RNA–Protein interactions for RNA: ENST00000450428.5

RAB11FIP3-205, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2 BASIC

Gene RAB11FIP3, Length 3,203 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-205ENST00000450428 VPS8Q8N3P4 1428 aa17.17■□□□□ 0.34
RAB11FIP3-205ENST00000450428 ATP1B4Q9UN42 357 aaPredicted RBP17.17■□□□□ 0.34
RAB11FIP3-205ENST00000450428 FGD5Q6ZNL6 1462 aa17.17■□□□□ 0.34
RAB11FIP3-205ENST00000450428 PRXQ9BXM0 1461 aa17.16■□□□□ 0.34
RAB11FIP3-205ENST00000450428 MSH5O43196 834 aa17.15■□□□□ 0.34
RAB11FIP3-205ENST00000450428 P3H3Q8IVL6 736 aa17.14■□□□□ 0.33
RAB11FIP3-205ENST00000450428 IGF1RP08069 1367 aa17.13■□□□□ 0.33
RAB11FIP3-205ENST00000450428 CARMIL1Q5VZK9 1371 aa17.12■□□□□ 0.33
RAB11FIP3-205ENST00000450428 RAD54L2Q9Y4B4 1467 aa17.09■□□□□ 0.33
RAB11FIP3-205ENST00000450428 NBR1Q14596 966 aa17.07■□□□□ 0.32
RAB11FIP3-205ENST00000450428 ERICH3Q5RHP9 1530 aa17.06■□□□□ 0.32
RAB11FIP3-205ENST00000450428 KANK4Q5T7N3 995 aaPredicted RBP17.04■□□□□ 0.32
RAB11FIP3-205ENST00000450428 TDRD9Q8NDG6 1382 aaKnown RBP17.02■□□□□ 0.31
RAB11FIP3-205ENST00000450428 PDS5BQ9NTI5 1447 aa17.01■□□□□ 0.31
RAB11FIP3-205ENST00000450428 TOPBP1Q92547 1522 aa17■□□□□ 0.31
RAB11FIP3-205ENST00000450428 ARAP1Q96P48 1450 aa17■□□□□ 0.31
RAB11FIP3-205ENST00000450428 DEKP35659 375 aaKnown RBP16.99■□□□□ 0.31
RAB11FIP3-205ENST00000450428 ANO8Q9HCE9 1232 aaPredicted RBP16.99■□□□□ 0.31
RAB11FIP3-205ENST00000450428 POLA1P09884 1462 aaPredicted RBP16.99■□□□□ 0.31
RAB11FIP3-205ENST00000450428 CDK11AQ9UQ88 783 aaPredicted RBP16.97■□□□□ 0.31
RAB11FIP3-205ENST00000450428 RTN4Q9NQC3 1192 aaKnown RBP16.95■□□□□ 0.3
RAB11FIP3-205ENST00000450428 PRDM2Q13029 1718 aa16.95■□□□□ 0.3
RAB11FIP3-205ENST00000450428 DNMBPQ6XZF7 1577 aa16.94■□□□□ 0.3
RAB11FIP3-205ENST00000450428 CCDC136Q96JN2 1154 aa16.94■□□□□ 0.3
RAB11FIP3-205ENST00000450428 ARHGAP35Q9NRY4 1499 aa16.93■□□□□ 0.3
RAB11FIP3-205ENST00000450428 DHX57Q6P158 1386 aaKnown RBP16.93■□□□□ 0.3
RAB11FIP3-205ENST00000450428 LAMC3Q9Y6N6 1575 aa16.91■□□□□ 0.3
RAB11FIP3-205ENST00000450428 URB2Q14146 1524 aaKnown RBP16.91■□□□□ 0.3
RAB11FIP3-205ENST00000450428 SIN3AQ96ST3 1273 aa16.88■□□□□ 0.29
RAB11FIP3-205ENST00000450428 CNGB1Q14028 1251 aaPredicted RBP16.88■□□□□ 0.29
RAB11FIP3-205ENST00000450428 ABCA10Q8WWZ4 1543 aa16.88■□□□□ 0.29
RAB11FIP3-205ENST00000450428 ANP32CO43423 234 aa16.86■□□□□ 0.29
RAB11FIP3-205ENST00000450428 HNRNPUQ00839 825 aaKnown RBP eCLIP16.86■□□□□ 0.29
RAB11FIP3-205ENST00000450428 FAM50AQ14320 339 aaKnown RBP16.84■□□□□ 0.29
RAB11FIP3-205ENST00000450428 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.83■□□□□ 0.28
RAB11FIP3-205ENST00000450428 FHOD3Q2V2M9 1422 aa16.82■□□□□ 0.28
RAB11FIP3-205ENST00000450428 GAPVD1Q14C86 1478 aa16.81■□□□□ 0.28
RAB11FIP3-205ENST00000450428 SENP3-EIF4A1A0A087X0R7 540 aa16.81■□□□□ 0.28
RAB11FIP3-205ENST00000450428 SALL2Q9Y467 1007 aaPredicted RBP16.8■□□□□ 0.28
RAB11FIP3-205ENST00000450428 B4GALNT3Q6L9W6 998 aa16.79■□□□□ 0.28
RAB11FIP3-205ENST00000450428 FHAD1B1AJZ9 1412 aa16.76■□□□□ 0.27
RAB11FIP3-205ENST00000450428 ARID3CA6NKF2 412 aa16.76■□□□□ 0.27
RAB11FIP3-205ENST00000450428 AQRO60306 1485 aaKnown RBP eCLIP16.76■□□□□ 0.271e-6■■□□□ 14.5
RAB11FIP3-205ENST00000450428 CCNB3Q8WWL7 1395 aa16.75■□□□□ 0.27
RAB11FIP3-205ENST00000450428 FBLN2P98095 1184 aa16.74■□□□□ 0.27
RAB11FIP3-205ENST00000450428 ERCC6Q03468 1493 aa16.72■□□□□ 0.27
RAB11FIP3-205ENST00000450428 PAK3O75914 559 aaPredicted RBP16.72■□□□□ 0.27
RAB11FIP3-205ENST00000450428 KIF21AQ7Z4S6 1674 aa16.71■□□□□ 0.27
RAB11FIP3-205ENST00000450428 FANCIQ9NVI1 1328 aa16.7■□□□□ 0.26
RAB11FIP3-205ENST00000450428 RTL5Q5HYW3 569 aaPredicted RBP16.7■□□□□ 0.26
RAB11FIP3-205ENST00000450428 IL27Q8NEV9 243 aa16.69■□□□□ 0.26
RAB11FIP3-205ENST00000450428 MRC2Q9UBG0 1479 aa16.68■□□□□ 0.26
RAB11FIP3-205ENST00000450428 NPM2Q86SE8 214 aaKnown RBP16.66■□□□□ 0.26
RAB11FIP3-205ENST00000450428 NOP58Q9Y2X3 529 aaKnown RBP16.66■□□□□ 0.26
RAB11FIP3-205ENST00000450428 MTUS2Q5JR59 1369 aa16.65■□□□□ 0.26
RAB11FIP3-205ENST00000450428 FAM9BQ8IZU0 186 aa16.65■□□□□ 0.26
RAB11FIP3-205ENST00000450428 CUL7Q14999 1698 aa16.64■□□□□ 0.26
RAB11FIP3-205ENST00000450428 PHLDB1Q86UU1 1377 aa16.64■□□□□ 0.25
RAB11FIP3-205ENST00000450428 LRRC9Q6ZRR7 1453 aa16.64■□□□□ 0.25
RAB11FIP3-205ENST00000450428 RRBP1Q9P2E9 1410 aaKnown RBP16.64■□□□□ 0.25
RAB11FIP3-205ENST00000450428 FMN1Q68DA7 1419 aa16.63■□□□□ 0.25
RAB11FIP3-205ENST00000450428 TIAM1Q13009 1591 aa16.62■□□□□ 0.25
RAB11FIP3-205ENST00000450428 PPP1R15AO75807 674 aaPredicted RBP16.62■□□□□ 0.25
RAB11FIP3-205ENST00000450428 EIF5BO60841 1220 aaKnown RBP16.61■□□□□ 0.25
RAB11FIP3-205ENST00000450428 CHMP7Q8WUX9 453 aaPredicted RBP16.61■□□□□ 0.25
RAB11FIP3-205ENST00000450428 PCF11O94913 1555 aaKnown RBP16.6■□□□□ 0.25
RAB11FIP3-205ENST00000450428 ZNF608Q9ULD9 1512 aaPredicted RBP16.6■□□□□ 0.25
RAB11FIP3-205ENST00000450428 RAB3GAP2Q9H2M9 1393 aa16.58■□□□□ 0.25
RAB11FIP3-205ENST00000450428 ABCA5Q8WWZ7 1642 aa16.58■□□□□ 0.25
RAB11FIP3-205ENST00000450428 CASKIN1Q8WXD9 1431 aa16.58■□□□□ 0.24
RAB11FIP3-205ENST00000450428 EFCAB5A4FU69 1503 aa16.57■□□□□ 0.24
RAB11FIP3-205ENST00000450428 LAS1LQ9Y4W2 734 aaKnown RBP16.56■□□□□ 0.24
RAB11FIP3-205ENST00000450428 GRIN2BQ13224 1484 aa16.56■□□□□ 0.24
RAB11FIP3-205ENST00000450428 PPP4R2Q9NY27 417 aa16.55■□□□□ 0.24
RAB11FIP3-205ENST00000450428 FYCO1Q9BQS8 1478 aa16.55■□□□□ 0.24
RAB11FIP3-205ENST00000450428 TARBP1Q13395 1621 aaKnown RBP16.55■□□□□ 0.24
RAB11FIP3-205ENST00000450428 CCER2I3L3R5 266 aa16.54■□□□□ 0.24
RAB11FIP3-205ENST00000450428 WDR97A6NE52 1622 aa16.53■□□□□ 0.24
RAB11FIP3-205ENST00000450428 IFT140Q96RY7 1462 aa16.53■□□□□ 0.24
RAB11FIP3-205ENST00000450428 MYT1LQ9UL68 1186 aa16.53■□□□□ 0.24
RAB11FIP3-205ENST00000450428 ANP32AP39687 249 aaKnown RBP16.51■□□□□ 0.23
RAB11FIP3-205ENST00000450428 ZBTB47Q9UFB7 747 aaPredicted RBP16.51■□□□□ 0.23
RAB11FIP3-205ENST00000450428 MAP3K1Q13233 1512 aa16.51■□□□□ 0.23
RAB11FIP3-205ENST00000450428 POLR3GLQ9BT43 218 aa16.51■□□□□ 0.23
RAB11FIP3-205ENST00000450428 CCDC184Q52MB2 194 aa16.5■□□□□ 0.23
RAB11FIP3-205ENST00000450428 CTTNBP2Q8WZ74 1663 aa16.49■□□□□ 0.23
RAB11FIP3-205ENST00000450428 CHIC2Q9UKJ5 165 aa16.48■□□□□ 0.23
RAB11FIP3-205ENST00000450428 SETD5Q9C0A6 1442 aa16.48■□□□□ 0.23
RAB11FIP3-205ENST00000450428 SNAPC4Q5SXM2 1469 aa16.47■□□□□ 0.23
RAB11FIP3-205ENST00000450428 WDR62O43379 1518 aa16.42■□□□□ 0.22
RAB11FIP3-205ENST00000450428 TONSLQ96HA7 1378 aa16.42■□□□□ 0.22
RAB11FIP3-205ENST00000450428 MRS2Q9HD23 443 aa16.42■□□□□ 0.22
RAB11FIP3-205ENST00000450428 IQGAP2Q13576 1575 aa16.42■□□□□ 0.22
RAB11FIP3-205ENST00000450428 RRP7BPQ9NSQ0 103 aa16.41■□□□□ 0.22
RAB11FIP3-205ENST00000450428 FGD6Q6ZV73 1430 aa16.41■□□□□ 0.22
RAB11FIP3-205ENST00000450428 NEFMP07197 916 aa16.4■□□□□ 0.22
RAB11FIP3-205ENST00000450428 ADAMTS12P58397 1594 aa16.4■□□□□ 0.22
RAB11FIP3-205ENST00000450428 PBRM1Q86U86 1689 aa16.4■□□□□ 0.22
RAB11FIP3-205ENST00000450428 NCOA2Q15596 1464 aa16.39■□□□□ 0.21
RAB11FIP3-205ENST00000450428 SAMD9Q5K651 1589 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms