted RBP10.18□□□□□ -0.78
CUBNP3-201ENST00000457461 SNAPC4Q5SXM2 1469 aa10.16□□□□□ -0.78
CUBNP3-201ENST00000457461 ARAP1Q96P48 1450 aa10.16□□□□□ -0.78
CUBNP3-201ENST00000457461 ARHGAP35Q9NRY4 1499 aa10.16□□□□□ -0.78
CUBNP3-201ENST00000457461 GTF3C3Q9Y5Q9 886 aa10.16□□□□□ -0.78
CUBNP3-201ENST00000457461 VPS8Q8N3P4 1428 aa10.15□□□□□ -0.78
CUBNP3-201ENST00000457461 EFCAB5A4FU69 1503 aa10.14□□□□□ -0.79
CUBNP3-201ENST00000457461 SAMD9Q5K651 1589 aa10.13□□□□□ -0.79
CUBNP3-201ENST00000457461 MYT1LQ9UL68 1186 aa10.13□□□□□ -0.79
CUBNP3-201ENST00000457461 SYNJ2O15056 1496 aa10.13□□□□□ -0.79
CUBNP3-201ENST00000457461 GRIN2AQ12879 1464 aa10.13□□□□□ -0.79
CUBNP3-201ENST00000457461 CLSPNQ9HAW4 1339 aa10.11□□□□□ -0.79
CUBNP3-201ENST00000457461 NEUROD1Q13562 356 aa10.11□□□□□ -0.79
CUBNP3-201ENST00000457461 CNKSR2Q8WXI2 1034 aa10.11□□□□□ -0.79
CUBNP3-201ENST00000457461 IQGAP2Q13576 1575 aa10.11□□□□□ -0.79
CUBNP3-201ENST00000457461 MAPK8IP2Q13387 824 aaPredicted RBP10.1□□□□□ -0.79
CUBNP3-201ENST00000457461 ERICH6BQ5W0A0 696 aa10.09□□□□□ -0.79
CUBNP3-201ENST00000457461 NUP160Q12769 1436 aa10.08□□□□□ -0.8
CUBNP3-201ENST00000457461 KIAA0586Q9BVV6 1533 aa10.08□□□□□ -0.8
CUBNP3-201ENST00000457461 UGGT2Q9NYU1 1516 aa10.08□□□□□ -0.8
CUBNP3-201ENST00000457461 CEP170Q5SW79 1584 aa10.08□□□□□ -0.8
CUBNP3-201ENST00000457461 ARXQ96QS3 562 aa10.06□□□□□ -0.8
CUBNP3-201ENST00000457461 CHD1O14646 1710 aa10.06□□□□□ -0.8
CUBNP3-201ENST00000457461 PCGF6Q9BYE7 350 aa10.04□□□□□ -0.8
CUBNP3-201ENST00000457461 MAP3K1Q13233 1512 aa10.03□□□□□ -0.8
CUBNP3-201ENST00000457461 PCF11O94913 1555 aaKnown RBP10.02□□□□□ -0.8
CUBNP3-201ENST00000457461 FHOD3Q2V2M9 1422 aa10.02□□□□□ -0.81
CUBNP3-201ENST00000457461 KIAA0556O60303 1618 aa10.02□□□□□ -0.81
CUBNP3-201ENST00000457461 CFAP43Q8NDM7 1665 aa10.01□□□□□ -0.81
CUBNP3-201ENST00000457461 FYCO1Q9BQS8 1478 aa10.01□□□□□ -0.81
CUBNP3-201ENST00000457461 RANGAP1P46060 587 aaPredicted RBP10.01□□□□□ -0.81
CUBNP3-201ENST00000457461 DISP1Q96F81 1524 aa10.01□□□□□ -0.81
CUBNP3-201ENST00000457461 FMN1Q68DA7 1419 aa10□□□□□ -0.81
CUBNP3-201ENST00000457461 CHMP7Q8WUX9 453 aaPredicted RBP10□□□□□ -0.81
CUBNP3-201ENST00000457461 CASKIN1Q8WXD9 1431 aa9.99□□□□□ -0.81
CUBNP3-201ENST00000457461 TRIM26Q12899 539 aaPredicted RBP9.99□□□□□ -0.81
CUBNP3-201ENST00000457461 TIAM1Q13009 1591 aa9.99□□□□□ -0.81
CUBNP3-201ENST00000457461 SHROOM2Q13796 1616 aa9.99□□□□□ -0.81
CUBNP3-201ENST00000457461 LRRIQ1Q96JM4 1722 aa9.98□□□□□ -0.81
CUBNP3-201ENST00000457461 CLASP1Q7Z460 1538 aa9.96□□□□□ -0.82
CUBNP3-201ENST00000457461 PODXL2Q9NZ53 605 aa9.95□□□□□ -0.82
CUBNP3-201ENST00000457461 HECW1Q76N89 1606 aa9.94□□□□□ -0.82
CUBNP3-201ENST00000457461 P3H3Q8IVL6 736 aa9.93□□□□□ -0.82
CUBNP3-201ENST00000457461 FBLN2P98095 1184 aa9.92□□□□□ -0.82
CUBNP3-201ENST00000457461 LRRC9Q6ZRR7 1453 aa9.92□□□□□ -0.82
CUBNP3-201ENST00000457461 PKNOX2Q96KN3 472 aa9.91□□□□□ -0.82
CUBNP3-201ENST00000457461 CARMIL2Q6F5E8 1435 aa9.91□□□□□ -0.82
CUBNP3-201ENST00000457461 JPH4Q96JJ6 628 aa9.91□□□□□ -0.82
CUBNP3-201ENST00000457461 CCDC18Q5T9S5 1454 aa9.9□□□□□ -0.82
CUBNP3-201ENST00000457461 RAPGEF6Q8TEU7 1601 aa9.9□□□□□ -0.82
CUBNP3-201ENST00000457461 KANK4Q5T7N3 995 aaPredicted RBP9.89□□□□□ -0.83
CUBNP3-201ENST00000457461 ANO8Q9HCE9 1232 aaPredicted RBP9.88□□□□□ -0.83
CUBNP3-201ENST00000457461 ABCA8O94911 1581 aa9.88□□□□□ -0.83
CUBNP3-201ENST00000457461 EPRSP07814 1512 aaKnown RBP9.87□□□□□ -0.83
CUBNP3-201ENST00000457461 NUP153P49790 1475 aaKnown RBP9.87□□□□□ -0.83
CUBNP3-201ENST00000457461 PRG4Q92954 1404 aaPredicted RBP9.87□□□□□ -0.83
CUBNP3-201ENST00000457461 PLEKHG5O94827 1062 aa9.86□□□□□ -0.83
CUBNP3-201ENST00000457461 EHBP1L1Q8N3D4 1523 aa9.86□□□□□ -0.83
CUBNP3-201ENST00000457461 RRBP1Q9P2E9 1410 aaKnown RBP9.86□□□□□ -0.83
CUBNP3-201ENST00000457461 ZBTB22O15209 634 aa9.86□□□□□ -0.83
CUBNP3-201ENST00000457461 ARHGEF11O15085 1522 aa9.85□□□□□ -0.83
CUBNP3-201ENST00000457461 MAGI3Q5TCQ9 1506 aa9.85□□□□□ -0.83
CUBNP3-201ENST00000457461 NEFLP07196 543 aa9.85□□□□□ -0.83
CUBNP3-201ENST00000457461 ERCC6L2Q5T890 1561 aa9.84□□□□□ -0.83
CUBNP3-201ENST00000457461 SUPT6HQ7KZ85 1726 aaKnown RBP9.84□□□□□ -0.83
CUBNP3-201ENST00000457461 PLB1Q6P1J6 1458 aa9.84□□□□□ -0.83
CUBNP3-201ENST00000457461 CDK13Q14004 1512 aaKnown RBP9.83□□□□□ -0.84
CUBNP3-201ENST00000457461 RNF216Q9NWF9 866 aaPredicted RBP9.83□□□□□ -0.84
CUBNP3-201ENST00000457461 ADCY10Q96PN6 1610 aa9.81□□□□□ -0.84
CUBNP3-201ENST00000457461 PHLDB1Q86UU1 1377 aa9.8□□□□□ -0.84
CUBNP3-201ENST00000457461 PTPRGP23470 1445 aa9.79□□□□□ -0.84
CUBNP3-201ENST00000457461 NCOA2Q15596 1464 aa9.79□□□□□ -0.84
CUBNP3-201ENST00000457461 MTUS2Q5JR59 1369 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms