RNA–Protein interactions for RNA: ENST00000456079.1

PLOD3-207, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 4

Gene PLOD3, Length 563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-207ENST00000456079 SHROOM2Q13796 1616 aa25.15■■□□□ 1.62
PLOD3-207ENST00000456079 JPH4Q96JJ6 628 aa25.12■■□□□ 1.61
PLOD3-207ENST00000456079 RAPGEF2Q9Y4G8 1499 aa25.12■■□□□ 1.61
PLOD3-207ENST00000456079 KIAA0586Q9BVV6 1533 aa25.11■■□□□ 1.61
PLOD3-207ENST00000456079 PRXQ9BXM0 1461 aa25.09■■□□□ 1.61
PLOD3-207ENST00000456079 PRG4Q92954 1404 aaPredicted RBP25.07■■□□□ 1.6
PLOD3-207ENST00000456079 FAM9AQ8IZU1 332 aaPredicted RBP25.05■■□□□ 1.6
PLOD3-207ENST00000456079 CSRNP3Q8WYN3 585 aa25.05■■□□□ 1.6
PLOD3-207ENST00000456079 EEA1Q15075 1411 aa24.95■■□□□ 1.59
PLOD3-207ENST00000456079 IQGAP2Q13576 1575 aa24.93■■□□□ 1.58
PLOD3-207ENST00000456079 DISP1Q96F81 1524 aa24.87■■□□□ 1.57
PLOD3-207ENST00000456079 UGGT2Q9NYU1 1516 aa24.84■■□□□ 1.57
PLOD3-207ENST00000456079 CTTNBP2Q8WZ74 1663 aa24.81■■□□□ 1.56
PLOD3-207ENST00000456079 EHMT2Q96KQ7 1210 aa24.77■■□□□ 1.56
PLOD3-207ENST00000456079 TTBK1Q5TCY1 1321 aaPredicted RBP24.77■■□□□ 1.56
PLOD3-207ENST00000456079 CARMIL2Q6F5E8 1435 aa24.76■■□□□ 1.55
PLOD3-207ENST00000456079 KIF21BO75037 1637 aa24.75■■□□□ 1.55
PLOD3-207ENST00000456079 TNIKQ9UKE5 1360 aa24.75■■□□□ 1.55
PLOD3-207ENST00000456079 PTPRGP23470 1445 aa24.75■■□□□ 1.55
PLOD3-207ENST00000456079 KIAA0556O60303 1618 aa24.73■■□□□ 1.55
PLOD3-207ENST00000456079 ADCY10Q96PN6 1610 aa24.7■■□□□ 1.54
PLOD3-207ENST00000456079 P3H3Q8IVL6 736 aa24.64■■□□□ 1.54
PLOD3-207ENST00000456079 RANGAP1P46060 587 aaPredicted RBP24.62■■□□□ 1.53
PLOD3-207ENST00000456079 GOLGA3Q08378 1498 aa24.61■■□□□ 1.53
PLOD3-207ENST00000456079 TRHP20396 242 aaPredicted RBP24.6■■□□□ 1.53
PLOD3-207ENST00000456079 SAMD9Q5K651 1589 aa24.59■■□□□ 1.53
PLOD3-207ENST00000456079 UACAQ9BZF9 1416 aa24.58■■□□□ 1.53
PLOD3-207ENST00000456079 UBTFP17480 764 aaKnown RBP24.56■■□□□ 1.52
PLOD3-207ENST00000456079 PLB1Q6P1J6 1458 aa24.56■■□□□ 1.52
PLOD3-207ENST00000456079 UHRF1BP1LA0JNW5 1464 aa24.55■■□□□ 1.52
PLOD3-207ENST00000456079 ABCC2Q92887 1545 aa24.52■■□□□ 1.52
PLOD3-207ENST00000456079 FHOD3Q2V2M9 1422 aa24.49■■□□□ 1.51
PLOD3-207ENST00000456079 ABCA8O94911 1581 aa24.49■■□□□ 1.51
PLOD3-207ENST00000456079 MAPKBP1O60336 1514 aa24.48■■□□□ 1.51
PLOD3-207ENST00000456079 NPM1P06748 294 aaKnown RBP eCLIP24.48■■□□□ 1.51
PLOD3-207ENST00000456079 KDM5BQ9UGL1 1544 aa24.45■■□□□ 1.51
PLOD3-207ENST00000456079 ARHGAP35Q9NRY4 1499 aa24.41■■□□□ 1.5
PLOD3-207ENST00000456079 ABCC10Q5T3U5 1492 aa24.4■■□□□ 1.5
PLOD3-207ENST00000456079 ASXL2Q76L83 1435 aa24.39■■□□□ 1.5
PLOD3-207ENST00000456079 KIF13AQ9H1H9 1805 aa24.39■■□□□ 1.49
PLOD3-207ENST00000456079 EFCAB5A4FU69 1503 aa24.39■■□□□ 1.49
PLOD3-207ENST00000456079 ZCCHC11Q5TAX3 1644 aaKnown RBP24.39■■□□□ 1.49
PLOD3-207ENST00000456079 ARID3CA6NKF2 412 aa24.38■■□□□ 1.49
PLOD3-207ENST00000456079 FAM69CQ0P6D2 419 aa24.36■■□□□ 1.49
PLOD3-207ENST00000456079 DIP2BQ9P265 1576 aa24.36■■□□□ 1.49
PLOD3-207ENST00000456079 LOC105371045A0A1W2PR82 267 aa24.33■■□□□ 1.49
PLOD3-207ENST00000456079 ATP10BO94823 1461 aa24.32■■□□□ 1.48
PLOD3-207ENST00000456079 RAPGEF6Q8TEU7 1601 aa24.31■■□□□ 1.48
PLOD3-207ENST00000456079 NUP153P49790 1475 aaKnown RBP24.31■■□□□ 1.48
PLOD3-207ENST00000456079 EPRSP07814 1512 aaKnown RBP24.25■■□□□ 1.47
PLOD3-207ENST00000456079 WDR7Q9Y4E6 1490 aa24.23■■□□□ 1.47
PLOD3-207ENST00000456079 CLIP1P30622 1438 aa24.2■■□□□ 1.46
PLOD3-207ENST00000456079 GLI2P10070 1586 aa24.2■■□□□ 1.46
PLOD3-207ENST00000456079 KCNH8Q96L42 1107 aa24.17■■□□□ 1.46
PLOD3-207ENST00000456079 FMN1Q68DA7 1419 aa24.17■■□□□ 1.46
PLOD3-207ENST00000456079 CDK13Q14004 1512 aaKnown RBP24.15■■□□□ 1.46
PLOD3-207ENST00000456079 PPRC1Q5VV67 1664 aaKnown RBP24.13■■□□□ 1.45
PLOD3-207ENST00000456079 CEP162Q5TB80 1403 aa24.12■■□□□ 1.45
PLOD3-207ENST00000456079 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.12■■□□□ 1.45
PLOD3-207ENST00000456079 HNRNPUL2Q1KMD3 747 aaKnown RBP24.12■■□□□ 1.45
PLOD3-207ENST00000456079 TSPOAP1O95153 1857 aa24.12■■□□□ 1.45
PLOD3-207ENST00000456079 MAP3K4Q9Y6R4 1608 aa24.1■■□□□ 1.45
PLOD3-207ENST00000456079 ATP1B4Q9UN42 357 aaPredicted RBP24.1■■□□□ 1.45
PLOD3-207ENST00000456079 LRRIQ1Q96JM4 1722 aa24.07■■□□□ 1.44
PLOD3-207ENST00000456079 PCF11O94913 1555 aaKnown RBP24.07■■□□□ 1.44
PLOD3-207ENST00000456079 CASKIN1Q8WXD9 1431 aa24.05■■□□□ 1.44
PLOD3-207ENST00000456079 HECW1Q76N89 1606 aa24.05■■□□□ 1.44
PLOD3-207ENST00000456079 CD109Q6YHK3 1445 aa24.01■■□□□ 1.43
PLOD3-207ENST00000456079 PLEKHD1A6NEE1 506 aa24.01■■□□□ 1.43
PLOD3-207ENST00000456079 COL17A1Q9UMD9 1497 aaPredicted RBP24■■□□□ 1.43
PLOD3-207ENST00000456079 ABCA9Q8IUA7 1624 aa23.97■■□□□ 1.43
PLOD3-207ENST00000456079 CFAP43Q8NDM7 1665 aa23.96■■□□□ 1.43
PLOD3-207ENST00000456079 MAGI3Q5TCQ9 1506 aa23.96■■□□□ 1.43
PLOD3-207ENST00000456079 FYCO1Q9BQS8 1478 aa23.95■■□□□ 1.42
PLOD3-207ENST00000456079 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.93■■□□□ 1.424e-6■■■□□ 15.9
PLOD3-207ENST00000456079 KDM6BO15054 1643 aa23.91■■□□□ 1.42
PLOD3-207ENST00000456079 TTC37Q6PGP7 1564 aa23.91■■□□□ 1.42
PLOD3-207ENST00000456079 TEX14Q8IWB6 1497 aa23.89■■□□□ 1.42
PLOD3-207ENST00000456079 TROQ12816 1431 aaPredicted RBP23.88■■□□□ 1.41
PLOD3-207ENST00000456079 KIF14Q15058 1648 aa23.88■■□□□ 1.41
PLOD3-207ENST00000456079 CCDC18Q5T9S5 1454 aa23.87■■□□□ 1.41
PLOD3-207ENST00000456079 CDK11AQ9UQ88 783 aaPredicted RBP23.83■■□□□ 1.41
PLOD3-207ENST00000456079 VPS8Q8N3P4 1428 aa23.8■■□□□ 1.4
PLOD3-207ENST00000456079 PLCH2O75038 1416 aa23.76■■□□□ 1.39
PLOD3-207ENST00000456079 ARAP3Q8WWN8 1544 aa23.76■■□□□ 1.39
PLOD3-207ENST00000456079 NEO1Q92859 1461 aa23.75■■□□□ 1.39
PLOD3-207ENST00000456079 FANCAO15360 1455 aa23.74■■□□□ 1.39
PLOD3-207ENST00000456079 RAPGEF3O95398 923 aa23.73■■□□□ 1.39
PLOD3-207ENST00000456079 AKNAQ7Z591 1439 aa23.72■■□□□ 1.39
PLOD3-207ENST00000456079 PHLDB1Q86UU1 1377 aa23.68■■□□□ 1.38
PLOD3-207ENST00000456079 FRMPD1Q5SYB0 1578 aa23.68■■□□□ 1.38
PLOD3-207ENST00000456079 MYO5CQ9NQX4 1742 aa23.66■■□□□ 1.38
PLOD3-207ENST00000456079 MTUS2Q5JR59 1369 aa23.65■■□□□ 1.38
PLOD3-207ENST00000456079 TIAM1Q13009 1591 aa23.65■■□□□ 1.38
PLOD3-207ENST00000456079 KANK4Q5T7N3 995 aaPredicted RBP23.65■■□□□ 1.38
PLOD3-207ENST00000456079 CDC42BPBQ9Y5S2 1711 aa23.64■■□□□ 1.37
PLOD3-207ENST00000456079 GPATCH8Q9UKJ3 1502 aaKnown RBP23.63■■□□□ 1.37
PLOD3-207ENST00000456079 EFCAB2Q5VUJ9 269 aa23.62■■□□□ 1.37
PLOD3-207ENST00000456079 ARHGAP5Q13017 1502 aa23.61■■□□□ 1.37
PLOD3-207ENST00000456079 DENND4BO75064 1496 aaPredicted RBP23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms