RNA–Protein interactions for RNA: ENST00000457458.6

CDK16-204, Transcript of cyclin dependent kinase 16, humanhuman

TSL 1 (best) BASIC

Gene CDK16, Length 3,158 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK16-204ENST00000457458 ADAMTS12P58397 1594 aa19.09■□□□□ 0.65
CDK16-204ENST00000457458 MRC2Q9UBG0 1479 aa19.09■□□□□ 0.65
CDK16-204ENST00000457458 ARHGAP35Q9NRY4 1499 aa19.08■□□□□ 0.64
CDK16-204ENST00000457458 TIAM1Q13009 1591 aa19.05■□□□□ 0.64
CDK16-204ENST00000457458 GAPVD1Q14C86 1478 aa19.05■□□□□ 0.64
CDK16-204ENST00000457458 ZEB1P37275 1124 aaPredicted RBP19.03■□□□□ 0.64
CDK16-204ENST00000457458 ZNF608Q9ULD9 1512 aaPredicted RBP19.03■□□□□ 0.64
CDK16-204ENST00000457458 RRBP1Q9P2E9 1410 aaKnown RBP19.03■□□□□ 0.64
CDK16-204ENST00000457458 FYCO1Q9BQS8 1478 aa19.01■□□□□ 0.63
CDK16-204ENST00000457458 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.99■□□□□ 0.63
CDK16-204ENST00000457458 LRRIQ1Q96JM4 1722 aa18.99■□□□□ 0.63
CDK16-204ENST00000457458 APLP2Q06481 763 aa18.98■□□□□ 0.63
CDK16-204ENST00000457458 ATP1B4Q9UN42 357 aaPredicted RBP18.97■□□□□ 0.63
CDK16-204ENST00000457458 KANK4Q5T7N3 995 aaPredicted RBP18.95■□□□□ 0.62
CDK16-204ENST00000457458 ARHGEF11O15085 1522 aa18.94■□□□□ 0.62
CDK16-204ENST00000457458 IFT140Q96RY7 1462 aa18.94■□□□□ 0.62
CDK16-204ENST00000457458 UGGT2Q9NYU1 1516 aa18.94■□□□□ 0.62
CDK16-204ENST00000457458 SNAPC4Q5SXM2 1469 aa18.92■□□□□ 0.62
CDK16-204ENST00000457458 FHAD1B1AJZ9 1412 aa18.9■□□□□ 0.62
CDK16-204ENST00000457458 FBLN2P98095 1184 aa18.89■□□□□ 0.61
CDK16-204ENST00000457458 PCF11O94913 1555 aaKnown RBP18.89■□□□□ 0.61
CDK16-204ENST00000457458 FHOD3Q2V2M9 1422 aa18.88■□□□□ 0.61
CDK16-204ENST00000457458 CASKIN1Q8WXD9 1431 aa18.87■□□□□ 0.61
CDK16-204ENST00000457458 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.87■□□□□ 0.61
CDK16-204ENST00000457458 HNRNPUL2Q1KMD3 747 aaKnown RBP18.85■□□□□ 0.61
CDK16-204ENST00000457458 ADCY10Q96PN6 1610 aa18.82■□□□□ 0.6
CDK16-204ENST00000457458 GRIN2BQ13224 1484 aa18.82■□□□□ 0.6
CDK16-204ENST00000457458 EIF4G3O43432 1585 aaKnown RBP18.8■□□□□ 0.6
CDK16-204ENST00000457458 CLSPNQ9HAW4 1339 aa18.8■□□□□ 0.6
CDK16-204ENST00000457458 IQGAP2Q13576 1575 aa18.79■□□□□ 0.6
CDK16-204ENST00000457458 ARID3CA6NKF2 412 aa18.78■□□□□ 0.6
CDK16-204ENST00000457458 MAGI1Q96QZ7 1491 aaPredicted RBP18.78■□□□□ 0.6
CDK16-204ENST00000457458 LRRC9Q6ZRR7 1453 aa18.76■□□□□ 0.59
CDK16-204ENST00000457458 HECW1Q76N89 1606 aa18.76■□□□□ 0.59
CDK16-204ENST00000457458 CCDC18Q5T9S5 1454 aa18.74■□□□□ 0.59
CDK16-204ENST00000457458 CHMP7Q8WUX9 453 aaPredicted RBP18.74■□□□□ 0.59
CDK16-204ENST00000457458 FMN1Q68DA7 1419 aa18.73■□□□□ 0.59
CDK16-204ENST00000457458 EHBP1L1Q8N3D4 1523 aa18.73■□□□□ 0.59
CDK16-204ENST00000457458 GCC2Q8IWJ2 1684 aa18.7■□□□□ 0.58
CDK16-204ENST00000457458 SHROOM2Q13796 1616 aa18.7■□□□□ 0.58
CDK16-204ENST00000457458 ITGAEP38570 1179 aa18.7■□□□□ 0.58
CDK16-204ENST00000457458 SUPT6HQ7KZ85 1726 aaKnown RBP18.7■□□□□ 0.58
CDK16-204ENST00000457458 KIAA0556O60303 1618 aa18.69■□□□□ 0.58
CDK16-204ENST00000457458 TCOF1Q13428 1488 aaKnown RBP18.69■□□□□ 0.58
CDK16-204ENST00000457458 CCER1Q8TC90 406 aaPredicted RBP18.68■□□□□ 0.58
CDK16-204ENST00000457458 AKNAQ7Z591 1439 aa18.66■□□□□ 0.58
CDK16-204ENST00000457458 KIAA0586Q9BVV6 1533 aa18.63■□□□□ 0.57
CDK16-204ENST00000457458 GRIN2AQ12879 1464 aa18.62■□□□□ 0.57
CDK16-204ENST00000457458 NUP160Q12769 1436 aa18.61■□□□□ 0.57
CDK16-204ENST00000457458 CROCC2H7BZ55 1655 aa18.56■□□□□ 0.56
CDK16-204ENST00000457458 PHLDB1Q86UU1 1377 aa18.55■□□□□ 0.56
CDK16-204ENST00000457458 SYNJ2O15056 1496 aa18.55■□□□□ 0.56
CDK16-204ENST00000457458 DISP1Q96F81 1524 aa18.54■□□□□ 0.56
CDK16-204ENST00000457458 CEP170Q5SW79 1584 aa18.54■□□□□ 0.56
CDK16-204ENST00000457458 RAPGEF6Q8TEU7 1601 aa18.54■□□□□ 0.56
CDK16-204ENST00000457458 ITSN2Q9NZM3 1697 aa18.53■□□□□ 0.56
CDK16-204ENST00000457458 FAM50AQ14320 339 aaKnown RBP18.53■□□□□ 0.56
CDK16-204ENST00000457458 JPH4Q96JJ6 628 aa18.51■□□□□ 0.55
CDK16-204ENST00000457458 CCNB3Q8WWL7 1395 aa18.48■□□□□ 0.55
CDK16-204ENST00000457458 ADGBQ8N7X0 1667 aa18.48■□□□□ 0.55
CDK16-204ENST00000457458 ABCA8O94911 1581 aa18.48■□□□□ 0.55
CDK16-204ENST00000457458 ACIN1Q9UKV3 1341 aaKnown RBP18.47■□□□□ 0.55
CDK16-204ENST00000457458 MTUS2Q5JR59 1369 aa18.47■□□□□ 0.55
CDK16-204ENST00000457458 MIA2Q96PC5 1412 aa18.46■□□□□ 0.55
CDK16-204ENST00000457458 CDK13Q14004 1512 aaKnown RBP18.44■□□□□ 0.54
CDK16-204ENST00000457458 PTPN23Q9H3S7 1636 aa18.43■□□□□ 0.54
CDK16-204ENST00000457458 MAGI3Q5TCQ9 1506 aa18.43■□□□□ 0.54
CDK16-204ENST00000457458 DNMT1P26358 1616 aaKnown RBP18.42■□□□□ 0.54
CDK16-204ENST00000457458 MAPKBP1O60336 1514 aa18.4■□□□□ 0.54
CDK16-204ENST00000457458 EPRSP07814 1512 aaKnown RBP18.39■□□□□ 0.53
CDK16-204ENST00000457458 PLB1Q6P1J6 1458 aa18.38■□□□□ 0.53
CDK16-204ENST00000457458 FGD6Q6ZV73 1430 aa18.35■□□□□ 0.53
CDK16-204ENST00000457458 MYOM3Q5VTT5 1437 aa18.35■□□□□ 0.53
CDK16-204ENST00000457458 CLASP1Q7Z460 1538 aa18.34■□□□□ 0.53
CDK16-204ENST00000457458 CHD1O14646 1710 aa18.34■□□□□ 0.53
CDK16-204ENST00000457458 DHX57Q6P158 1386 aaKnown RBP18.34■□□□□ 0.53
CDK16-204ENST00000457458 HFM1A2PYH4 1435 aa18.33■□□□□ 0.53
CDK16-204ENST00000457458 NCOA2Q15596 1464 aa18.32■□□□□ 0.52
CDK16-204ENST00000457458 PRG4Q92954 1404 aaPredicted RBP18.32■□□□□ 0.52
CDK16-204ENST00000457458 NUP153P49790 1475 aaKnown RBP18.31■□□□□ 0.52
CDK16-204ENST00000457458 MAST1Q9Y2H9 1570 aa18.31■□□□□ 0.52
CDK16-204ENST00000457458 ADGRL2O95490 1459 aa18.3■□□□□ 0.52
CDK16-204ENST00000457458 ARHGEF5Q12774 1597 aa18.3■□□□□ 0.52
CDK16-204ENST00000457458 POLR1AO95602 1720 aaPredicted RBP18.29■□□□□ 0.52
CDK16-204ENST00000457458 SHANK2Q9UPX8 1470 aa18.28■□□□□ 0.52
CDK16-204ENST00000457458 CARMIL2Q6F5E8 1435 aa18.28■□□□□ 0.52
CDK16-204ENST00000457458 CDC42BPAQ5VT25 1732 aa18.28■□□□□ 0.52
CDK16-204ENST00000457458 KDM5DQ9BY66 1539 aa18.27■□□□□ 0.52
CDK16-204ENST00000457458 CHIC2Q9UKJ5 165 aa18.27■□□□□ 0.52
CDK16-204ENST00000457458 ROCK1Q13464 1354 aa18.26■□□□□ 0.51
CDK16-204ENST00000457458 TIMELESSQ9UNS1 1208 aa18.26■□□□□ 0.51
CDK16-204ENST00000457458 ERCC6L2Q5T890 1561 aa18.25■□□□□ 0.51
CDK16-204ENST00000457458 ARAP3Q8WWN8 1544 aa18.25■□□□□ 0.51
CDK16-204ENST00000457458 RAB3GAP2Q9H2M9 1393 aa18.25■□□□□ 0.51
CDK16-204ENST00000457458 ZNF644Q9H582 1327 aaPredicted RBP18.24■□□□□ 0.51
CDK16-204ENST00000457458 PTPRKQ15262 1439 aa18.23■□□□□ 0.51
CDK16-204ENST00000457458 UHRF1BP1LA0JNW5 1464 aa18.23■□□□□ 0.51
CDK16-204ENST00000457458 SETD5Q9C0A6 1442 aa18.23■□□□□ 0.51
CDK16-204ENST00000457458 PREX2Q70Z35 1606 aa18.22■□□□□ 0.51
CDK16-204ENST00000457458 KDM5BQ9UGL1 1544 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms