RNA–Protein interactions for RNA: ENST00000455656.1

TMEM56-202, Transcript of transmembrane protein 56, humanhuman

TSL 5

Gene TMEM56, Length 609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-202ENST00000455656 KIAA0586Q9BVV6 1533 aa20.32■□□□□ 0.84
TMEM56-202ENST00000455656 PRG4Q92954 1404 aaPredicted RBP20.3■□□□□ 0.84
TMEM56-202ENST00000455656 JPH4Q96JJ6 628 aa20.29■□□□□ 0.84
TMEM56-202ENST00000455656 RAPGEF2Q9Y4G8 1499 aa20.24■□□□□ 0.83
TMEM56-202ENST00000455656 IQGAP2Q13576 1575 aa20.21■□□□□ 0.83
TMEM56-202ENST00000455656 PRXQ9BXM0 1461 aa20.18■□□□□ 0.82
TMEM56-202ENST00000455656 CTTNBP2Q8WZ74 1663 aa20.16■□□□□ 0.82
TMEM56-202ENST00000455656 ADCY10Q96PN6 1610 aa20.11■□□□□ 0.81
TMEM56-202ENST00000455656 DISP1Q96F81 1524 aa20.11■□□□□ 0.81
TMEM56-202ENST00000455656 UGGT2Q9NYU1 1516 aa20.11■□□□□ 0.81
TMEM56-202ENST00000455656 TRHP20396 242 aaPredicted RBP20.05■□□□□ 0.8
TMEM56-202ENST00000455656 KIAA0556O60303 1618 aa20.05■□□□□ 0.8
TMEM56-202ENST00000455656 EEA1Q15075 1411 aa20.04■□□□□ 0.8
TMEM56-202ENST00000455656 CARMIL2Q6F5E8 1435 aa20.04■□□□□ 0.8
TMEM56-202ENST00000455656 CHIC1Q5VXU3 224 aa20.03■□□□□ 0.8
TMEM56-202ENST00000455656 CSRNP3Q8WYN3 585 aa20.02■□□□□ 0.8
TMEM56-202ENST00000455656 TNIKQ9UKE5 1360 aa20.02■□□□□ 0.8
TMEM56-202ENST00000455656 KIF13AQ9H1H9 1805 aa20.02■□□□□ 0.79
TMEM56-202ENST00000455656 PTPRGP23470 1445 aa20.01■□□□□ 0.79
TMEM56-202ENST00000455656 MAPKBP1O60336 1514 aa19.98■□□□□ 0.79
TMEM56-202ENST00000455656 UHRF1BP1LA0JNW5 1464 aa19.94■□□□□ 0.78
TMEM56-202ENST00000455656 KIF21BO75037 1637 aa19.93■□□□□ 0.78
TMEM56-202ENST00000455656 ABCC2Q92887 1545 aa19.91■□□□□ 0.78
TMEM56-202ENST00000455656 UACAQ9BZF9 1416 aa19.9■□□□□ 0.78
TMEM56-202ENST00000455656 GOLGA3Q08378 1498 aa19.9■□□□□ 0.78
TMEM56-202ENST00000455656 DIP2BQ9P265 1576 aa19.9■□□□□ 0.78
TMEM56-202ENST00000455656 SAMD9Q5K651 1589 aa19.89■□□□□ 0.77
TMEM56-202ENST00000455656 ABCC10Q5T3U5 1492 aa19.88■□□□□ 0.77
TMEM56-202ENST00000455656 TTBK1Q5TCY1 1321 aaPredicted RBP19.88■□□□□ 0.77
TMEM56-202ENST00000455656 FAM9AQ8IZU1 332 aaPredicted RBP19.88■□□□□ 0.77
TMEM56-202ENST00000455656 NPM1P06748 294 aaKnown RBP eCLIP19.85■□□□□ 0.77
TMEM56-202ENST00000455656 ABCA8O94911 1581 aa19.85■□□□□ 0.77
TMEM56-202ENST00000455656 KDM5BQ9UGL1 1544 aa19.85■□□□□ 0.77
TMEM56-202ENST00000455656 ZCCHC11Q5TAX3 1644 aaKnown RBP19.84■□□□□ 0.77
TMEM56-202ENST00000455656 PLB1Q6P1J6 1458 aa19.82■□□□□ 0.76
TMEM56-202ENST00000455656 ASXL2Q76L83 1435 aa19.78■□□□□ 0.76
TMEM56-202ENST00000455656 FAM69CQ0P6D2 419 aa19.76■□□□□ 0.75
TMEM56-202ENST00000455656 GLI2P10070 1586 aa19.74■□□□□ 0.75
TMEM56-202ENST00000455656 PPRC1Q5VV67 1664 aaKnown RBP19.72■□□□□ 0.75
TMEM56-202ENST00000455656 TSPOAP1O95153 1857 aa19.72■□□□□ 0.75
TMEM56-202ENST00000455656 P3H3Q8IVL6 736 aa19.72■□□□□ 0.75
TMEM56-202ENST00000455656 EFCAB5A4FU69 1503 aa19.7■□□□□ 0.74
TMEM56-202ENST00000455656 EPRSP07814 1512 aaKnown RBP19.7■□□□□ 0.74
TMEM56-202ENST00000455656 RAPGEF6Q8TEU7 1601 aa19.69■□□□□ 0.74
TMEM56-202ENST00000455656 MAP3K4Q9Y6R4 1608 aa19.68■□□□□ 0.74
TMEM56-202ENST00000455656 FHOD3Q2V2M9 1422 aa19.68■□□□□ 0.74
TMEM56-202ENST00000455656 WDR7Q9Y4E6 1490 aa19.66■□□□□ 0.74
TMEM56-202ENST00000455656 ATP10BO94823 1461 aa19.64■□□□□ 0.73
TMEM56-202ENST00000455656 RANGAP1P46060 587 aaPredicted RBP19.62■□□□□ 0.73
TMEM56-202ENST00000455656 EHMT2Q96KQ7 1210 aa19.61■□□□□ 0.73
TMEM56-202ENST00000455656 NUP153P49790 1475 aaKnown RBP19.6■□□□□ 0.73
TMEM56-202ENST00000455656 ARHGAP35Q9NRY4 1499 aa19.6■□□□□ 0.73
TMEM56-202ENST00000455656 UBTFP17480 764 aaKnown RBP19.58■□□□□ 0.72
TMEM56-202ENST00000455656 KDM6BO15054 1643 aa19.58■□□□□ 0.72
TMEM56-202ENST00000455656 CFAP43Q8NDM7 1665 aa19.57■□□□□ 0.72
TMEM56-202ENST00000455656 ARID3CA6NKF2 412 aa19.53■□□□□ 0.72
TMEM56-202ENST00000455656 ABCA9Q8IUA7 1624 aa19.51■□□□□ 0.71
TMEM56-202ENST00000455656 COL17A1Q9UMD9 1497 aaPredicted RBP19.49■□□□□ 0.71
TMEM56-202ENST00000455656 MAGI3Q5TCQ9 1506 aa19.49■□□□□ 0.71
TMEM56-202ENST00000455656 LRRIQ1Q96JM4 1722 aa19.48■□□□□ 0.71
TMEM56-202ENST00000455656 TEX14Q8IWB6 1497 aa19.48■□□□□ 0.71
TMEM56-202ENST00000455656 FMN1Q68DA7 1419 aa19.46■□□□□ 0.71
TMEM56-202ENST00000455656 CD109Q6YHK3 1445 aa19.46■□□□□ 0.71
TMEM56-202ENST00000455656 KCNH8Q96L42 1107 aa19.46■□□□□ 0.71
TMEM56-202ENST00000455656 HECW1Q76N89 1606 aa19.45■□□□□ 0.7
TMEM56-202ENST00000455656 CDK13Q14004 1512 aaKnown RBP19.45■□□□□ 0.7
TMEM56-202ENST00000455656 PCF11O94913 1555 aaKnown RBP19.39■□□□□ 0.69
TMEM56-202ENST00000455656 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.37■□□□□ 0.695e-6■□□□□ 9.5
TMEM56-202ENST00000455656 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.37■□□□□ 0.69
TMEM56-202ENST00000455656 HNRNPUL2Q1KMD3 747 aaKnown RBP19.37■□□□□ 0.69
TMEM56-202ENST00000455656 TTC37Q6PGP7 1564 aa19.36■□□□□ 0.69
TMEM56-202ENST00000455656 CLIP1P30622 1438 aa19.35■□□□□ 0.69
TMEM56-202ENST00000455656 PLEKHD1A6NEE1 506 aa19.33■□□□□ 0.68
TMEM56-202ENST00000455656 ARAP3Q8WWN8 1544 aa19.33■□□□□ 0.68
TMEM56-202ENST00000455656 CASKIN1Q8WXD9 1431 aa19.33■□□□□ 0.68
TMEM56-202ENST00000455656 KIF14Q15058 1648 aa19.29■□□□□ 0.68
TMEM56-202ENST00000455656 NEO1Q92859 1461 aa19.29■□□□□ 0.68
TMEM56-202ENST00000455656 FYCO1Q9BQS8 1478 aa19.28■□□□□ 0.68
TMEM56-202ENST00000455656 FRMPD1Q5SYB0 1578 aa19.27■□□□□ 0.67
TMEM56-202ENST00000455656 TROQ12816 1431 aaPredicted RBP19.25■□□□□ 0.67
TMEM56-202ENST00000455656 CCDC18Q5T9S5 1454 aa19.25■□□□□ 0.67
TMEM56-202ENST00000455656 PHLDB1Q86UU1 1377 aa19.25■□□□□ 0.67
TMEM56-202ENST00000455656 ATP1B4Q9UN42 357 aaPredicted RBP19.25■□□□□ 0.67
TMEM56-202ENST00000455656 CEP162Q5TB80 1403 aa19.25■□□□□ 0.67
TMEM56-202ENST00000455656 CFAP74Q9C0B2 1584 aa19.24■□□□□ 0.67
TMEM56-202ENST00000455656 MYO5CQ9NQX4 1742 aa19.24■□□□□ 0.67
TMEM56-202ENST00000455656 RICTORQ6R327 1708 aa19.23■□□□□ 0.67
TMEM56-202ENST00000455656 FANCAO15360 1455 aa19.22■□□□□ 0.67
TMEM56-202ENST00000455656 PLCH2O75038 1416 aa19.2■□□□□ 0.66
TMEM56-202ENST00000455656 KDM4FA0A1W2PPD8 638 aa19.2■□□□□ 0.66
TMEM56-202ENST00000455656 AKNAQ7Z591 1439 aa19.19■□□□□ 0.66
TMEM56-202ENST00000455656 LOC105371045A0A1W2PR82 267 aa19.19■□□□□ 0.66
TMEM56-202ENST00000455656 CDC42BPBQ9Y5S2 1711 aa19.18■□□□□ 0.66
TMEM56-202ENST00000455656 CDK11AQ9UQ88 783 aaPredicted RBP19.18■□□□□ 0.66
TMEM56-202ENST00000455656 RAPGEF3O95398 923 aa19.15■□□□□ 0.66
TMEM56-202ENST00000455656 ADGRL1O94910 1474 aa19.15■□□□□ 0.66
TMEM56-202ENST00000455656 PREX2Q70Z35 1606 aa19.14■□□□□ 0.66
TMEM56-202ENST00000455656 CDC42BPAQ5VT25 1732 aa19.14■□□□□ 0.66
TMEM56-202ENST00000455656 DENND4BO75064 1496 aaPredicted RBP19.13■□□□□ 0.65
TMEM56-202ENST00000455656 ZMYM4Q5VZL5 1548 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms