RNA–Protein interactions for RNA: ENST00000449174.1

COPS7B-213, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3

Gene COPS7B, Length 668 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-213ENST00000449174 CUL7Q14999 1698 aa20.42■□□□□ 0.86
COPS7B-213ENST00000449174 IGF1RP08069 1367 aa20.36■□□□□ 0.85
COPS7B-213ENST00000449174 KIAA0586Q9BVV6 1533 aa20.36■□□□□ 0.85
COPS7B-213ENST00000449174 KIF13AQ9H1H9 1805 aa20.32■□□□□ 0.84
COPS7B-213ENST00000449174 MAPKBP1O60336 1514 aa20.29■□□□□ 0.84
COPS7B-213ENST00000449174 NPM1P06748 294 aaKnown RBP eCLIP20.29■□□□□ 0.84
COPS7B-213ENST00000449174 CARMIL1Q5VZK9 1371 aa20.25■□□□□ 0.83
COPS7B-213ENST00000449174 ADCY10Q96PN6 1610 aa20.25■□□□□ 0.83
COPS7B-213ENST00000449174 AEBP2Q6ZN18 517 aaPredicted RBP20.25■□□□□ 0.83
COPS7B-213ENST00000449174 ABCC10Q5T3U5 1492 aa20.24■□□□□ 0.83
COPS7B-213ENST00000449174 DIP2BQ9P265 1576 aa20.19■□□□□ 0.82
COPS7B-213ENST00000449174 CARMIL2Q6F5E8 1435 aa20.19■□□□□ 0.82
COPS7B-213ENST00000449174 FAM69CQ0P6D2 419 aa20.18■□□□□ 0.82
COPS7B-213ENST00000449174 IQGAP2Q13576 1575 aa20.17■□□□□ 0.82
COPS7B-213ENST00000449174 PTPRGP23470 1445 aa20.16■□□□□ 0.82
COPS7B-213ENST00000449174 TNIKQ9UKE5 1360 aa20.13■□□□□ 0.81
COPS7B-213ENST00000449174 ABCC2Q92887 1545 aa20.08■□□□□ 0.81
COPS7B-213ENST00000449174 RAPGEF2Q9Y4G8 1499 aa20.08■□□□□ 0.81
COPS7B-213ENST00000449174 UHRF1BP1LA0JNW5 1464 aa20.06■□□□□ 0.8
COPS7B-213ENST00000449174 KDM6BO15054 1643 aa20.04■□□□□ 0.8
COPS7B-213ENST00000449174 DISP1Q96F81 1524 aa20.03■□□□□ 0.8
COPS7B-213ENST00000449174 UGGT2Q9NYU1 1516 aa20.03■□□□□ 0.8
COPS7B-213ENST00000449174 UACAQ9BZF9 1416 aa20.02■□□□□ 0.8
COPS7B-213ENST00000449174 PLB1Q6P1J6 1458 aa20.02■□□□□ 0.8
COPS7B-213ENST00000449174 TTBK1Q5TCY1 1321 aaPredicted RBP20■□□□□ 0.79
COPS7B-213ENST00000449174 GLI2P10070 1586 aa20■□□□□ 0.79
COPS7B-213ENST00000449174 TSPOAP1O95153 1857 aa19.99■□□□□ 0.79
COPS7B-213ENST00000449174 ASXL2Q76L83 1435 aa19.99■□□□□ 0.79
COPS7B-213ENST00000449174 KIAA0556O60303 1618 aa19.97■□□□□ 0.79
COPS7B-213ENST00000449174 KDM5BQ9UGL1 1544 aa19.96■□□□□ 0.79
COPS7B-213ENST00000449174 CTTNBP2Q8WZ74 1663 aa19.94■□□□□ 0.78
COPS7B-213ENST00000449174 GOLGA3Q08378 1498 aa19.9■□□□□ 0.78
COPS7B-213ENST00000449174 ZCCHC11Q5TAX3 1644 aaKnown RBP19.9■□□□□ 0.78
COPS7B-213ENST00000449174 PPRC1Q5VV67 1664 aaKnown RBP19.89■□□□□ 0.77
COPS7B-213ENST00000449174 EPRSP07814 1512 aaKnown RBP19.88■□□□□ 0.77
COPS7B-213ENST00000449174 MAP3K4Q9Y6R4 1608 aa19.87■□□□□ 0.77
COPS7B-213ENST00000449174 TEX14Q8IWB6 1497 aa19.86■□□□□ 0.77
COPS7B-213ENST00000449174 PRXQ9BXM0 1461 aa19.86■□□□□ 0.77
COPS7B-213ENST00000449174 WDR7Q9Y4E6 1490 aa19.81■□□□□ 0.76
COPS7B-213ENST00000449174 ABCA8O94911 1581 aa19.78■□□□□ 0.76
COPS7B-213ENST00000449174 KDM4FA0A1W2PPD8 638 aa19.78■□□□□ 0.76
COPS7B-213ENST00000449174 FAM9AQ8IZU1 332 aaPredicted RBP19.76■□□□□ 0.75
COPS7B-213ENST00000449174 CFAP43Q8NDM7 1665 aa19.73■□□□□ 0.75
COPS7B-213ENST00000449174 COL17A1Q9UMD9 1497 aaPredicted RBP19.72■□□□□ 0.75
COPS7B-213ENST00000449174 MAGI3Q5TCQ9 1506 aa19.71■□□□□ 0.75
COPS7B-213ENST00000449174 CD109Q6YHK3 1445 aa19.68■□□□□ 0.74
COPS7B-213ENST00000449174 EEA1Q15075 1411 aa19.67■□□□□ 0.74
COPS7B-213ENST00000449174 ADGRL1O94910 1474 aa19.67■□□□□ 0.74
COPS7B-213ENST00000449174 CSRNP3Q8WYN3 585 aa19.66■□□□□ 0.74
COPS7B-213ENST00000449174 SAMD9Q5K651 1589 aa19.65■□□□□ 0.74
COPS7B-213ENST00000449174 KCNH8Q96L42 1107 aa19.63■□□□□ 0.73
COPS7B-213ENST00000449174 ATP10BO94823 1461 aa19.6■□□□□ 0.73
COPS7B-213ENST00000449174 RAPGEF6Q8TEU7 1601 aa19.58■□□□□ 0.72
COPS7B-213ENST00000449174 P3H3Q8IVL6 736 aa19.57■□□□□ 0.72
COPS7B-213ENST00000449174 PHLDB1Q86UU1 1377 aa19.56■□□□□ 0.72
COPS7B-213ENST00000449174 ARAP3Q8WWN8 1544 aa19.56■□□□□ 0.72
COPS7B-213ENST00000449174 ABCA9Q8IUA7 1624 aa19.55■□□□□ 0.72
COPS7B-213ENST00000449174 ARID3CA6NKF2 412 aa19.49■□□□□ 0.71
COPS7B-213ENST00000449174 KIF21BO75037 1637 aa19.48■□□□□ 0.71
COPS7B-213ENST00000449174 EFCAB5A4FU69 1503 aa19.48■□□□□ 0.71
COPS7B-213ENST00000449174 NUP153P49790 1475 aaKnown RBP19.48■□□□□ 0.71
COPS7B-213ENST00000449174 NEO1Q92859 1461 aa19.48■□□□□ 0.71
COPS7B-213ENST00000449174 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.46■□□□□ 0.71
COPS7B-213ENST00000449174 HNRNPUL2Q1KMD3 747 aaKnown RBP19.46■□□□□ 0.71
COPS7B-213ENST00000449174 FHOD3Q2V2M9 1422 aa19.44■□□□□ 0.7
COPS7B-213ENST00000449174 HECW2Q9P2P5 1572 aa19.41■□□□□ 0.7
COPS7B-213ENST00000449174 PLEKHD1A6NEE1 506 aa19.39■□□□□ 0.69
COPS7B-213ENST00000449174 RANGAP1P46060 587 aaPredicted RBP19.39■□□□□ 0.69
COPS7B-213ENST00000449174 CFAP74Q9C0B2 1584 aa19.37■□□□□ 0.69
COPS7B-213ENST00000449174 RAPGEF3O95398 923 aa19.34■□□□□ 0.69
COPS7B-213ENST00000449174 FRMPD1Q5SYB0 1578 aa19.34■□□□□ 0.69
COPS7B-213ENST00000449174 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.32■□□□□ 0.68
COPS7B-213ENST00000449174 ADAMTSL3P82987 1691 aa19.32■□□□□ 0.68
COPS7B-213ENST00000449174 FANCAO15360 1455 aa19.3■□□□□ 0.68
COPS7B-213ENST00000449174 DENND4BO75064 1496 aaPredicted RBP19.3■□□□□ 0.68
COPS7B-213ENST00000449174 FMN1Q68DA7 1419 aa19.3■□□□□ 0.68
COPS7B-213ENST00000449174 AKNAQ7Z591 1439 aa19.29■□□□□ 0.68
COPS7B-213ENST00000449174 ARHGEF40Q8TER5 1519 aa19.29■□□□□ 0.68
COPS7B-213ENST00000449174 RICTORQ6R327 1708 aa19.28■□□□□ 0.68
COPS7B-213ENST00000449174 BCORL1Q5H9F3 1711 aa19.28■□□□□ 0.68
COPS7B-213ENST00000449174 TTC37Q6PGP7 1564 aa19.27■□□□□ 0.68
COPS7B-213ENST00000449174 HECW1Q76N89 1606 aa19.27■□□□□ 0.68
COPS7B-213ENST00000449174 PTPRMP28827 1452 aa19.27■□□□□ 0.67
COPS7B-213ENST00000449174 UBTFP17480 764 aaKnown RBP19.26■□□□□ 0.67
COPS7B-213ENST00000449174 CDK13Q14004 1512 aaKnown RBP19.25■□□□□ 0.67
COPS7B-213ENST00000449174 ZMYM4Q5VZL5 1548 aa19.25■□□□□ 0.67
COPS7B-213ENST00000449174 ARID4BQ4LE39 1312 aaPredicted RBP19.23■□□□□ 0.67
COPS7B-213ENST00000449174 MAGI2Q86UL8 1455 aa19.22■□□□□ 0.67
COPS7B-213ENST00000449174 ILDR1Q86SU0 546 aaPredicted RBP19.22■□□□□ 0.67
COPS7B-213ENST00000449174 ARHGAP35Q9NRY4 1499 aa19.22■□□□□ 0.67
COPS7B-213ENST00000449174 PLCH2O75038 1416 aa19.21■□□□□ 0.67
COPS7B-213ENST00000449174 CDK11AQ9UQ88 783 aaPredicted RBP19.21■□□□□ 0.67
COPS7B-213ENST00000449174 MADDQ8WXG6 1647 aa19.21■□□□□ 0.67
COPS7B-213ENST00000449174 POGZQ7Z3K3 1410 aa19.2■□□□□ 0.66
COPS7B-213ENST00000449174 ZFYVE16Q7Z3T8 1539 aa19.2■□□□□ 0.66
COPS7B-213ENST00000449174 CHIC1Q5VXU3 224 aa19.19■□□□□ 0.66
COPS7B-213ENST00000449174 MYO5CQ9NQX4 1742 aa19.17■□□□□ 0.66
COPS7B-213ENST00000449174 KIF14Q15058 1648 aa19.16■□□□□ 0.66
COPS7B-213ENST00000449174 ATP1B4Q9UN42 357 aaPredicted RBP19.15■□□□□ 0.66
COPS7B-213ENST00000449174 SCAPERQ9BY12 1400 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms