RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 ARHGAP35Q9NRY4 1499 aa19.8■□□□□ 0.76
SYNGAP1-204ENST00000449372 ABCA5Q8WWZ7 1642 aa19.8■□□□□ 0.76
SYNGAP1-204ENST00000449372 CARMIL1Q5VZK9 1371 aa19.8■□□□□ 0.76
SYNGAP1-204ENST00000449372 CUL7Q14999 1698 aa19.78■□□□□ 0.76
SYNGAP1-204ENST00000449372 ZNF316A6NFI3 1004 aaPredicted RBP19.78■□□□□ 0.76
SYNGAP1-204ENST00000449372 TARBP1Q13395 1621 aaKnown RBP19.75■□□□□ 0.75
SYNGAP1-204ENST00000449372 MIER1Q8N108 512 aa19.74■□□□□ 0.75
SYNGAP1-204ENST00000449372 SUPT16HQ9Y5B9 1047 aaKnown RBP19.72■□□□□ 0.75
SYNGAP1-204ENST00000449372 CTTNBP2Q8WZ74 1663 aa19.67■□□□□ 0.74
SYNGAP1-204ENST00000449372 CLSPNQ9HAW4 1339 aa19.67■□□□□ 0.74
SYNGAP1-204ENST00000449372 RANGAP1P46060 587 aaPredicted RBP19.63■□□□□ 0.73
SYNGAP1-204ENST00000449372 GAPVD1Q14C86 1478 aa19.61■□□□□ 0.73
SYNGAP1-204ENST00000449372 MRC2Q9UBG0 1479 aa19.6■□□□□ 0.73
SYNGAP1-204ENST00000449372 APLP2Q06481 763 aa19.6■□□□□ 0.73
SYNGAP1-204ENST00000449372 MAP3K1Q13233 1512 aa19.6■□□□□ 0.73
SYNGAP1-204ENST00000449372 PBRM1Q86U86 1689 aa19.58■□□□□ 0.72
SYNGAP1-204ENST00000449372 WDR62O43379 1518 aa19.57■□□□□ 0.72
SYNGAP1-204ENST00000449372 TDRD9Q8NDG6 1382 aaKnown RBP19.56■□□□□ 0.72
SYNGAP1-204ENST00000449372 EFCAB5A4FU69 1503 aa19.56■□□□□ 0.72
SYNGAP1-204ENST00000449372 KANK4Q5T7N3 995 aaPredicted RBP19.54■□□□□ 0.72
SYNGAP1-204ENST00000449372 TIAM1Q13009 1591 aa19.53■□□□□ 0.72
SYNGAP1-204ENST00000449372 CFAP43Q8NDM7 1665 aa19.52■□□□□ 0.72
SYNGAP1-204ENST00000449372 SAMD9Q5K651 1589 aa19.52■□□□□ 0.71
SYNGAP1-204ENST00000449372 PCF11O94913 1555 aaKnown RBP19.5■□□□□ 0.71
SYNGAP1-204ENST00000449372 RRBP1Q9P2E9 1410 aaKnown RBP19.5■□□□□ 0.71
SYNGAP1-204ENST00000449372 ADAMTS12P58397 1594 aa19.46■□□□□ 0.71
SYNGAP1-204ENST00000449372 AQRO60306 1485 aaKnown RBP eCLIP19.46■□□□□ 0.712e-6■■■■■ 32.4
SYNGAP1-204ENST00000449372 THOC2Q8NI27 1593 aaKnown RBP19.45■□□□□ 0.7
SYNGAP1-204ENST00000449372 FHAD1B1AJZ9 1412 aa19.45■□□□□ 0.7
SYNGAP1-204ENST00000449372 IFT140Q96RY7 1462 aa19.43■□□□□ 0.7
SYNGAP1-204ENST00000449372 FYCO1Q9BQS8 1478 aa19.42■□□□□ 0.7
SYNGAP1-204ENST00000449372 LRRC9Q6ZRR7 1453 aa19.41■□□□□ 0.7
SYNGAP1-204ENST00000449372 FHOD3Q2V2M9 1422 aa19.41■□□□□ 0.7
SYNGAP1-204ENST00000449372 SNAPC4Q5SXM2 1469 aa19.41■□□□□ 0.7
SYNGAP1-204ENST00000449372 LRRIQ1Q96JM4 1722 aa19.4■□□□□ 0.7
SYNGAP1-204ENST00000449372 CASKIN1Q8WXD9 1431 aa19.39■□□□□ 0.7
SYNGAP1-204ENST00000449372 ZNF608Q9ULD9 1512 aaPredicted RBP19.38■□□□□ 0.69
SYNGAP1-204ENST00000449372 GRIN2BQ13224 1484 aa19.37■□□□□ 0.69
SYNGAP1-204ENST00000449372 EIF4G3O43432 1585 aaKnown RBP19.34■□□□□ 0.69
SYNGAP1-204ENST00000449372 HNRNPUL2Q1KMD3 747 aaKnown RBP19.32■□□□□ 0.68
SYNGAP1-204ENST00000449372 FMN1Q68DA7 1419 aa19.32■□□□□ 0.68
SYNGAP1-204ENST00000449372 RBM19Q9Y4C8 960 aaKnown RBP19.31■□□□□ 0.68
SYNGAP1-204ENST00000449372 CCNB3Q8WWL7 1395 aa19.3■□□□□ 0.68
SYNGAP1-204ENST00000449372 IQGAP2Q13576 1575 aa19.3■□□□□ 0.68
SYNGAP1-204ENST00000449372 P3H3Q8IVL6 736 aa19.29■□□□□ 0.68
SYNGAP1-204ENST00000449372 ANO8Q9HCE9 1232 aaPredicted RBP19.27■□□□□ 0.67
SYNGAP1-204ENST00000449372 PHLDB1Q86UU1 1377 aa19.27■□□□□ 0.67
SYNGAP1-204ENST00000449372 UGGT2Q9NYU1 1516 aa19.25■□□□□ 0.67
SYNGAP1-204ENST00000449372 BCANQ96GW7 911 aa19.24■□□□□ 0.67
SYNGAP1-204ENST00000449372 ERCC6Q03468 1493 aa19.24■□□□□ 0.67
SYNGAP1-204ENST00000449372 GRIN2AQ12879 1464 aa19.18■□□□□ 0.66
SYNGAP1-204ENST00000449372 DHX57Q6P158 1386 aaKnown RBP19.18■□□□□ 0.66
SYNGAP1-204ENST00000449372 MAGI1Q96QZ7 1491 aaPredicted RBP19.18■□□□□ 0.66
SYNGAP1-204ENST00000449372 KIAA0586Q9BVV6 1533 aa19.17■□□□□ 0.66
SYNGAP1-204ENST00000449372 MSH5O43196 834 aa19.17■□□□□ 0.66
SYNGAP1-204ENST00000449372 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.16■□□□□ 0.664e-6■■■■□ 23.1
SYNGAP1-204ENST00000449372 ARHGEF11O15085 1522 aa19.16■□□□□ 0.66
SYNGAP1-204ENST00000449372 MAGI3Q5TCQ9 1506 aa19.15■□□□□ 0.66
SYNGAP1-204ENST00000449372 DISP1Q96F81 1524 aa19.15■□□□□ 0.66
SYNGAP1-204ENST00000449372 KIAA0556O60303 1618 aa19.14■□□□□ 0.65
SYNGAP1-204ENST00000449372 CEP170Q5SW79 1584 aa19.13■□□□□ 0.65
SYNGAP1-204ENST00000449372 HECW1Q76N89 1606 aa19.12■□□□□ 0.65
SYNGAP1-204ENST00000449372 EHBP1L1Q8N3D4 1523 aa19.11■□□□□ 0.65
SYNGAP1-204ENST00000449372 SYNJ2O15056 1496 aa19.11■□□□□ 0.65
SYNGAP1-204ENST00000449372 CCDC18Q5T9S5 1454 aa19.1■□□□□ 0.65
SYNGAP1-204ENST00000449372 FKBP8Q14318 412 aa19.09■□□□□ 0.65
SYNGAP1-204ENST00000449372 SUPT6HQ7KZ85 1726 aaKnown RBP19.09■□□□□ 0.65
SYNGAP1-204ENST00000449372 MYT1LQ9UL68 1186 aa19.09■□□□□ 0.65
SYNGAP1-204ENST00000449372 DEKP35659 375 aaKnown RBP19.06■□□□□ 0.64
SYNGAP1-204ENST00000449372 FGD6Q6ZV73 1430 aa19.06■□□□□ 0.64
SYNGAP1-204ENST00000449372 EPRSP07814 1512 aaKnown RBP19.06■□□□□ 0.64
SYNGAP1-204ENST00000449372 NCOA2Q15596 1464 aa19.05■□□□□ 0.64
SYNGAP1-204ENST00000449372 NUP160Q12769 1436 aa19.05■□□□□ 0.64
SYNGAP1-204ENST00000449372 RAB3GAP2Q9H2M9 1393 aa19.03■□□□□ 0.64
SYNGAP1-204ENST00000449372 MAPKBP1O60336 1514 aa19.02■□□□□ 0.64
SYNGAP1-204ENST00000449372 ATP1B4Q9UN42 357 aaPredicted RBP19.02■□□□□ 0.63
SYNGAP1-204ENST00000449372 SETD5Q9C0A6 1442 aa19.01■□□□□ 0.63
SYNGAP1-204ENST00000449372 MTUS2Q5JR59 1369 aa19.01■□□□□ 0.63
SYNGAP1-204ENST00000449372 MYOM3Q5VTT5 1437 aa19■□□□□ 0.63
SYNGAP1-204ENST00000449372 SALL2Q9Y467 1007 aaPredicted RBP18.99■□□□□ 0.63
SYNGAP1-204ENST00000449372 CDK13Q14004 1512 aaKnown RBP18.99■□□□□ 0.63
SYNGAP1-204ENST00000449372 RAPGEF6Q8TEU7 1601 aa18.99■□□□□ 0.63
SYNGAP1-204ENST00000449372 TCOF1Q13428 1488 aaKnown RBP18.97■□□□□ 0.63
SYNGAP1-204ENST00000449372 PTPN23Q9H3S7 1636 aa18.97■□□□□ 0.63
SYNGAP1-204ENST00000449372 NUP153P49790 1475 aaKnown RBP18.97■□□□□ 0.63
SYNGAP1-204ENST00000449372 PTPRKQ15262 1439 aa18.96■□□□□ 0.63
SYNGAP1-204ENST00000449372 FANCIQ9NVI1 1328 aa18.96■□□□□ 0.63
SYNGAP1-204ENST00000449372 ITGAEP38570 1179 aa18.94■□□□□ 0.62
SYNGAP1-204ENST00000449372 NEFLP07196 543 aa18.94■□□□□ 0.62
SYNGAP1-204ENST00000449372 FAM50AQ14320 339 aaKnown RBP18.92■□□□□ 0.62
SYNGAP1-204ENST00000449372 UBE2Q2Q8WVN8 375 aa18.91■□□□□ 0.62
SYNGAP1-204ENST00000449372 ERICH6BQ5W0A0 696 aa18.9■□□□□ 0.62
SYNGAP1-204ENST00000449372 CCDC136Q96JN2 1154 aa18.9■□□□□ 0.62
SYNGAP1-204ENST00000449372 CHMP7Q8WUX9 453 aaPredicted RBP18.89■□□□□ 0.61
SYNGAP1-204ENST00000449372 HFM1A2PYH4 1435 aa18.89■□□□□ 0.61
SYNGAP1-204ENST00000449372 SLC24A1O60721 1099 aa18.87■□□□□ 0.61
SYNGAP1-204ENST00000449372 MIA2Q96PC5 1412 aa18.86■□□□□ 0.61
SYNGAP1-204ENST00000449372 ADCY10Q96PN6 1610 aa18.86■□□□□ 0.61
SYNGAP1-204ENST00000449372 CHD1O14646 1710 aa18.85■□□□□ 0.61
SYNGAP1-204ENST00000449372 ABCA8O94911 1581 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms