RNA–Protein interactions for RNA: ENST00000456923.5

FN1-213, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 3,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-213ENST00000456923 KIF21BO75037 1637 aa10.8□□□□□ -0.68
FN1-213ENST00000456923 KIF27Q86VH2 1401 aa10.8□□□□□ -0.68
FN1-213ENST00000456923 PRXQ9BXM0 1461 aa10.76□□□□□ -0.69
FN1-213ENST00000456923 UGGT2Q9NYU1 1516 aa10.76□□□□□ -0.69
FN1-213ENST00000456923 ARHGEF11O15085 1522 aa10.75□□□□□ -0.69
FN1-213ENST00000456923 KIAA0586Q9BVV6 1533 aa10.74□□□□□ -0.69
FN1-213ENST00000456923 IGF1RP08069 1367 aa10.73□□□□□ -0.69
FN1-213ENST00000456923 SUPT5HO00267 1087 aaKnown RBP10.72□□□□□ -0.69
FN1-213ENST00000456923 SAMD9Q5K651 1589 aa10.72□□□□□ -0.69
FN1-213ENST00000456923 IQGAP2Q13576 1575 aa10.7□□□□□ -0.7
FN1-213ENST00000456923 TDRD9Q8NDG6 1382 aaKnown RBP10.69□□□□□ -0.7
FN1-213ENST00000456923 UHRF1BP1LA0JNW5 1464 aa10.68□□□□□ -0.7
FN1-213ENST00000456923 RAPGEF2Q9Y4G8 1499 aa10.68□□□□□ -0.7
FN1-213ENST00000456923 OSCARQ8IYS5 282 aa10.67□□□□□ -0.7
FN1-213ENST00000456923 ARAP1Q96P48 1450 aa10.66□□□□□ -0.7
FN1-213ENST00000456923 PCGF6Q9BYE7 350 aa10.65□□□□□ -0.7
FN1-213ENST00000456923 KIAA0556O60303 1618 aa10.65□□□□□ -0.7
FN1-213ENST00000456923 MAPKBP1O60336 1514 aa10.64□□□□□ -0.71
FN1-213ENST00000456923 EFCAB5A4FU69 1503 aa10.63□□□□□ -0.71
FN1-213ENST00000456923 DISP1Q96F81 1524 aa10.6□□□□□ -0.71
FN1-213ENST00000456923 GLI2P10070 1586 aa10.6□□□□□ -0.71
FN1-213ENST00000456923 CARMIL1Q5VZK9 1371 aa10.59□□□□□ -0.71
FN1-213ENST00000456923 ABCA8O94911 1581 aa10.58□□□□□ -0.72
FN1-213ENST00000456923 ADCY10Q96PN6 1610 aa10.58□□□□□ -0.72
FN1-213ENST00000456923 GOLGA3Q08378 1498 aa10.58□□□□□ -0.72
FN1-213ENST00000456923 CENPBP07199 599 aaPredicted RBP10.58□□□□□ -0.72
FN1-213ENST00000456923 ERCC6L2Q5T890 1561 aa10.56□□□□□ -0.72
FN1-213ENST00000456923 KDM5BQ9UGL1 1544 aa10.56□□□□□ -0.72
FN1-213ENST00000456923 KIF13AQ9H1H9 1805 aa10.55□□□□□ -0.72
FN1-213ENST00000456923 GTF3C3Q9Y5Q9 886 aa10.53□□□□□ -0.72
FN1-213ENST00000456923 ABCC2Q92887 1545 aa10.53□□□□□ -0.72
FN1-213ENST00000456923 APLP2Q06481 763 aa10.51□□□□□ -0.73
FN1-213ENST00000456923 PLEKHG5O94827 1062 aa10.49□□□□□ -0.73
FN1-213ENST00000456923 MAP3K4Q9Y6R4 1608 aa10.49□□□□□ -0.73
FN1-213ENST00000456923 CHMP7Q8WUX9 453 aaPredicted RBP10.49□□□□□ -0.73
FN1-213ENST00000456923 PRG4Q92954 1404 aaPredicted RBP10.48□□□□□ -0.73
FN1-213ENST00000456923 ZCCHC11Q5TAX3 1644 aaKnown RBP10.48□□□□□ -0.73
FN1-213ENST00000456923 CARMIL2Q6F5E8 1435 aa10.47□□□□□ -0.73
FN1-213ENST00000456923 DIP2BQ9P265 1576 aa10.47□□□□□ -0.73
FN1-213ENST00000456923 CFAP43Q8NDM7 1665 aa10.47□□□□□ -0.73
FN1-213ENST00000456923 TNIKQ9UKE5 1360 aa10.47□□□□□ -0.73
FN1-213ENST00000456923 PPRC1Q5VV67 1664 aaKnown RBP10.47□□□□□ -0.73
FN1-213ENST00000456923 RAPGEF6Q8TEU7 1601 aa10.46□□□□□ -0.74
FN1-213ENST00000456923 EIF5BO60841 1220 aaKnown RBP10.46□□□□□ -0.74
FN1-213ENST00000456923 ARAP3Q8WWN8 1544 aa10.43□□□□□ -0.74
FN1-213ENST00000456923 ABCA9Q8IUA7 1624 aa10.41□□□□□ -0.74
FN1-213ENST00000456923 LRRIQ1Q96JM4 1722 aa10.41□□□□□ -0.74
FN1-213ENST00000456923 ABCC10Q5T3U5 1492 aa10.4□□□□□ -0.74
FN1-213ENST00000456923 UACAQ9BZF9 1416 aa10.39□□□□□ -0.75
FN1-213ENST00000456923 HECW1Q76N89 1606 aa10.39□□□□□ -0.75
FN1-213ENST00000456923 CHIC1Q5VXU3 224 aa10.39□□□□□ -0.75
FN1-213ENST00000456923 ANO8Q9HCE9 1232 aaPredicted RBP10.39□□□□□ -0.75
FN1-213ENST00000456923 PLB1Q6P1J6 1458 aa10.39□□□□□ -0.75
FN1-213ENST00000456923 JPH4Q96JJ6 628 aa10.38□□□□□ -0.75
FN1-213ENST00000456923 CSRNP3Q8WYN3 585 aa10.38□□□□□ -0.75
FN1-213ENST00000456923 CFAP74Q9C0B2 1584 aa10.38□□□□□ -0.75
FN1-213ENST00000456923 MAP3K1Q13233 1512 aa10.37□□□□□ -0.75
FN1-213ENST00000456923 TRIM41Q8WV44 630 aa10.37□□□□□ -0.75
FN1-213ENST00000456923 CCDC136Q96JN2 1154 aa10.37□□□□□ -0.75
FN1-213ENST00000456923 NEUROD1Q13562 356 aa10.36□□□□□ -0.75
FN1-213ENST00000456923 MAGI3Q5TCQ9 1506 aa10.35□□□□□ -0.75
FN1-213ENST00000456923 ARHGAP35Q9NRY4 1499 aa10.33□□□□□ -0.76
FN1-213ENST00000456923 FYCO1Q9BQS8 1478 aa10.33□□□□□ -0.76
FN1-213ENST00000456923 PTPRGP23470 1445 aa10.32□□□□□ -0.76
FN1-213ENST00000456923 CCDC18Q5T9S5 1454 aa10.31□□□□□ -0.76
FN1-213ENST00000456923 NUP153P49790 1475 aaKnown RBP10.31□□□□□ -0.76
FN1-213ENST00000456923 EPRSP07814 1512 aaKnown RBP10.31□□□□□ -0.76
FN1-213ENST00000456923 WDR7Q9Y4E6 1490 aa10.31□□□□□ -0.76
FN1-213ENST00000456923 FMN1Q68DA7 1419 aa10.3□□□□□ -0.76
FN1-213ENST00000456923 ACIN1Q9UKV3 1341 aaKnown RBP10.3□□□□□ -0.76
FN1-213ENST00000456923 YTHDC1Q96MU7 727 aaKnown RBP10.3□□□□□ -0.76
FN1-213ENST00000456923 CASKIN1Q8WXD9 1431 aa10.28□□□□□ -0.76
FN1-213ENST00000456923 PHLDB1Q86UU1 1377 aa10.28□□□□□ -0.76
FN1-213ENST00000456923 ZMYM4Q5VZL5 1548 aa10.27□□□□□ -0.77
FN1-213ENST00000456923 ATP10BO94823 1461 aa10.26□□□□□ -0.77
FN1-213ENST00000456923 PCF11O94913 1555 aaKnown RBP10.26□□□□□ -0.77
FN1-213ENST00000456923 REREQ9P2R6 1566 aa10.25□□□□□ -0.77
FN1-213ENST00000456923 MYO5CQ9NQX4 1742 aa10.25□□□□□ -0.77
FN1-213ENST00000456923 PREX2Q70Z35 1606 aa10.25□□□□□ -0.77
FN1-213ENST00000456923 TEX14Q8IWB6 1497 aa10.24□□□□□ -0.77
FN1-213ENST00000456923 ANP32EQ9BTT0 268 aa10.24□□□□□ -0.77
FN1-213ENST00000456923 BCORL1Q5H9F3 1711 aa10.24□□□□□ -0.77
FN1-213ENST00000456923 ASXL2Q76L83 1435 aa10.24□□□□□ -0.77
FN1-213ENST00000456923 NEO1Q92859 1461 aa10.24□□□□□ -0.77
FN1-213ENST00000456923 RICTORQ6R327 1708 aa10.23□□□□□ -0.77
FN1-213ENST00000456923 FBLN2P98095 1184 aa10.21□□□□□ -0.77
FN1-213ENST00000456923 ITSN2Q9NZM3 1697 aa10.21□□□□□ -0.77
FN1-213ENST00000456923 KIF14Q15058 1648 aa10.21□□□□□ -0.77
FN1-213ENST00000456923 FRMPD1Q5SYB0 1578 aa10.21□□□□□ -0.77
FN1-213ENST00000456923 CDC42BPAQ5VT25 1732 aa10.2□□□□□ -0.78
FN1-213ENST00000456923 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.19□□□□□ -0.78
FN1-213ENST00000456923 CDC42BPBQ9Y5S2 1711 aa10.19□□□□□ -0.78
FN1-213ENST00000456923 EHBP1L1Q8N3D4 1523 aa10.19□□□□□ -0.78
FN1-213ENST00000456923 KDM5CP41229 1560 aa10.19□□□□□ -0.78
FN1-213ENST00000456923 PODXL2Q9NZ53 605 aa10.18□□□□□ -0.78
FN1-213ENST00000456923 AEBP2Q6ZN18 517 aaPredicted RBP10.18□□□□□ -0.78
FN1-213ENST00000456923 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.18□□□□□ -0.78
FN1-213ENST00000456923 TTC37Q6PGP7 1564 aa10.17□□□□□ -0.78
FN1-213ENST00000456923 FAM135AQ9P2D6 1515 aa10.16□□□□□ -0.78
FN1-213ENST00000456923 TIAM1Q13009 1591 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms