RNA–Protein interactions for RNA: ENST00000453992.5

NCL-205, Transcript of nucleolin, humanhuman

TSL 4

Gene NCL, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-205ENST00000453992 ARHGEF11O15085 1522 aa32.05■■■□□ 2.72
NCL-205ENST00000453992 SHROOM2Q13796 1616 aa32.05■■■□□ 2.72
NCL-205ENST00000453992 KIAA0586Q9BVV6 1533 aa32.05■■■□□ 2.72
NCL-205ENST00000453992 KIF21BO75037 1637 aa32.04■■■□□ 2.72
NCL-205ENST00000453992 FAM9AQ8IZU1 332 aaPredicted RBP32.03■■■□□ 2.72
NCL-205ENST00000453992 CTTNBP2Q8WZ74 1663 aa31.99■■■□□ 2.71
NCL-205ENST00000453992 IQGAP2Q13576 1575 aa31.95■■■□□ 2.71
NCL-205ENST00000453992 CYB5RLQ6IPT4 315 aa31.89■■■□□ 2.7
NCL-205ENST00000453992 JPH4Q96JJ6 628 aa31.84■■■□□ 2.69
NCL-205ENST00000453992 GOLGA3Q08378 1498 aa31.82■■■□□ 2.68
NCL-205ENST00000453992 ARAP1Q96P48 1450 aa31.81■■■□□ 2.68
NCL-205ENST00000453992 PRG4Q92954 1404 aaPredicted RBP31.81■■■□□ 2.68
NCL-205ENST00000453992 ERCC6L2Q5T890 1561 aa31.8■■■□□ 2.68
NCL-205ENST00000453992 UGGT2Q9NYU1 1516 aa31.79■■■□□ 2.68
NCL-205ENST00000453992 CARMIL2Q6F5E8 1435 aa31.68■■■□□ 2.66
NCL-205ENST00000453992 DISP1Q96F81 1524 aa31.66■■■□□ 2.66
NCL-205ENST00000453992 KIAA0556O60303 1618 aa31.65■■■□□ 2.66
NCL-205ENST00000453992 UBTFP17480 764 aaKnown RBP31.58■■■□□ 2.65
NCL-205ENST00000453992 SAMD9Q5K651 1589 aa31.57■■■□□ 2.64
NCL-205ENST00000453992 TNIKQ9UKE5 1360 aa31.55■■■□□ 2.64
NCL-205ENST00000453992 EHMT2Q96KQ7 1210 aa31.52■■■□□ 2.64
NCL-205ENST00000453992 EFCAB5A4FU69 1503 aa31.51■■■□□ 2.63
NCL-205ENST00000453992 PTPRGP23470 1445 aa31.47■■■□□ 2.63
NCL-205ENST00000453992 ADCY10Q96PN6 1610 aa31.35■■■□□ 2.61
NCL-205ENST00000453992 RANGAP1P46060 587 aaPredicted RBP31.32■■■□□ 2.6
NCL-205ENST00000453992 ARHGAP35Q9NRY4 1499 aa31.31■■■□□ 2.6
NCL-205ENST00000453992 UHRF1BP1LA0JNW5 1464 aa31.3■■■□□ 2.6
NCL-205ENST00000453992 UACAQ9BZF9 1416 aa31.3■■■□□ 2.6
NCL-205ENST00000453992 FHOD3Q2V2M9 1422 aa31.29■■■□□ 2.6
NCL-205ENST00000453992 ABCC2Q92887 1545 aa31.29■■■□□ 2.6
NCL-205ENST00000453992 TTBK1Q5TCY1 1321 aaPredicted RBP31.27■■■□□ 2.6
NCL-205ENST00000453992 TRHP20396 242 aaPredicted RBP31.27■■■□□ 2.6
NCL-205ENST00000453992 P3H3Q8IVL6 736 aa31.27■■■□□ 2.6
NCL-205ENST00000453992 ABCA8O94911 1581 aa31.26■■■□□ 2.6
NCL-205ENST00000453992 CLIP1P30622 1438 aa31.22■■■□□ 2.59
NCL-205ENST00000453992 PLB1Q6P1J6 1458 aa31.21■■■□□ 2.59
NCL-205ENST00000453992 LOC105371045A0A1W2PR82 267 aa31.2■■■□□ 2.59
NCL-205ENST00000453992 RAPGEF6Q8TEU7 1601 aa31.18■■■□□ 2.58
NCL-205ENST00000453992 CEP162Q5TB80 1403 aa31.16■■■□□ 2.58
NCL-205ENST00000453992 FMN1Q68DA7 1419 aa31.15■■■□□ 2.58
NCL-205ENST00000453992 KDM5BQ9UGL1 1544 aa31.14■■■□□ 2.57
NCL-205ENST00000453992 MAPKBP1O60336 1514 aa31.12■■■□□ 2.57
NCL-205ENST00000453992 NPM1P06748 294 aaKnown RBP eCLIP31.11■■■□□ 2.573e-10■■■■□ 19.7
NCL-205ENST00000453992 ZCCHC11Q5TAX3 1644 aaKnown RBP31.09■■■□□ 2.57
NCL-205ENST00000453992 NUP153P49790 1475 aaKnown RBP31.02■■■□□ 2.56
NCL-205ENST00000453992 HECW1Q76N89 1606 aa31.02■■■□□ 2.56
NCL-205ENST00000453992 PCF11O94913 1555 aaKnown RBP30.96■■■□□ 2.55
NCL-205ENST00000453992 ATP10BO94823 1461 aa30.94■■■□□ 2.54
NCL-205ENST00000453992 ASXL2Q76L83 1435 aa30.93■■■□□ 2.54
NCL-205ENST00000453992 CASKIN1Q8WXD9 1431 aa30.93■■■□□ 2.54
NCL-205ENST00000453992 FYCO1Q9BQS8 1478 aa30.92■■■□□ 2.54
NCL-205ENST00000453992 KIF13AQ9H1H9 1805 aa30.89■■■□□ 2.53
NCL-205ENST00000453992 DIP2BQ9P265 1576 aa30.88■■■□□ 2.53
NCL-205ENST00000453992 ABCC10Q5T3U5 1492 aa30.88■■■□□ 2.53
NCL-205ENST00000453992 WDR7Q9Y4E6 1490 aa30.87■■■□□ 2.53
NCL-205ENST00000453992 EPRSP07814 1512 aaKnown RBP30.86■■■□□ 2.53
NCL-205ENST00000453992 LRRIQ1Q96JM4 1722 aa30.86■■■□□ 2.53
NCL-205ENST00000453992 CDK13Q14004 1512 aaKnown RBP30.82■■■□□ 2.52
NCL-205ENST00000453992 CCDC18Q5T9S5 1454 aa30.82■■■□□ 2.52
NCL-205ENST00000453992 ARID3CA6NKF2 412 aa30.81■■■□□ 2.52
NCL-205ENST00000453992 VPS8Q8N3P4 1428 aa30.8■■■□□ 2.52
NCL-205ENST00000453992 GLI2P10070 1586 aa30.79■■■□□ 2.52
NCL-205ENST00000453992 FAM69CQ0P6D2 419 aa30.77■■■□□ 2.52
NCL-205ENST00000453992 ATP1B4Q9UN42 357 aaPredicted RBP30.76■■■□□ 2.51
NCL-205ENST00000453992 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.74■■■□□ 2.51
NCL-205ENST00000453992 HNRNPUL2Q1KMD3 747 aaKnown RBP30.74■■■□□ 2.51
NCL-205ENST00000453992 PLEKHD1A6NEE1 506 aa30.67■■■□□ 2.5
NCL-205ENST00000453992 MAP3K4Q9Y6R4 1608 aa30.66■■■□□ 2.5
NCL-205ENST00000453992 CFAP43Q8NDM7 1665 aa30.66■■■□□ 2.5
NCL-205ENST00000453992 CDK11AQ9UQ88 783 aaPredicted RBP30.66■■■□□ 2.5
NCL-205ENST00000453992 ABCA9Q8IUA7 1624 aa30.63■■■□□ 2.49
NCL-205ENST00000453992 TROQ12816 1431 aaPredicted RBP30.6■■■□□ 2.49
NCL-205ENST00000453992 KCNH8Q96L42 1107 aa30.58■■■□□ 2.49
NCL-205ENST00000453992 TSPOAP1O95153 1857 aa30.57■■■□□ 2.48
NCL-205ENST00000453992 KIF14Q15058 1648 aa30.57■■■□□ 2.48
NCL-205ENST00000453992 TIAM1Q13009 1591 aa30.56■■■□□ 2.48
NCL-205ENST00000453992 MAGI3Q5TCQ9 1506 aa30.56■■■□□ 2.48
NCL-205ENST00000453992 PPRC1Q5VV67 1664 aaKnown RBP30.55■■■□□ 2.48
NCL-205ENST00000453992 MAP3K1Q13233 1512 aa30.54■■■□□ 2.48
NCL-205ENST00000453992 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.52■■■□□ 2.488e-21■□□□□ 9.6
NCL-205ENST00000453992 TTC37Q6PGP7 1564 aa30.5■■■□□ 2.47
NCL-205ENST00000453992 EHBP1L1Q8N3D4 1523 aa30.5■■■□□ 2.47
NCL-205ENST00000453992 CD109Q6YHK3 1445 aa30.49■■■□□ 2.47
NCL-205ENST00000453992 TEX14Q8IWB6 1497 aa30.47■■■□□ 2.47
NCL-205ENST00000453992 MTUS2Q5JR59 1369 aa30.44■■■□□ 2.46
NCL-205ENST00000453992 MYO5CQ9NQX4 1742 aa30.43■■■□□ 2.46
NCL-205ENST00000453992 LRRC9Q6ZRR7 1453 aa30.38■■■□□ 2.45
NCL-205ENST00000453992 ARAP3Q8WWN8 1544 aa30.37■■■□□ 2.45
NCL-205ENST00000453992 CFAP74Q9C0B2 1584 aa30.37■■■□□ 2.45
NCL-205ENST00000453992 SUPT6HQ7KZ85 1726 aaKnown RBP30.36■■■□□ 2.45
NCL-205ENST00000453992 APLP2Q06481 763 aa30.35■■■□□ 2.45
NCL-205ENST00000453992 PREX2Q70Z35 1606 aa30.33■■■□□ 2.45
NCL-205ENST00000453992 PLCH2O75038 1416 aa30.32■■■□□ 2.44
NCL-205ENST00000453992 CDC42BPAQ5VT25 1732 aa30.32■■■□□ 2.44
NCL-205ENST00000453992 NEO1Q92859 1461 aa30.31■■■□□ 2.44
NCL-205ENST00000453992 PHLDB1Q86UU1 1377 aa30.28■■■□□ 2.44
NCL-205ENST00000453992 CDC42BPBQ9Y5S2 1711 aa30.28■■■□□ 2.44
NCL-205ENST00000453992 KDM6BO15054 1643 aa30.28■■■□□ 2.44
NCL-205ENST00000453992 FANCAO15360 1455 aa30.27■■■□□ 2.44
NCL-205ENST00000453992 ITSN2Q9NZM3 1697 aa30.27■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms