RNA–Protein interactions for RNA: ENST00000449116.6

SHANK2-210, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 939 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-210ENST00000449116 LOC105371045A0A1W2PR82 267 aa23.81■■□□□ 1.4
SHANK2-210ENST00000449116 OSCARQ8IYS5 282 aa23.77■■□□□ 1.4
SHANK2-210ENST00000449116 KIAA0586Q9BVV6 1533 aa23.75■■□□□ 1.39
SHANK2-210ENST00000449116 CTTNBP2Q8WZ74 1663 aa23.74■■□□□ 1.39
SHANK2-210ENST00000449116 TNIKQ9UKE5 1360 aa23.74■■□□□ 1.39
SHANK2-210ENST00000449116 CLASP1Q7Z460 1538 aa23.7■■□□□ 1.38
SHANK2-210ENST00000449116 IQGAP2Q13576 1575 aa23.69■■□□□ 1.38
SHANK2-210ENST00000449116 JPH4Q96JJ6 628 aa23.6■■□□□ 1.37
SHANK2-210ENST00000449116 UGGT2Q9NYU1 1516 aa23.59■■□□□ 1.37
SHANK2-210ENST00000449116 SHROOM2Q13796 1616 aa23.59■■□□□ 1.37
SHANK2-210ENST00000449116 RANGAP1P46060 587 aaPredicted RBP23.56■■□□□ 1.36
SHANK2-210ENST00000449116 CEP162Q5TB80 1403 aa23.54■■□□□ 1.36
SHANK2-210ENST00000449116 CLIP1P30622 1438 aa23.51■■□□□ 1.35
SHANK2-210ENST00000449116 PRG4Q92954 1404 aaPredicted RBP23.51■■□□□ 1.35
SHANK2-210ENST00000449116 EFCAB5A4FU69 1503 aa23.5■■□□□ 1.35
SHANK2-210ENST00000449116 DISP1Q96F81 1524 aa23.49■■□□□ 1.35
SHANK2-210ENST00000449116 SAMD9Q5K651 1589 aa23.49■■□□□ 1.35
SHANK2-210ENST00000449116 CARMIL2Q6F5E8 1435 aa23.49■■□□□ 1.35
SHANK2-210ENST00000449116 ARHGAP35Q9NRY4 1499 aa23.47■■□□□ 1.35
SHANK2-210ENST00000449116 KIAA0556O60303 1618 aa23.47■■□□□ 1.35
SHANK2-210ENST00000449116 ERCC6L2Q5T890 1561 aa23.42■■□□□ 1.34
SHANK2-210ENST00000449116 P3H3Q8IVL6 736 aa23.41■■□□□ 1.34
SHANK2-210ENST00000449116 FHOD3Q2V2M9 1422 aa23.39■■□□□ 1.33
SHANK2-210ENST00000449116 ARHGEF11O15085 1522 aa23.38■■□□□ 1.33
SHANK2-210ENST00000449116 ARAP1Q96P48 1450 aa23.36■■□□□ 1.33
SHANK2-210ENST00000449116 PTPRGP23470 1445 aa23.31■■□□□ 1.32
SHANK2-210ENST00000449116 RIMBP3CA6NJZ7 1639 aa23.3■■□□□ 1.32
SHANK2-210ENST00000449116 RIMBP3BA6NNM3 1639 aa23.3■■□□□ 1.32
SHANK2-210ENST00000449116 RIMBP3Q9UFD9 1639 aa23.3■■□□□ 1.32
SHANK2-210ENST00000449116 TTBK1Q5TCY1 1321 aaPredicted RBP23.29■■□□□ 1.32
SHANK2-210ENST00000449116 FMN1Q68DA7 1419 aa23.28■■□□□ 1.32
SHANK2-210ENST00000449116 VPS8Q8N3P4 1428 aa23.23■■□□□ 1.31
SHANK2-210ENST00000449116 PLB1Q6P1J6 1458 aa23.18■■□□□ 1.3
SHANK2-210ENST00000449116 ABCA8O94911 1581 aa23.18■■□□□ 1.3
SHANK2-210ENST00000449116 UACAQ9BZF9 1416 aa23.17■■□□□ 1.3
SHANK2-210ENST00000449116 CASKIN1Q8WXD9 1431 aa23.16■■□□□ 1.3
SHANK2-210ENST00000449116 RAPGEF6Q8TEU7 1601 aa23.15■■□□□ 1.3
SHANK2-210ENST00000449116 PCF11O94913 1555 aaKnown RBP23.14■■□□□ 1.3
SHANK2-210ENST00000449116 FYCO1Q9BQS8 1478 aa23.13■■□□□ 1.29
SHANK2-210ENST00000449116 CYB5RLQ6IPT4 315 aa23.13■■□□□ 1.29
SHANK2-210ENST00000449116 ABCC2Q92887 1545 aa23.13■■□□□ 1.29
SHANK2-210ENST00000449116 UHRF1BP1LA0JNW5 1464 aa23.11■■□□□ 1.29
SHANK2-210ENST00000449116 HECW1Q76N89 1606 aa23.11■■□□□ 1.29
SHANK2-210ENST00000449116 ATP1B4Q9UN42 357 aaPredicted RBP23.09■■□□□ 1.29
SHANK2-210ENST00000449116 NUP153P49790 1475 aaKnown RBP23.08■■□□□ 1.29
SHANK2-210ENST00000449116 ADCY10Q96PN6 1610 aa23.07■■□□□ 1.28
SHANK2-210ENST00000449116 EPRSP07814 1512 aaKnown RBP23.03■■□□□ 1.28
SHANK2-210ENST00000449116 CCDC18Q5T9S5 1454 aa23.01■■□□□ 1.27
SHANK2-210ENST00000449116 KDM5BQ9UGL1 1544 aa23■■□□□ 1.27
SHANK2-210ENST00000449116 ARID3CA6NKF2 412 aa23■■□□□ 1.27
SHANK2-210ENST00000449116 ATP10BO94823 1461 aa22.98■■□□□ 1.27
SHANK2-210ENST00000449116 LRRIQ1Q96JM4 1722 aa22.98■■□□□ 1.27
SHANK2-210ENST00000449116 CDK13Q14004 1512 aaKnown RBP22.98■■□□□ 1.27
SHANK2-210ENST00000449116 APLP2Q06481 763 aa22.97■■□□□ 1.27
SHANK2-210ENST00000449116 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.95■■□□□ 1.26
SHANK2-210ENST00000449116 NPM1P06748 294 aaKnown RBP eCLIP22.95■■□□□ 1.26
SHANK2-210ENST00000449116 MAP3K1Q13233 1512 aa22.95■■□□□ 1.26
SHANK2-210ENST00000449116 HNRNPUL2Q1KMD3 747 aaKnown RBP22.95■■□□□ 1.26
SHANK2-210ENST00000449116 ZCCHC11Q5TAX3 1644 aaKnown RBP22.95■■□□□ 1.26
SHANK2-210ENST00000449116 TIAM1Q13009 1591 aa22.93■■□□□ 1.26
SHANK2-210ENST00000449116 CFAP43Q8NDM7 1665 aa22.92■■□□□ 1.26
SHANK2-210ENST00000449116 CDK11AQ9UQ88 783 aaPredicted RBP22.89■■□□□ 1.25
SHANK2-210ENST00000449116 PLEKHD1A6NEE1 506 aa22.85■■□□□ 1.25
SHANK2-210ENST00000449116 LRRC9Q6ZRR7 1453 aa22.84■■□□□ 1.25
SHANK2-210ENST00000449116 ASXL2Q76L83 1435 aa22.82■■□□□ 1.24
SHANK2-210ENST00000449116 MAPKBP1O60336 1514 aa22.82■■□□□ 1.24
SHANK2-210ENST00000449116 MAGI3Q5TCQ9 1506 aa22.82■■□□□ 1.24
SHANK2-210ENST00000449116 MTUS2Q5JR59 1369 aa22.82■■□□□ 1.24
SHANK2-210ENST00000449116 TROQ12816 1431 aaPredicted RBP22.82■■□□□ 1.24
SHANK2-210ENST00000449116 KANK4Q5T7N3 995 aaPredicted RBP22.81■■□□□ 1.24
SHANK2-210ENST00000449116 EHBP1L1Q8N3D4 1523 aa22.81■■□□□ 1.24
SHANK2-210ENST00000449116 WDR7Q9Y4E6 1490 aa22.8■■□□□ 1.24
SHANK2-210ENST00000449116 PPARGC1BQ86YN6 1023 aaKnown RBP22.72■■□□□ 1.23
SHANK2-210ENST00000449116 KCNH8Q96L42 1107 aa22.72■■□□□ 1.23
SHANK2-210ENST00000449116 KIF14Q15058 1648 aa22.71■■□□□ 1.23
SHANK2-210ENST00000449116 SUPT6HQ7KZ85 1726 aaKnown RBP22.7■■□□□ 1.22
SHANK2-210ENST00000449116 NCOA2Q15596 1464 aa22.67■■□□□ 1.22
SHANK2-210ENST00000449116 ABCC10Q5T3U5 1492 aa22.66■■□□□ 1.22
SHANK2-210ENST00000449116 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.64■■□□□ 1.21
SHANK2-210ENST00000449116 DIP2BQ9P265 1576 aa22.63■■□□□ 1.21
SHANK2-210ENST00000449116 GLI2P10070 1586 aa22.62■■□□□ 1.21
SHANK2-210ENST00000449116 TTC37Q6PGP7 1564 aa22.61■■□□□ 1.21
SHANK2-210ENST00000449116 ABCA9Q8IUA7 1624 aa22.6■■□□□ 1.21
SHANK2-210ENST00000449116 FAM69CQ0P6D2 419 aa22.59■■□□□ 1.21
SHANK2-210ENST00000449116 CCNB3Q8WWL7 1395 aa22.59■■□□□ 1.21
SHANK2-210ENST00000449116 PHLDB1Q86UU1 1377 aa22.58■■□□□ 1.21
SHANK2-210ENST00000449116 GPATCH8Q9UKJ3 1502 aaKnown RBP22.56■■□□□ 1.2
SHANK2-210ENST00000449116 MYOM3Q5VTT5 1437 aa22.55■■□□□ 1.2
SHANK2-210ENST00000449116 CD109Q6YHK3 1445 aa22.53■■□□□ 1.2
SHANK2-210ENST00000449116 KIF13AQ9H1H9 1805 aa22.52■■□□□ 1.2
SHANK2-210ENST00000449116 ITSN2Q9NZM3 1697 aa22.52■■□□□ 1.2
SHANK2-210ENST00000449116 MYO5CQ9NQX4 1742 aa22.52■■□□□ 1.2
SHANK2-210ENST00000449116 PLCH2O75038 1416 aa22.52■■□□□ 1.2
SHANK2-210ENST00000449116 MAP3K4Q9Y6R4 1608 aa22.52■■□□□ 1.2
SHANK2-210ENST00000449116 CDC42BPAQ5VT25 1732 aa22.51■■□□□ 1.19
SHANK2-210ENST00000449116 PREX2Q70Z35 1606 aa22.51■■□□□ 1.19
SHANK2-210ENST00000449116 ARAP3Q8WWN8 1544 aa22.5■■□□□ 1.19
SHANK2-210ENST00000449116 CFDP1Q9UEE9 299 aaPredicted RBP22.49■■□□□ 1.19
SHANK2-210ENST00000449116 MIA2Q96PC5 1412 aa22.48■■□□□ 1.19
SHANK2-210ENST00000449116 TRHP20396 242 aaPredicted RBP22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms