RNA–Protein interactions for RNA: ENST00000457109.5

PKP4-207, Transcript of plakophilin 4, humanhuman

TSL 3

Gene PKP4, Length 520 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-207ENST00000457109 ERCC6L2Q5T890 1561 aa15.19■□□□□ 0.02
PKP4-207ENST00000457109 FAM69CQ0P6D2 419 aa15.14■□□□□ 0.01
PKP4-207ENST00000457109 TTBK1Q5TCY1 1321 aaPredicted RBP15.14■□□□□ 0.01
PKP4-207ENST00000457109 SHROOM2Q13796 1616 aa15.14■□□□□ 0.01
PKP4-207ENST00000457109 CARMIL1Q5VZK9 1371 aa15.13■□□□□ 0.01
PKP4-207ENST00000457109 KIAA0586Q9BVV6 1533 aa15.12■□□□□ 0.01
PKP4-207ENST00000457109 CARMIL2Q6F5E8 1435 aa15.08■□□□□ 0
PKP4-207ENST00000457109 PTPRGP23470 1445 aa15.07■□□□□ 0
PKP4-207ENST00000457109 RUSC2Q8N2Y8 1516 aa15.05■□□□□ -0
PKP4-207ENST00000457109 CUL7Q14999 1698 aa15.05■□□□□ -0
PKP4-207ENST00000457109 TNIKQ9UKE5 1360 aa15.01□□□□□ -0.01
PKP4-207ENST00000457109 FAM9AQ8IZU1 332 aaPredicted RBP15□□□□□ -0.01
PKP4-207ENST00000457109 ABCC10Q5T3U5 1492 aa15□□□□□ -0.01
PKP4-207ENST00000457109 MAPKBP1O60336 1514 aa14.96□□□□□ -0.02
PKP4-207ENST00000457109 RAPGEF2Q9Y4G8 1499 aa14.95□□□□□ -0.02
PKP4-207ENST00000457109 ADCY10Q96PN6 1610 aa14.92□□□□□ -0.02
PKP4-207ENST00000457109 IQGAP2Q13576 1575 aa14.91□□□□□ -0.02
PKP4-207ENST00000457109 UACAQ9BZF9 1416 aa14.91□□□□□ -0.02
PKP4-207ENST00000457109 ABCC2Q92887 1545 aa14.89□□□□□ -0.03
PKP4-207ENST00000457109 PLB1Q6P1J6 1458 aa14.89□□□□□ -0.03
PKP4-207ENST00000457109 ASXL2Q76L83 1435 aa14.86□□□□□ -0.03
PKP4-207ENST00000457109 KIF13AQ9H1H9 1805 aa14.86□□□□□ -0.03
PKP4-207ENST00000457109 DIP2BQ9P265 1576 aa14.85□□□□□ -0.03
PKP4-207ENST00000457109 UHRF1BP1LA0JNW5 1464 aa14.85□□□□□ -0.03
PKP4-207ENST00000457109 DISP1Q96F81 1524 aa14.83□□□□□ -0.04
PKP4-207ENST00000457109 UGGT2Q9NYU1 1516 aa14.82□□□□□ -0.04
PKP4-207ENST00000457109 GOLGA3Q08378 1498 aa14.82□□□□□ -0.04
PKP4-207ENST00000457109 CSRNP3Q8WYN3 585 aa14.8□□□□□ -0.04
PKP4-207ENST00000457109 KCNH8Q96L42 1107 aa14.8□□□□□ -0.04
PKP4-207ENST00000457109 KDM6BO15054 1643 aa14.8□□□□□ -0.04
PKP4-207ENST00000457109 KDM5BQ9UGL1 1544 aa14.76□□□□□ -0.05
PKP4-207ENST00000457109 P3H3Q8IVL6 736 aa14.76□□□□□ -0.05
PKP4-207ENST00000457109 KIAA0556O60303 1618 aa14.74□□□□□ -0.05
PKP4-207ENST00000457109 GLI2P10070 1586 aa14.74□□□□□ -0.05
PKP4-207ENST00000457109 EPRSP07814 1512 aaKnown RBP14.74□□□□□ -0.05
PKP4-207ENST00000457109 TEX14Q8IWB6 1497 aa14.74□□□□□ -0.05
PKP4-207ENST00000457109 PRXQ9BXM0 1461 aa14.74□□□□□ -0.05
PKP4-207ENST00000457109 TSPOAP1O95153 1857 aa14.74□□□□□ -0.05
PKP4-207ENST00000457109 KDM4FA0A1W2PPD8 638 aa14.73□□□□□ -0.05
PKP4-207ENST00000457109 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.73□□□□□ -0.05
PKP4-207ENST00000457109 HNRNPUL2Q1KMD3 747 aaKnown RBP14.73□□□□□ -0.05
PKP4-207ENST00000457109 ARID3CA6NKF2 412 aa14.71□□□□□ -0.05
PKP4-207ENST00000457109 RANGAP1P46060 587 aaPredicted RBP14.71□□□□□ -0.05
PKP4-207ENST00000457109 WDR7Q9Y4E6 1490 aa14.69□□□□□ -0.06
PKP4-207ENST00000457109 CD109Q6YHK3 1445 aa14.68□□□□□ -0.06
PKP4-207ENST00000457109 ZCCHC11Q5TAX3 1644 aaKnown RBP14.66□□□□□ -0.06
PKP4-207ENST00000457109 EEA1Q15075 1411 aa14.66□□□□□ -0.06
PKP4-207ENST00000457109 CTTNBP2Q8WZ74 1663 aa14.64□□□□□ -0.07
PKP4-207ENST00000457109 ABCA8O94911 1581 aa14.61□□□□□ -0.07
PKP4-207ENST00000457109 PLEKHD1A6NEE1 506 aa14.6□□□□□ -0.07
PKP4-207ENST00000457109 COL17A1Q9UMD9 1497 aaPredicted RBP14.6□□□□□ -0.07
PKP4-207ENST00000457109 MAP3K4Q9Y6R4 1608 aa14.59□□□□□ -0.07
PKP4-207ENST00000457109 MAGI3Q5TCQ9 1506 aa14.59□□□□□ -0.07
PKP4-207ENST00000457109 ATP10BO94823 1461 aa14.58□□□□□ -0.08
PKP4-207ENST00000457109 UBTFP17480 764 aaKnown RBP14.58□□□□□ -0.08
PKP4-207ENST00000457109 PHLDB1Q86UU1 1377 aa14.57□□□□□ -0.08
PKP4-207ENST00000457109 PPRC1Q5VV67 1664 aaKnown RBP14.56□□□□□ -0.08
PKP4-207ENST00000457109 EHMT2Q96KQ7 1210 aa14.56□□□□□ -0.08
PKP4-207ENST00000457109 ADGRL1O94910 1474 aa14.56□□□□□ -0.08
PKP4-207ENST00000457109 ATP1B4Q9UN42 357 aaPredicted RBP14.55□□□□□ -0.08
PKP4-207ENST00000457109 CFAP43Q8NDM7 1665 aa14.52□□□□□ -0.09
PKP4-207ENST00000457109 ARID4BQ4LE39 1312 aaPredicted RBP14.5□□□□□ -0.09
PKP4-207ENST00000457109 FHOD3Q2V2M9 1422 aa14.49□□□□□ -0.09
PKP4-207ENST00000457109 RAPGEF3O95398 923 aa14.49□□□□□ -0.09
PKP4-207ENST00000457109 CDK11AQ9UQ88 783 aaPredicted RBP14.48□□□□□ -0.09
PKP4-207ENST00000457109 ARAP3Q8WWN8 1544 aa14.47□□□□□ -0.09
PKP4-207ENST00000457109 CHIC1Q5VXU3 224 aa14.47□□□□□ -0.09
PKP4-207ENST00000457109 RAPGEF6Q8TEU7 1601 aa14.47□□□□□ -0.09
PKP4-207ENST00000457109 SAMD9Q5K651 1589 aa14.47□□□□□ -0.09
PKP4-207ENST00000457109 NEO1Q92859 1461 aa14.44□□□□□ -0.1
PKP4-207ENST00000457109 NUP153P49790 1475 aaKnown RBP14.44□□□□□ -0.1
PKP4-207ENST00000457109 EFCAB5A4FU69 1503 aa14.41□□□□□ -0.1
PKP4-207ENST00000457109 ABCA9Q8IUA7 1624 aa14.41□□□□□ -0.1
PKP4-207ENST00000457109 FMN1Q68DA7 1419 aa14.4□□□□□ -0.1
PKP4-207ENST00000457109 KIF21BO75037 1637 aa14.39□□□□□ -0.11
PKP4-207ENST00000457109 DENND4BO75064 1496 aaPredicted RBP14.38□□□□□ -0.11
PKP4-207ENST00000457109 AKNAQ7Z591 1439 aa14.38□□□□□ -0.11
PKP4-207ENST00000457109 EFCAB2Q5VUJ9 269 aa14.37□□□□□ -0.11
PKP4-207ENST00000457109 MYT1LQ9UL68 1186 aa14.36□□□□□ -0.11
PKP4-207ENST00000457109 FANCAO15360 1455 aa14.36□□□□□ -0.11
PKP4-207ENST00000457109 ILDR1Q86SU0 546 aaPredicted RBP14.34□□□□□ -0.11
PKP4-207ENST00000457109 POGZQ7Z3K3 1410 aa14.32□□□□□ -0.12
PKP4-207ENST00000457109 PLPPR3Q6T4P5 718 aa14.32□□□□□ -0.12
PKP4-207ENST00000457109 PLCH2O75038 1416 aa14.31□□□□□ -0.12
PKP4-207ENST00000457109 CLIP1P30622 1438 aa14.31□□□□□ -0.12
PKP4-207ENST00000457109 SCAPERQ9BY12 1400 aa14.31□□□□□ -0.12
PKP4-207ENST00000457109 HECW2Q9P2P5 1572 aa14.3□□□□□ -0.12
PKP4-207ENST00000457109 MLECQ14165 292 aa14.3□□□□□ -0.12
PKP4-207ENST00000457109 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.3□□□□□ -0.125e-10■■■■■ 31.4
PKP4-207ENST00000457109 PTPRMP28827 1452 aa14.29□□□□□ -0.12
PKP4-207ENST00000457109 CDK13Q14004 1512 aaKnown RBP14.29□□□□□ -0.12
PKP4-207ENST00000457109 CFAP74Q9C0B2 1584 aa14.28□□□□□ -0.12
PKP4-207ENST00000457109 ARHGAP35Q9NRY4 1499 aa14.28□□□□□ -0.12
PKP4-207ENST00000457109 MAGI2Q86UL8 1455 aa14.26□□□□□ -0.13
PKP4-207ENST00000457109 HECW1Q76N89 1606 aa14.26□□□□□ -0.13
PKP4-207ENST00000457109 TROQ12816 1431 aaPredicted RBP14.24□□□□□ -0.13
PKP4-207ENST00000457109 ESF1Q9H501 851 aaKnown RBP14.24□□□□□ -0.13
PKP4-207ENST00000457109 AFAP1Q8N556 730 aa14.23□□□□□ -0.13
PKP4-207ENST00000457109 ZFYVE16Q7Z3T8 1539 aa14.22□□□□□ -0.13
PKP4-207ENST00000457109 TTC37Q6PGP7 1564 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms