RNA–Protein interactions for RNA: ENST00000450288.3

PDXDC1-203, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 5 BASIC

Gene PDXDC1, Length 4,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-203ENST00000450288 SENP3Q9H4L4 574 aaPredicted RBP11.88□□□□□ -0.51
PDXDC1-203ENST00000450288 JPH4Q96JJ6 628 aa11.88□□□□□ -0.51
PDXDC1-203ENST00000450288 YTHDC1Q96MU7 727 aaKnown RBP11.88□□□□□ -0.51
PDXDC1-203ENST00000450288 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.88□□□□□ -0.514e-7■■□□□ 12.8
PDXDC1-203ENST00000450288 GAPVD1Q14C86 1478 aa11.88□□□□□ -0.51
PDXDC1-203ENST00000450288 TOPBP1Q92547 1522 aa11.87□□□□□ -0.51
PDXDC1-203ENST00000450288 PEG3Q9GZU2 1588 aa11.86□□□□□ -0.51
PDXDC1-203ENST00000450288 POLA1P09884 1462 aaPredicted RBP11.86□□□□□ -0.51
PDXDC1-203ENST00000450288 CFDP1Q9UEE9 299 aaPredicted RBP11.81□□□□□ -0.52
PDXDC1-203ENST00000450288 CYB5RLQ6IPT4 315 aa11.8□□□□□ -0.52
PDXDC1-203ENST00000450288 MRC2Q9UBG0 1479 aa11.79□□□□□ -0.52
PDXDC1-203ENST00000450288 VPS8Q8N3P4 1428 aa11.78□□□□□ -0.52
PDXDC1-203ENST00000450288 URB2Q14146 1524 aaKnown RBP11.78□□□□□ -0.52
PDXDC1-203ENST00000450288 TSPY4P0CV99 314 aa11.77□□□□□ -0.52
PDXDC1-203ENST00000450288 TSPY10P0CW01 314 aa11.77□□□□□ -0.52
PDXDC1-203ENST00000450288 TOP2BQ02880 1626 aa11.77□□□□□ -0.53
PDXDC1-203ENST00000450288 ZNF608Q9ULD9 1512 aaPredicted RBP11.75□□□□□ -0.53
PDXDC1-203ENST00000450288 TRHP20396 242 aaPredicted RBP11.75□□□□□ -0.53
PDXDC1-203ENST00000450288 CHGAP10645 457 aaKnown RBP11.75□□□□□ -0.53
PDXDC1-203ENST00000450288 HIRIP3Q9BW71 556 aaPredicted RBP11.74□□□□□ -0.53
PDXDC1-203ENST00000450288 LAMC3Q9Y6N6 1575 aa11.74□□□□□ -0.53
PDXDC1-203ENST00000450288 OSCARQ8IYS5 282 aa11.73□□□□□ -0.53
PDXDC1-203ENST00000450288 FHAD1B1AJZ9 1412 aa11.72□□□□□ -0.53
PDXDC1-203ENST00000450288 SLC4A1APQ9BWU0 796 aaKnown RBP11.71□□□□□ -0.53
PDXDC1-203ENST00000450288 CARMIL2Q6F5E8 1435 aa11.71□□□□□ -0.53
PDXDC1-203ENST00000450288 DNMBPQ6XZF7 1577 aa11.71□□□□□ -0.54
PDXDC1-203ENST00000450288 GRIN2BQ13224 1484 aa11.69□□□□□ -0.54
PDXDC1-203ENST00000450288 SNAPC4Q5SXM2 1469 aa11.69□□□□□ -0.54
PDXDC1-203ENST00000450288 KDM2AQ9Y2K7 1162 aa11.68□□□□□ -0.54
PDXDC1-203ENST00000450288 CCNB3Q8WWL7 1395 aa11.67□□□□□ -0.54
PDXDC1-203ENST00000450288 SIN3AQ96ST3 1273 aa11.67□□□□□ -0.54
PDXDC1-203ENST00000450288 FOXD1Q16676 465 aa11.66□□□□□ -0.54
PDXDC1-203ENST00000450288 BCANQ96GW7 911 aa11.66□□□□□ -0.54
PDXDC1-203ENST00000450288 PTPRGP23470 1445 aa11.65□□□□□ -0.54
PDXDC1-203ENST00000450288 FMN1Q68DA7 1419 aa11.65□□□□□ -0.54
PDXDC1-203ENST00000450288 IFT140Q96RY7 1462 aa11.65□□□□□ -0.54
PDXDC1-203ENST00000450288 HNRNPMP52272 730 aaKnown RBP eCLIP11.64□□□□□ -0.55
PDXDC1-203ENST00000450288 RGL3Q3MIN7 710 aa11.64□□□□□ -0.55
PDXDC1-203ENST00000450288 PRXQ9BXM0 1461 aa11.64□□□□□ -0.55
PDXDC1-203ENST00000450288 ARAP1Q96P48 1450 aa11.64□□□□□ -0.55
PDXDC1-203ENST00000450288 MLECQ14165 292 aa11.64□□□□□ -0.55
PDXDC1-203ENST00000450288 DIEXFQ68CQ4 756 aaKnown RBP11.64□□□□□ -0.55
PDXDC1-203ENST00000450288 ESF1Q9H501 851 aaKnown RBP11.63□□□□□ -0.55
PDXDC1-203ENST00000450288 ZNF644Q9H582 1327 aaPredicted RBP11.62□□□□□ -0.55
PDXDC1-203ENST00000450288 ABCA10Q8WWZ4 1543 aa11.61□□□□□ -0.55
PDXDC1-203ENST00000450288 ARID4BQ4LE39 1312 aaPredicted RBP11.61□□□□□ -0.55
PDXDC1-203ENST00000450288 ARHGAP35Q9NRY4 1499 aa11.6□□□□□ -0.55
PDXDC1-203ENST00000450288 KIF21AQ7Z4S6 1674 aa11.6□□□□□ -0.55
PDXDC1-203ENST00000450288 KIF21BO75037 1637 aa11.6□□□□□ -0.55
PDXDC1-203ENST00000450288 PRG4Q92954 1404 aaPredicted RBP11.59□□□□□ -0.55
PDXDC1-203ENST00000450288 TONSLQ96HA7 1378 aa11.58□□□□□ -0.55
PDXDC1-203ENST00000450288 STAG3Q9UJ98 1225 aa11.58□□□□□ -0.56
PDXDC1-203ENST00000450288 PRDM2Q13029 1718 aa11.56□□□□□ -0.56
PDXDC1-203ENST00000450288 GGT6Q6P531 493 aa11.56□□□□□ -0.56
PDXDC1-203ENST00000450288 ZNF316A6NFI3 1004 aaPredicted RBP11.54□□□□□ -0.56
PDXDC1-203ENST00000450288 BIVM-ERCC5R4GMW8 1640 aa11.52□□□□□ -0.57
PDXDC1-203ENST00000450288 PHLDB1Q86UU1 1377 aa11.51□□□□□ -0.57
PDXDC1-203ENST00000450288 DDX10Q13206 875 aaKnown RBP11.51□□□□□ -0.57
PDXDC1-203ENST00000450288 EFCAB2Q5VUJ9 269 aa11.51□□□□□ -0.57
PDXDC1-203ENST00000450288 ERICH3Q5RHP9 1530 aa11.5□□□□□ -0.57
PDXDC1-203ENST00000450288 RAB3GAP2Q9H2M9 1393 aa11.49□□□□□ -0.57
PDXDC1-203ENST00000450288 FAM69CQ0P6D2 419 aa11.48□□□□□ -0.57
PDXDC1-203ENST00000450288 GRIN2AQ12879 1464 aa11.47□□□□□ -0.57
PDXDC1-203ENST00000450288 PLB1Q6P1J6 1458 aa11.46□□□□□ -0.57
PDXDC1-203ENST00000450288 CENPBP07199 599 aaPredicted RBP11.46□□□□□ -0.57
PDXDC1-203ENST00000450288 KIF3BO15066 747 aa11.46□□□□□ -0.58
PDXDC1-203ENST00000450288 PKD2Q13563 968 aa11.46□□□□□ -0.58
PDXDC1-203ENST00000450288 SYNJ2O15056 1496 aa11.45□□□□□ -0.58
PDXDC1-203ENST00000450288 AFAP1Q8N556 730 aa11.45□□□□□ -0.58
PDXDC1-203ENST00000450288 CCDC18Q5T9S5 1454 aa11.45□□□□□ -0.58
PDXDC1-203ENST00000450288 CDK13Q14004 1512 aaKnown RBP11.45□□□□□ -0.58
PDXDC1-203ENST00000450288 SENP3-EIF4A1A0A087X0R7 540 aa11.45□□□□□ -0.58
PDXDC1-203ENST00000450288 PLEKHG5O94827 1062 aa11.45□□□□□ -0.58
PDXDC1-203ENST00000450288 SETD5Q9C0A6 1442 aa11.44□□□□□ -0.58
PDXDC1-203ENST00000450288 KIAA0586Q9BVV6 1533 aa11.43□□□□□ -0.58
PDXDC1-203ENST00000450288 NUTM2DQ5VT03 806 aaPredicted RBP11.42□□□□□ -0.58
PDXDC1-203ENST00000450288 LRRC9Q6ZRR7 1453 aa11.42□□□□□ -0.58
PDXDC1-203ENST00000450288 SPAG9O60271 1321 aaKnown RBP11.42□□□□□ -0.58
PDXDC1-203ENST00000450288 CASKIN1Q8WXD9 1431 aa11.41□□□□□ -0.58
PDXDC1-203ENST00000450288 NUP155O75694 1391 aa11.41□□□□□ -0.58
PDXDC1-203ENST00000450288 MPHOSPH9Q99550 1183 aa11.41□□□□□ -0.58
PDXDC1-203ENST00000450288 IQGAP2Q13576 1575 aa11.4□□□□□ -0.58
PDXDC1-203ENST00000450288 DCAF11Q8TEB1 546 aa11.4□□□□□ -0.58
PDXDC1-203ENST00000450288 MAGI1Q96QZ7 1491 aaPredicted RBP11.39□□□□□ -0.59
PDXDC1-203ENST00000450288 NCOA2Q15596 1464 aa11.38□□□□□ -0.59
PDXDC1-203ENST00000450288 PPP1R15AO75807 674 aaPredicted RBP11.37□□□□□ -0.59
PDXDC1-203ENST00000450288 RAPGEF3O95398 923 aa11.37□□□□□ -0.59
PDXDC1-203ENST00000450288 EIF4G3O43432 1585 aaKnown RBP11.37□□□□□ -0.59
PDXDC1-203ENST00000450288 ANP32CO43423 234 aa11.37□□□□□ -0.59
PDXDC1-203ENST00000450288 FGD6Q6ZV73 1430 aa11.36□□□□□ -0.59
PDXDC1-203ENST00000450288 SAFB2Q14151 953 aaKnown RBP eCLIP11.35□□□□□ -0.59
PDXDC1-203ENST00000450288 CUL7Q14999 1698 aa11.35□□□□□ -0.59
PDXDC1-203ENST00000450288 ANKRD30AQ9BXX3 1397 aa11.35□□□□□ -0.59
PDXDC1-203ENST00000450288 PCF11O94913 1555 aaKnown RBP11.34□□□□□ -0.59
PDXDC1-203ENST00000450288 WDR62O43379 1518 aa11.34□□□□□ -0.59
PDXDC1-203ENST00000450288 MYOM3Q5VTT5 1437 aa11.34□□□□□ -0.59
PDXDC1-203ENST00000450288 SALL2Q9Y467 1007 aaPredicted RBP11.33□□□□□ -0.6
PDXDC1-203ENST00000450288 FYCO1Q9BQS8 1478 aa11.33□□□□□ -0.6
PDXDC1-203ENST00000450288 MIER1Q8N108 512 aa11.32□□□□□ -0.6
PDXDC1-203ENST00000450288 CARD11Q9BXL7 1154 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms