RNA–Protein interactions for RNA: ENST00000452111.5

CTNS-204, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3

Gene CTNS, Length 617 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-204ENST00000452111 JPH4Q96JJ6 628 aa30.67■■■□□ 2.5
CTNS-204ENST00000452111 PRG4Q92954 1404 aaPredicted RBP30.65■■■□□ 2.5
CTNS-204ENST00000452111 TRHP20396 242 aaPredicted RBP30.61■■■□□ 2.49
CTNS-204ENST00000452111 KIAA0586Q9BVV6 1533 aa30.58■■■□□ 2.49
CTNS-204ENST00000452111 RAPGEF2Q9Y4G8 1499 aa30.45■■■□□ 2.47
CTNS-204ENST00000452111 IQGAP2Q13576 1575 aa30.36■■■□□ 2.45
CTNS-204ENST00000452111 CARMIL2Q6F5E8 1435 aa30.29■■■□□ 2.44
CTNS-204ENST00000452111 TTBK1Q5TCY1 1321 aaPredicted RBP30.27■■■□□ 2.44
CTNS-204ENST00000452111 PRXQ9BXM0 1461 aa30.25■■■□□ 2.43
CTNS-204ENST00000452111 PTPRGP23470 1445 aa30.24■■■□□ 2.43
CTNS-204ENST00000452111 TNIKQ9UKE5 1360 aa30.22■■■□□ 2.43
CTNS-204ENST00000452111 NPM1P06748 294 aaKnown RBP eCLIP30.2■■■□□ 2.43
CTNS-204ENST00000452111 ADCY10Q96PN6 1610 aa30.2■■■□□ 2.43
CTNS-204ENST00000452111 DISP1Q96F81 1524 aa30.19■■■□□ 2.42
CTNS-204ENST00000452111 UGGT2Q9NYU1 1516 aa30.18■■■□□ 2.42
CTNS-204ENST00000452111 CSRNP3Q8WYN3 585 aa30.16■■■□□ 2.42
CTNS-204ENST00000452111 CTTNBP2Q8WZ74 1663 aa30.11■■■□□ 2.41
CTNS-204ENST00000452111 EEA1Q15075 1411 aa30.09■■■□□ 2.41
CTNS-204ENST00000452111 KIAA0556O60303 1618 aa30.08■■■□□ 2.41
CTNS-204ENST00000452111 MAPKBP1O60336 1514 aa30.06■■■□□ 2.4
CTNS-204ENST00000452111 FAM9AQ8IZU1 332 aaPredicted RBP30.06■■■□□ 2.4
CTNS-204ENST00000452111 CHIC1Q5VXU3 224 aa30.04■■■□□ 2.4
CTNS-204ENST00000452111 UACAQ9BZF9 1416 aa30.02■■■□□ 2.4
CTNS-204ENST00000452111 ABCC10Q5T3U5 1492 aa30■■■□□ 2.39
CTNS-204ENST00000452111 FAM69CQ0P6D2 419 aa30■■■□□ 2.39
CTNS-204ENST00000452111 ABCC2Q92887 1545 aa30■■■□□ 2.39
CTNS-204ENST00000452111 GOLGA3Q08378 1498 aa29.99■■■□□ 2.39
CTNS-204ENST00000452111 UHRF1BP1LA0JNW5 1464 aa29.98■■■□□ 2.39
CTNS-204ENST00000452111 KIF13AQ9H1H9 1805 aa29.97■■■□□ 2.39
CTNS-204ENST00000452111 DIP2BQ9P265 1576 aa29.93■■■□□ 2.38
CTNS-204ENST00000452111 ASXL2Q76L83 1435 aa29.87■■■□□ 2.37
CTNS-204ENST00000452111 PLB1Q6P1J6 1458 aa29.87■■■□□ 2.37
CTNS-204ENST00000452111 P3H3Q8IVL6 736 aa29.84■■■□□ 2.37
CTNS-204ENST00000452111 KDM5BQ9UGL1 1544 aa29.84■■■□□ 2.37
CTNS-204ENST00000452111 KIF21BO75037 1637 aa29.8■■■□□ 2.36
CTNS-204ENST00000452111 RANGAP1P46060 587 aaPredicted RBP29.79■■■□□ 2.36
CTNS-204ENST00000452111 ZCCHC11Q5TAX3 1644 aaKnown RBP29.77■■■□□ 2.36
CTNS-204ENST00000452111 ABCA8O94911 1581 aa29.77■■■□□ 2.36
CTNS-204ENST00000452111 EHMT2Q96KQ7 1210 aa29.75■■■□□ 2.35
CTNS-204ENST00000452111 SAMD9Q5K651 1589 aa29.74■■■□□ 2.35
CTNS-204ENST00000452111 EPRSP07814 1512 aaKnown RBP29.68■■■□□ 2.34
CTNS-204ENST00000452111 GLI2P10070 1586 aa29.67■■■□□ 2.34
CTNS-204ENST00000452111 TSPOAP1O95153 1857 aa29.65■■■□□ 2.34
CTNS-204ENST00000452111 WDR7Q9Y4E6 1490 aa29.65■■■□□ 2.34
CTNS-204ENST00000452111 ARID3CA6NKF2 412 aa29.64■■■□□ 2.34
CTNS-204ENST00000452111 UBTFP17480 764 aaKnown RBP29.64■■■□□ 2.34
CTNS-204ENST00000452111 FHOD3Q2V2M9 1422 aa29.63■■■□□ 2.33
CTNS-204ENST00000452111 EFCAB5A4FU69 1503 aa29.55■■■□□ 2.32
CTNS-204ENST00000452111 KDM6BO15054 1643 aa29.55■■■□□ 2.32
CTNS-204ENST00000452111 ATP10BO94823 1461 aa29.55■■■□□ 2.32
CTNS-204ENST00000452111 KCNH8Q96L42 1107 aa29.54■■■□□ 2.32
CTNS-204ENST00000452111 RAPGEF6Q8TEU7 1601 aa29.53■■■□□ 2.32
CTNS-204ENST00000452111 PPRC1Q5VV67 1664 aaKnown RBP29.52■■■□□ 2.32
CTNS-204ENST00000452111 MAP3K4Q9Y6R4 1608 aa29.52■■■□□ 2.32
CTNS-204ENST00000452111 NUP153P49790 1475 aaKnown RBP29.47■■■□□ 2.31
CTNS-204ENST00000452111 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.46■■■□□ 2.31
CTNS-204ENST00000452111 HNRNPUL2Q1KMD3 747 aaKnown RBP29.46■■■□□ 2.31
CTNS-204ENST00000452111 TEX14Q8IWB6 1497 aa29.44■■■□□ 2.3
CTNS-204ENST00000452111 CD109Q6YHK3 1445 aa29.42■■■□□ 2.3
CTNS-204ENST00000452111 ARHGAP35Q9NRY4 1499 aa29.39■■■□□ 2.3
CTNS-204ENST00000452111 CFAP43Q8NDM7 1665 aa29.36■■■□□ 2.29
CTNS-204ENST00000452111 COL17A1Q9UMD9 1497 aaPredicted RBP29.35■■■□□ 2.29
CTNS-204ENST00000452111 MAGI3Q5TCQ9 1506 aa29.35■■■□□ 2.29
CTNS-204ENST00000452111 AEBP2Q6ZN18 517 aaPredicted RBP29.31■■■□□ 2.28
CTNS-204ENST00000452111 FMN1Q68DA7 1419 aa29.3■■■□□ 2.28
CTNS-204ENST00000452111 PLEKHD1A6NEE1 506 aa29.27■■■□□ 2.28
CTNS-204ENST00000452111 ATP1B4Q9UN42 357 aaPredicted RBP29.27■■■□□ 2.28
CTNS-204ENST00000452111 ABCA9Q8IUA7 1624 aa29.25■■■□□ 2.27
CTNS-204ENST00000452111 CDK13Q14004 1512 aaKnown RBP29.25■■■□□ 2.27
CTNS-204ENST00000452111 HECW1Q76N89 1606 aa29.2■■■□□ 2.26
CTNS-204ENST00000452111 CLIP1P30622 1438 aa29.11■■■□□ 2.25
CTNS-204ENST00000452111 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.1■■■□□ 2.25
CTNS-204ENST00000452111 ARAP3Q8WWN8 1544 aa29.1■■■□□ 2.25
CTNS-204ENST00000452111 KDM4FA0A1W2PPD8 638 aa29.08■■■□□ 2.25
CTNS-204ENST00000452111 PHLDB1Q86UU1 1377 aa29.08■■■□□ 2.25
CTNS-204ENST00000452111 NEO1Q92859 1461 aa29.08■■■□□ 2.25
CTNS-204ENST00000452111 CDK11AQ9UQ88 783 aaPredicted RBP29.06■■■□□ 2.24
CTNS-204ENST00000452111 TTC37Q6PGP7 1564 aa29.05■■■□□ 2.24
CTNS-204ENST00000452111 PCF11O94913 1555 aaKnown RBP29.05■■■□□ 2.24
CTNS-204ENST00000452111 CASKIN1Q8WXD9 1431 aa29.04■■■□□ 2.24
CTNS-204ENST00000452111 RAPGEF3O95398 923 aa29■■■□□ 2.23
CTNS-204ENST00000452111 FANCAO15360 1455 aa28.99■■■□□ 2.23
CTNS-204ENST00000452111 TROQ12816 1431 aaPredicted RBP28.98■■■□□ 2.23
CTNS-204ENST00000452111 LRRIQ1Q96JM4 1722 aa28.97■■■□□ 2.23
CTNS-204ENST00000452111 ADGRL1O94910 1474 aa28.97■■■□□ 2.23
CTNS-204ENST00000452111 AKNAQ7Z591 1439 aa28.95■■■□□ 2.23
CTNS-204ENST00000452111 CCDC18Q5T9S5 1454 aa28.95■■■□□ 2.22
CTNS-204ENST00000452111 FYCO1Q9BQS8 1478 aa28.95■■■□□ 2.22
CTNS-204ENST00000452111 KIF14Q15058 1648 aa28.93■■■□□ 2.22
CTNS-204ENST00000452111 PLCH2O75038 1416 aa28.92■■■□□ 2.22
CTNS-204ENST00000452111 CFAP74Q9C0B2 1584 aa28.92■■■□□ 2.22
CTNS-204ENST00000452111 CEP162Q5TB80 1403 aa28.91■■■□□ 2.22
CTNS-204ENST00000452111 FRMPD1Q5SYB0 1578 aa28.9■■■□□ 2.22
CTNS-204ENST00000452111 DENND4BO75064 1496 aaPredicted RBP28.9■■■□□ 2.22
CTNS-204ENST00000452111 LOC105371045A0A1W2PR82 267 aa28.85■■■□□ 2.21
CTNS-204ENST00000452111 EFCAB2Q5VUJ9 269 aa28.82■■■□□ 2.2
CTNS-204ENST00000452111 MYO5CQ9NQX4 1742 aa28.82■■■□□ 2.2
CTNS-204ENST00000452111 SCAPERQ9BY12 1400 aa28.8■■■□□ 2.2
CTNS-204ENST00000452111 RICTORQ6R327 1708 aa28.79■■■□□ 2.2
CTNS-204ENST00000452111 ARHGAP5Q13017 1502 aa28.79■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms