RNA–Protein interactions for RNA: ENST00000449537.1

AC004540.1-204, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 727 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-204ENST00000449537 MAPKBP1O60336 1514 aa23.33■■□□□ 1.32
AC004540.1-204ENST00000449537 FHAD1B1AJZ9 1412 aa23.33■■□□□ 1.32
AC004540.1-204ENST00000449537 DIP2BQ9P265 1576 aa23.32■■□□□ 1.32
AC004540.1-204ENST00000449537 TSPOAP1O95153 1857 aa23.26■■□□□ 1.31
AC004540.1-204ENST00000449537 WRNQ14191 1432 aaPredicted RBP eCLIP23.23■■□□□ 1.31
AC004540.1-204ENST00000449537 ADGRL1O94910 1474 aa23.2■■□□□ 1.3
AC004540.1-204ENST00000449537 ADCY10Q96PN6 1610 aa23.16■■□□□ 1.3
AC004540.1-204ENST00000449537 HECW2Q9P2P5 1572 aa23.16■■□□□ 1.3
AC004540.1-204ENST00000449537 FBXO41Q8TF61 875 aa23.14■■□□□ 1.29
AC004540.1-204ENST00000449537 ERICH3Q5RHP9 1530 aa23.13■■□□□ 1.29
AC004540.1-204ENST00000449537 RUSC2Q8N2Y8 1516 aa23.01■■□□□ 1.27
AC004540.1-204ENST00000449537 TOP2BQ02880 1626 aa22.94■■□□□ 1.26
AC004540.1-204ENST00000449537 COL17A1Q9UMD9 1497 aaPredicted RBP22.94■■□□□ 1.26
AC004540.1-204ENST00000449537 PTPRGP23470 1445 aa22.94■■□□□ 1.26
AC004540.1-204ENST00000449537 TTBK1Q5TCY1 1321 aaPredicted RBP22.93■■□□□ 1.26
AC004540.1-204ENST00000449537 PPRC1Q5VV67 1664 aaKnown RBP22.92■■□□□ 1.26
AC004540.1-204ENST00000449537 BIVM-ERCC5R4GMW8 1640 aa22.92■■□□□ 1.26
AC004540.1-204ENST00000449537 GLI2P10070 1586 aa22.92■■□□□ 1.26
AC004540.1-204ENST00000449537 PLB1Q6P1J6 1458 aa22.92■■□□□ 1.26
AC004540.1-204ENST00000449537 ASXL2Q76L83 1435 aa22.91■■□□□ 1.26
AC004540.1-204ENST00000449537 KIAA0586Q9BVV6 1533 aa22.91■■□□□ 1.26
AC004540.1-204ENST00000449537 ABCC2Q92887 1545 aa22.87■■□□□ 1.25
AC004540.1-204ENST00000449537 TEX14Q8IWB6 1497 aa22.8■■□□□ 1.24
AC004540.1-204ENST00000449537 TNIKQ9UKE5 1360 aa22.79■■□□□ 1.24
AC004540.1-204ENST00000449537 CARMIL2Q6F5E8 1435 aa22.75■■□□□ 1.23
AC004540.1-204ENST00000449537 LMTK3Q96Q04 1460 aa22.75■■□□□ 1.23
AC004540.1-204ENST00000449537 EPRSP07814 1512 aaKnown RBP22.74■■□□□ 1.23
AC004540.1-204ENST00000449537 MAP3K4Q9Y6R4 1608 aa22.72■■□□□ 1.23
AC004540.1-204ENST00000449537 UHRF1BP1LA0JNW5 1464 aa22.72■■□□□ 1.23
AC004540.1-204ENST00000449537 CUL7Q14999 1698 aa22.71■■□□□ 1.23
AC004540.1-204ENST00000449537 IGF1RP08069 1367 aa22.7■■□□□ 1.22
AC004540.1-204ENST00000449537 UACAQ9BZF9 1416 aa22.7■■□□□ 1.22
AC004540.1-204ENST00000449537 KDM5BQ9UGL1 1544 aa22.62■■□□□ 1.21
AC004540.1-204ENST00000449537 SUPT5HO00267 1087 aaKnown RBP22.59■■□□□ 1.21
AC004540.1-204ENST00000449537 SOCS7O14512 581 aa22.59■■□□□ 1.21
AC004540.1-204ENST00000449537 KIF27Q86VH2 1401 aa22.56■■□□□ 1.2
AC004540.1-204ENST00000449537 ILDR2Q71H61 639 aa22.54■■□□□ 1.2
AC004540.1-204ENST00000449537 CD109Q6YHK3 1445 aa22.54■■□□□ 1.2
AC004540.1-204ENST00000449537 CARMIL1Q5VZK9 1371 aa22.53■■□□□ 1.2
AC004540.1-204ENST00000449537 ZCCHC11Q5TAX3 1644 aaKnown RBP22.52■■□□□ 1.2
AC004540.1-204ENST00000449537 PTPRMP28827 1452 aa22.52■■□□□ 1.2
AC004540.1-204ENST00000449537 KIF21BO75037 1637 aa22.51■■□□□ 1.19
AC004540.1-204ENST00000449537 KCNH8Q96L42 1107 aa22.51■■□□□ 1.19
AC004540.1-204ENST00000449537 MAGI3Q5TCQ9 1506 aa22.51■■□□□ 1.19
AC004540.1-204ENST00000449537 WDR7Q9Y4E6 1490 aa22.5■■□□□ 1.19
AC004540.1-204ENST00000449537 IQGAP2Q13576 1575 aa22.49■■□□□ 1.19
AC004540.1-204ENST00000449537 DISP3Q9P2K9 1392 aa22.49■■□□□ 1.19
AC004540.1-204ENST00000449537 DISP1Q96F81 1524 aa22.47■■□□□ 1.19
AC004540.1-204ENST00000449537 CERKQ8TCT0 537 aa22.45■■□□□ 1.18
AC004540.1-204ENST00000449537 ADAMTSL3P82987 1691 aa22.41■■□□□ 1.18
AC004540.1-204ENST00000449537 PCF11O94913 1555 aaKnown RBP22.41■■□□□ 1.18
AC004540.1-204ENST00000449537 CFAP43Q8NDM7 1665 aa22.4■■□□□ 1.18
AC004540.1-204ENST00000449537 ARAP3Q8WWN8 1544 aa22.37■■□□□ 1.17
AC004540.1-204ENST00000449537 ARID4BQ4LE39 1312 aaPredicted RBP22.35■■□□□ 1.17
AC004540.1-204ENST00000449537 HSPA2P54652 639 aa22.35■■□□□ 1.17
AC004540.1-204ENST00000449537 UGGT2Q9NYU1 1516 aa22.33■■□□□ 1.17
AC004540.1-204ENST00000449537 RAPGEF3O95398 923 aa22.29■■□□□ 1.16
AC004540.1-204ENST00000449537 PHLDB1Q86UU1 1377 aa22.28■■□□□ 1.16
AC004540.1-204ENST00000449537 KIAA0556O60303 1618 aa22.28■■□□□ 1.16
AC004540.1-204ENST00000449537 BCORL1Q5H9F3 1711 aa22.26■■□□□ 1.15
AC004540.1-204ENST00000449537 MADDQ8WXG6 1647 aa22.24■■□□□ 1.15
AC004540.1-204ENST00000449537 PLPPR3Q6T4P5 718 aa22.23■■□□□ 1.15
AC004540.1-204ENST00000449537 RAPGEF2Q9Y4G8 1499 aa22.17■■□□□ 1.14
AC004540.1-204ENST00000449537 ABCA8O94911 1581 aa22.16■■□□□ 1.14
AC004540.1-204ENST00000449537 RIMS1Q86UR5 1692 aaKnown RBP22.15■■□□□ 1.14
AC004540.1-204ENST00000449537 FAM9AQ8IZU1 332 aaPredicted RBP22.13■■□□□ 1.13
AC004540.1-204ENST00000449537 ARID3CA6NKF2 412 aa22.12■■□□□ 1.13
AC004540.1-204ENST00000449537 GOLGA3Q08378 1498 aa22.11■■□□□ 1.13
AC004540.1-204ENST00000449537 NEO1Q92859 1461 aa22.1■■□□□ 1.13
AC004540.1-204ENST00000449537 SPATA31D1Q6ZQQ2 1576 aa22.1■■□□□ 1.13
AC004540.1-204ENST00000449537 DMRT2Q9Y5R5 561 aa22.08■■□□□ 1.13
AC004540.1-204ENST00000449537 ABCA9Q8IUA7 1624 aa22.06■■□□□ 1.12
AC004540.1-204ENST00000449537 POGZQ7Z3K3 1410 aa22.06■■□□□ 1.12
AC004540.1-204ENST00000449537 ATP10BO94823 1461 aa22.05■■□□□ 1.12
AC004540.1-204ENST00000449537 FRMPD1Q5SYB0 1578 aa22.03■■□□□ 1.12
AC004540.1-204ENST00000449537 MLECQ14165 292 aa22■■□□□ 1.11
AC004540.1-204ENST00000449537 YEATS2Q9ULM3 1422 aa21.99■■□□□ 1.11
AC004540.1-204ENST00000449537 FANCAO15360 1455 aa21.97■■□□□ 1.11
AC004540.1-204ENST00000449537 DENND4BO75064 1496 aaPredicted RBP21.97■■□□□ 1.11
AC004540.1-204ENST00000449537 ARHGEF40Q8TER5 1519 aa21.97■■□□□ 1.11
AC004540.1-204ENST00000449537 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.97■■□□□ 1.11
AC004540.1-204ENST00000449537 HNRNPUL2Q1KMD3 747 aaKnown RBP21.97■■□□□ 1.11
AC004540.1-204ENST00000449537 AKNAQ7Z591 1439 aa21.96■■□□□ 1.11
AC004540.1-204ENST00000449537 CTTNBP2Q8WZ74 1663 aa21.94■■□□□ 1.1
AC004540.1-204ENST00000449537 P3H3Q8IVL6 736 aa21.93■■□□□ 1.1
AC004540.1-204ENST00000449537 FHOD3Q2V2M9 1422 aa21.91■■□□□ 1.1
AC004540.1-204ENST00000449537 CEBPAP49715 358 aaPredicted RBP21.88■■□□□ 1.09
AC004540.1-204ENST00000449537 RICTORQ6R327 1708 aa21.87■■□□□ 1.09
AC004540.1-204ENST00000449537 STRCQ7RTU9 1775 aa21.87■■□□□ 1.09
AC004540.1-204ENST00000449537 FER1L4A9Z1Z3 1794 aa21.86■■□□□ 1.09
AC004540.1-204ENST00000449537 TTC37Q6PGP7 1564 aa21.86■■□□□ 1.09
AC004540.1-204ENST00000449537 PREX1Q8TCU6 1659 aa21.85■■□□□ 1.09
AC004540.1-204ENST00000449537 ZFYVE16Q7Z3T8 1539 aa21.84■■□□□ 1.09
AC004540.1-204ENST00000449537 PTPRTO14522 1441 aa21.82■■□□□ 1.08
AC004540.1-204ENST00000449537 EFCAB5A4FU69 1503 aa21.82■■□□□ 1.08
AC004540.1-204ENST00000449537 SIGLEC1Q9BZZ2 1709 aa21.82■■□□□ 1.08
AC004540.1-204ENST00000449537 MAGI2Q86UL8 1455 aa21.82■■□□□ 1.08
AC004540.1-204ENST00000449537 PLEKHD1A6NEE1 506 aa21.81■■□□□ 1.08
AC004540.1-204ENST00000449537 ZMYM4Q5VZL5 1548 aa21.8■■□□□ 1.08
AC004540.1-204ENST00000449537 UHRF1BP1Q6BDS2 1440 aa21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms