RNA–Protein interactions for RNA: ENST00000453358.5

PTPA-224, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 4

Gene PTPA, Length 548 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-224ENST00000453358 RUSC2Q8N2Y8 1516 aa23.08■■□□□ 1.28
PTPA-224ENST00000453358 ABCC10Q5T3U5 1492 aa22.99■■□□□ 1.27
PTPA-224ENST00000453358 FAM69CQ0P6D2 419 aa22.97■■□□□ 1.27
PTPA-224ENST00000453358 MAPKBP1O60336 1514 aa22.97■■□□□ 1.27
PTPA-224ENST00000453358 NPM1P06748 294 aaKnown RBP eCLIP22.96■■□□□ 1.27
PTPA-224ENST00000453358 ADCY10Q96PN6 1610 aa22.94■■□□□ 1.26
PTPA-224ENST00000453358 IGF1RP08069 1367 aa22.94■■□□□ 1.26
PTPA-224ENST00000453358 KIAA0586Q9BVV6 1533 aa22.93■■□□□ 1.26
PTPA-224ENST00000453358 DIP2BQ9P265 1576 aa22.92■■□□□ 1.26
PTPA-224ENST00000453358 KIF27Q86VH2 1401 aa22.89■■□□□ 1.25
PTPA-224ENST00000453358 CUL7Q14999 1698 aa22.87■■□□□ 1.25
PTPA-224ENST00000453358 PTPRGP23470 1445 aa22.78■■□□□ 1.24
PTPA-224ENST00000453358 KDM6BO15054 1643 aa22.77■■□□□ 1.24
PTPA-224ENST00000453358 CARMIL1Q5VZK9 1371 aa22.76■■□□□ 1.23
PTPA-224ENST00000453358 TSPOAP1O95153 1857 aa22.73■■□□□ 1.23
PTPA-224ENST00000453358 TNIKQ9UKE5 1360 aa22.72■■□□□ 1.23
PTPA-224ENST00000453358 KDM4FA0A1W2PPD8 638 aa22.7■■□□□ 1.22
PTPA-224ENST00000453358 TTBK1Q5TCY1 1321 aaPredicted RBP22.7■■□□□ 1.22
PTPA-224ENST00000453358 CARMIL2Q6F5E8 1435 aa22.7■■□□□ 1.22
PTPA-224ENST00000453358 ABCC2Q92887 1545 aa22.69■■□□□ 1.22
PTPA-224ENST00000453358 IQGAP2Q13576 1575 aa22.67■■□□□ 1.22
PTPA-224ENST00000453358 ASXL2Q76L83 1435 aa22.65■■□□□ 1.22
PTPA-224ENST00000453358 UHRF1BP1LA0JNW5 1464 aa22.63■■□□□ 1.21
PTPA-224ENST00000453358 PLB1Q6P1J6 1458 aa22.63■■□□□ 1.21
PTPA-224ENST00000453358 GLI2P10070 1586 aa22.61■■□□□ 1.21
PTPA-224ENST00000453358 DISP1Q96F81 1524 aa22.6■■□□□ 1.21
PTPA-224ENST00000453358 UACAQ9BZF9 1416 aa22.59■■□□□ 1.21
PTPA-224ENST00000453358 PPRC1Q5VV67 1664 aaKnown RBP22.58■■□□□ 1.21
PTPA-224ENST00000453358 UGGT2Q9NYU1 1516 aa22.53■■□□□ 1.2
PTPA-224ENST00000453358 KDM5BQ9UGL1 1544 aa22.53■■□□□ 1.2
PTPA-224ENST00000453358 RAPGEF2Q9Y4G8 1499 aa22.52■■□□□ 1.2
PTPA-224ENST00000453358 EPRSP07814 1512 aaKnown RBP22.52■■□□□ 1.19
PTPA-224ENST00000453358 COL17A1Q9UMD9 1497 aaPredicted RBP22.48■■□□□ 1.19
PTPA-224ENST00000453358 KIAA0556O60303 1618 aa22.46■■□□□ 1.19
PTPA-224ENST00000453358 MAP3K4Q9Y6R4 1608 aa22.46■■□□□ 1.19
PTPA-224ENST00000453358 ZCCHC11Q5TAX3 1644 aaKnown RBP22.46■■□□□ 1.19
PTPA-224ENST00000453358 ADGRL1O94910 1474 aa22.44■■□□□ 1.18
PTPA-224ENST00000453358 TEX14Q8IWB6 1497 aa22.42■■□□□ 1.18
PTPA-224ENST00000453358 WDR7Q9Y4E6 1490 aa22.38■■□□□ 1.17
PTPA-224ENST00000453358 CTTNBP2Q8WZ74 1663 aa22.32■■□□□ 1.16
PTPA-224ENST00000453358 GOLGA3Q08378 1498 aa22.3■■□□□ 1.16
PTPA-224ENST00000453358 ABCA8O94911 1581 aa22.29■■□□□ 1.16
PTPA-224ENST00000453358 ILDR1Q86SU0 546 aaPredicted RBP22.28■■□□□ 1.16
PTPA-224ENST00000453358 MAGI3Q5TCQ9 1506 aa22.27■■□□□ 1.16
PTPA-224ENST00000453358 CD109Q6YHK3 1445 aa22.27■■□□□ 1.16
PTPA-224ENST00000453358 CFAP43Q8NDM7 1665 aa22.24■■□□□ 1.15
PTPA-224ENST00000453358 PRXQ9BXM0 1461 aa22.24■■□□□ 1.15
PTPA-224ENST00000453358 KCNH8Q96L42 1107 aa22.24■■□□□ 1.15
PTPA-224ENST00000453358 HECW2Q9P2P5 1572 aa22.21■■□□□ 1.15
PTPA-224ENST00000453358 ATP10BO94823 1461 aa22.11■■□□□ 1.13
PTPA-224ENST00000453358 ARAP3Q8WWN8 1544 aa22.11■■□□□ 1.13
PTPA-224ENST00000453358 ARID3CA6NKF2 412 aa22.1■■□□□ 1.13
PTPA-224ENST00000453358 P3H3Q8IVL6 736 aa22.09■■□□□ 1.13
PTPA-224ENST00000453358 KIF21BO75037 1637 aa22.09■■□□□ 1.13
PTPA-224ENST00000453358 FAM9AQ8IZU1 332 aaPredicted RBP22.05■■□□□ 1.12
PTPA-224ENST00000453358 ABCA9Q8IUA7 1624 aa22.04■■□□□ 1.12
PTPA-224ENST00000453358 PHLDB1Q86UU1 1377 aa22.02■■□□□ 1.12
PTPA-224ENST00000453358 SAMD9Q5K651 1589 aa22.02■■□□□ 1.12
PTPA-224ENST00000453358 CSRNP3Q8WYN3 585 aa21.98■■□□□ 1.11
PTPA-224ENST00000453358 RAPGEF6Q8TEU7 1601 aa21.98■■□□□ 1.11
PTPA-224ENST00000453358 NEO1Q92859 1461 aa21.96■■□□□ 1.11
PTPA-224ENST00000453358 RAPGEF3O95398 923 aa21.96■■□□□ 1.11
PTPA-224ENST00000453358 ADAMTSL3P82987 1691 aa21.94■■□□□ 1.1
PTPA-224ENST00000453358 PTPRMP28827 1452 aa21.93■■□□□ 1.1
PTPA-224ENST00000453358 NUP153P49790 1475 aaKnown RBP21.92■■□□□ 1.1
PTPA-224ENST00000453358 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.91■■□□□ 1.1
PTPA-224ENST00000453358 HNRNPUL2Q1KMD3 747 aaKnown RBP21.91■■□□□ 1.1
PTPA-224ENST00000453358 FRMPD1Q5SYB0 1578 aa21.91■■□□□ 1.1
PTPA-224ENST00000453358 FHOD3Q2V2M9 1422 aa21.87■■□□□ 1.09
PTPA-224ENST00000453358 BCORL1Q5H9F3 1711 aa21.85■■□□□ 1.09
PTPA-224ENST00000453358 EEA1Q15075 1411 aa21.83■■□□□ 1.09
PTPA-224ENST00000453358 RANGAP1P46060 587 aaPredicted RBP21.83■■□□□ 1.09
PTPA-224ENST00000453358 MADDQ8WXG6 1647 aa21.83■■□□□ 1.08
PTPA-224ENST00000453358 ARID4BQ4LE39 1312 aaPredicted RBP21.81■■□□□ 1.08
PTPA-224ENST00000453358 ARHGEF40Q8TER5 1519 aa21.8■■□□□ 1.08
PTPA-224ENST00000453358 DENND4BO75064 1496 aaPredicted RBP21.8■■□□□ 1.08
PTPA-224ENST00000453358 PLEKHD1A6NEE1 506 aa21.8■■□□□ 1.08
PTPA-224ENST00000453358 FBXO41Q8TF61 875 aa21.79■■□□□ 1.08
PTPA-224ENST00000453358 AKNAQ7Z591 1439 aa21.79■■□□□ 1.08
PTPA-224ENST00000453358 RICTORQ6R327 1708 aa21.78■■□□□ 1.08
PTPA-224ENST00000453358 PCF11O94913 1555 aaKnown RBP21.78■■□□□ 1.08
PTPA-224ENST00000453358 FANCAO15360 1455 aa21.77■■□□□ 1.08
PTPA-224ENST00000453358 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.77■■□□□ 1.08
PTPA-224ENST00000453358 LMTK3Q96Q04 1460 aa21.76■■□□□ 1.07
PTPA-224ENST00000453358 CFAP74Q9C0B2 1584 aa21.74■■□□□ 1.07
PTPA-224ENST00000453358 EFCAB5A4FU69 1503 aa21.74■■□□□ 1.07
PTPA-224ENST00000453358 TTC37Q6PGP7 1564 aa21.73■■□□□ 1.07
PTPA-224ENST00000453358 ZMYM4Q5VZL5 1548 aa21.72■■□□□ 1.07
PTPA-224ENST00000453358 RIMS1Q86UR5 1692 aaKnown RBP21.72■■□□□ 1.07
PTPA-224ENST00000453358 YEATS2Q9ULM3 1422 aa21.69■■□□□ 1.06
PTPA-224ENST00000453358 CDK13Q14004 1512 aaKnown RBP21.68■■□□□ 1.06
PTPA-224ENST00000453358 ZFYVE16Q7Z3T8 1539 aa21.67■■□□□ 1.06
PTPA-224ENST00000453358 POGZQ7Z3K3 1410 aa21.67■■□□□ 1.06
PTPA-224ENST00000453358 SIGLEC1Q9BZZ2 1709 aa21.66■■□□□ 1.06
PTPA-224ENST00000453358 MAGI2Q86UL8 1455 aa21.65■■□□□ 1.06
PTPA-224ENST00000453358 HECW1Q76N89 1606 aa21.63■■□□□ 1.05
PTPA-224ENST00000453358 PLCH2O75038 1416 aa21.63■■□□□ 1.05
PTPA-224ENST00000453358 HSPA2P54652 639 aa21.62■■□□□ 1.05
PTPA-224ENST00000453358 SCAPERQ9BY12 1400 aa21.62■■□□□ 1.05
PTPA-224ENST00000453358 PLPPR3Q6T4P5 718 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms