RNA–Protein interactions for RNA: ENST00000451542.5

SMPD4-212, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 796 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-212ENST00000451542 EEA1Q15075 1411 aa20.1■□□□□ 0.81
SMPD4-212ENST00000451542 KIAA0586Q9BVV6 1533 aa20.1■□□□□ 0.81
SMPD4-212ENST00000451542 ARAP1Q96P48 1450 aa20.08■□□□□ 0.81
SMPD4-212ENST00000451542 SHROOM2Q13796 1616 aa20.07■□□□□ 0.8
SMPD4-212ENST00000451542 CSRNP3Q8WYN3 585 aa20.06■□□□□ 0.8
SMPD4-212ENST00000451542 PRG4Q92954 1404 aaPredicted RBP20.03■□□□□ 0.8
SMPD4-212ENST00000451542 PRXQ9BXM0 1461 aa19.99■□□□□ 0.79
SMPD4-212ENST00000451542 IQGAP2Q13576 1575 aa19.97■□□□□ 0.79
SMPD4-212ENST00000451542 FAM9AQ8IZU1 332 aaPredicted RBP19.96■□□□□ 0.79
SMPD4-212ENST00000451542 CARMIL2Q6F5E8 1435 aa19.95■□□□□ 0.78
SMPD4-212ENST00000451542 ERCC6L2Q5T890 1561 aa19.95■□□□□ 0.78
SMPD4-212ENST00000451542 CTTNBP2Q8WZ74 1663 aa19.91■□□□□ 0.78
SMPD4-212ENST00000451542 UGGT2Q9NYU1 1516 aa19.85■□□□□ 0.77
SMPD4-212ENST00000451542 TNIKQ9UKE5 1360 aa19.84■□□□□ 0.77
SMPD4-212ENST00000451542 GOLGA3Q08378 1498 aa19.83■□□□□ 0.76
SMPD4-212ENST00000451542 PTPRGP23470 1445 aa19.83■□□□□ 0.76
SMPD4-212ENST00000451542 NPM1P06748 294 aaKnown RBP eCLIP19.82■□□□□ 0.76
SMPD4-212ENST00000451542 KIF21BO75037 1637 aa19.82■□□□□ 0.76
SMPD4-212ENST00000451542 TTBK1Q5TCY1 1321 aaPredicted RBP19.79■□□□□ 0.76
SMPD4-212ENST00000451542 TRHP20396 242 aaPredicted RBP19.78■□□□□ 0.76
SMPD4-212ENST00000451542 DISP1Q96F81 1524 aa19.77■□□□□ 0.76
SMPD4-212ENST00000451542 KIAA0556O60303 1618 aa19.76■□□□□ 0.75
SMPD4-212ENST00000451542 UBTFP17480 764 aaKnown RBP19.74■□□□□ 0.75
SMPD4-212ENST00000451542 UACAQ9BZF9 1416 aa19.68■□□□□ 0.74
SMPD4-212ENST00000451542 ADCY10Q96PN6 1610 aa19.67■□□□□ 0.74
SMPD4-212ENST00000451542 EHMT2Q96KQ7 1210 aa19.66■□□□□ 0.74
SMPD4-212ENST00000451542 RANGAP1P46060 587 aaPredicted RBP19.65■□□□□ 0.74
SMPD4-212ENST00000451542 UHRF1BP1LA0JNW5 1464 aa19.65■□□□□ 0.74
SMPD4-212ENST00000451542 P3H3Q8IVL6 736 aa19.63■□□□□ 0.73
SMPD4-212ENST00000451542 ABCC2Q92887 1545 aa19.62■□□□□ 0.73
SMPD4-212ENST00000451542 SAMD9Q5K651 1589 aa19.61■□□□□ 0.73
SMPD4-212ENST00000451542 MAPKBP1O60336 1514 aa19.61■□□□□ 0.73
SMPD4-212ENST00000451542 EFCAB5A4FU69 1503 aa19.6■□□□□ 0.73
SMPD4-212ENST00000451542 PLB1Q6P1J6 1458 aa19.54■□□□□ 0.72
SMPD4-212ENST00000451542 KDM5BQ9UGL1 1544 aa19.54■□□□□ 0.72
SMPD4-212ENST00000451542 ABCA8O94911 1581 aa19.53■□□□□ 0.72
SMPD4-212ENST00000451542 FAM69CQ0P6D2 419 aa19.52■□□□□ 0.72
SMPD4-212ENST00000451542 ABCC10Q5T3U5 1492 aa19.51■□□□□ 0.71
SMPD4-212ENST00000451542 FHOD3Q2V2M9 1422 aa19.51■□□□□ 0.71
SMPD4-212ENST00000451542 ASXL2Q76L83 1435 aa19.49■□□□□ 0.71
SMPD4-212ENST00000451542 ZCCHC11Q5TAX3 1644 aaKnown RBP19.48■□□□□ 0.71
SMPD4-212ENST00000451542 RAPGEF6Q8TEU7 1601 aa19.46■□□□□ 0.71
SMPD4-212ENST00000451542 KIF13AQ9H1H9 1805 aa19.46■□□□□ 0.71
SMPD4-212ENST00000451542 DIP2BQ9P265 1576 aa19.45■□□□□ 0.7
SMPD4-212ENST00000451542 FMN1Q68DA7 1419 aa19.45■□□□□ 0.7
SMPD4-212ENST00000451542 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.44■□□□□ 0.7
SMPD4-212ENST00000451542 HNRNPUL2Q1KMD3 747 aaKnown RBP19.44■□□□□ 0.7
SMPD4-212ENST00000451542 ARHGAP35Q9NRY4 1499 aa19.43■□□□□ 0.7
SMPD4-212ENST00000451542 WDR7Q9Y4E6 1490 aa19.41■□□□□ 0.7
SMPD4-212ENST00000451542 ARID3CA6NKF2 412 aa19.39■□□□□ 0.69
SMPD4-212ENST00000451542 ATP10BO94823 1461 aa19.38■□□□□ 0.69
SMPD4-212ENST00000451542 GLI2P10070 1586 aa19.38■□□□□ 0.69
SMPD4-212ENST00000451542 CLIP1P30622 1438 aa19.37■□□□□ 0.69
SMPD4-212ENST00000451542 ATP1B4Q9UN42 357 aaPredicted RBP19.37■□□□□ 0.69
SMPD4-212ENST00000451542 EPRSP07814 1512 aaKnown RBP19.36■□□□□ 0.69
SMPD4-212ENST00000451542 NUP153P49790 1475 aaKnown RBP19.35■□□□□ 0.69
SMPD4-212ENST00000451542 KCNH8Q96L42 1107 aa19.35■□□□□ 0.69
SMPD4-212ENST00000451542 PLEKHD1A6NEE1 506 aa19.34■□□□□ 0.69
SMPD4-212ENST00000451542 TSPOAP1O95153 1857 aa19.32■□□□□ 0.68
SMPD4-212ENST00000451542 HECW1Q76N89 1606 aa19.32■□□□□ 0.68
SMPD4-212ENST00000451542 CDK11AQ9UQ88 783 aaPredicted RBP19.31■□□□□ 0.68
SMPD4-212ENST00000451542 TEX14Q8IWB6 1497 aa19.28■□□□□ 0.68
SMPD4-212ENST00000451542 CEP162Q5TB80 1403 aa19.26■□□□□ 0.67
SMPD4-212ENST00000451542 LOC105371045A0A1W2PR82 267 aa19.26■□□□□ 0.67
SMPD4-212ENST00000451542 MAP3K4Q9Y6R4 1608 aa19.25■□□□□ 0.67
SMPD4-212ENST00000451542 CFAP43Q8NDM7 1665 aa19.25■□□□□ 0.67
SMPD4-212ENST00000451542 CD109Q6YHK3 1445 aa19.25■□□□□ 0.67
SMPD4-212ENST00000451542 CASKIN1Q8WXD9 1431 aa19.25■□□□□ 0.67
SMPD4-212ENST00000451542 CCDC18Q5T9S5 1454 aa19.22■□□□□ 0.67
SMPD4-212ENST00000451542 CDK13Q14004 1512 aaKnown RBP19.2■□□□□ 0.66
SMPD4-212ENST00000451542 FYCO1Q9BQS8 1478 aa19.2■□□□□ 0.66
SMPD4-212ENST00000451542 KDM6BO15054 1643 aa19.19■□□□□ 0.66
SMPD4-212ENST00000451542 MAGI3Q5TCQ9 1506 aa19.19■□□□□ 0.66
SMPD4-212ENST00000451542 PCF11O94913 1555 aaKnown RBP19.19■□□□□ 0.66
SMPD4-212ENST00000451542 ABCA9Q8IUA7 1624 aa19.18■□□□□ 0.66
SMPD4-212ENST00000451542 PPRC1Q5VV67 1664 aaKnown RBP19.17■□□□□ 0.66
SMPD4-212ENST00000451542 PHLDB1Q86UU1 1377 aa19.14■□□□□ 0.65
SMPD4-212ENST00000451542 TROQ12816 1431 aaPredicted RBP19.13■□□□□ 0.65
SMPD4-212ENST00000451542 KIF14Q15058 1648 aa19.09■□□□□ 0.65
SMPD4-212ENST00000451542 LRRIQ1Q96JM4 1722 aa19.08■□□□□ 0.65
SMPD4-212ENST00000451542 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.08■□□□□ 0.64
SMPD4-212ENST00000451542 NEO1Q92859 1461 aa19.07■□□□□ 0.64
SMPD4-212ENST00000451542 VPS8Q8N3P4 1428 aa19.05■□□□□ 0.64
SMPD4-212ENST00000451542 CFAP74Q9C0B2 1584 aa19.04■□□□□ 0.64
SMPD4-212ENST00000451542 MTUS2Q5JR59 1369 aa19.04■□□□□ 0.64
SMPD4-212ENST00000451542 TTC37Q6PGP7 1564 aa19.03■□□□□ 0.64
SMPD4-212ENST00000451542 ARAP3Q8WWN8 1544 aa19.02■□□□□ 0.64
SMPD4-212ENST00000451542 EFCAB2Q5VUJ9 269 aa19.02■□□□□ 0.64
SMPD4-212ENST00000451542 FANCAO15360 1455 aa19.02■□□□□ 0.63
SMPD4-212ENST00000451542 PLCH2O75038 1416 aa19.01■□□□□ 0.63
SMPD4-212ENST00000451542 MYO5CQ9NQX4 1742 aa19.01■□□□□ 0.63
SMPD4-212ENST00000451542 APLP2Q06481 763 aa19■□□□□ 0.63
SMPD4-212ENST00000451542 COL17A1Q9UMD9 1497 aaPredicted RBP18.99■□□□□ 0.63
SMPD4-212ENST00000451542 AKNAQ7Z591 1439 aa18.99■□□□□ 0.63
SMPD4-212ENST00000451542 ARHGAP5Q13017 1502 aa18.95■□□□□ 0.62
SMPD4-212ENST00000451542 DENND4BO75064 1496 aaPredicted RBP18.95■□□□□ 0.62
SMPD4-212ENST00000451542 EHBP1L1Q8N3D4 1523 aa18.95■□□□□ 0.62
SMPD4-212ENST00000451542 ADGRL1O94910 1474 aa18.92■□□□□ 0.62
SMPD4-212ENST00000451542 TIAM1Q13009 1591 aa18.91■□□□□ 0.62
SMPD4-212ENST00000451542 RAPGEF3O95398 923 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms