RNA–Protein interactions for RNA: ENST00000448872.6

RCL1-208, Transcript of RNA terminal phosphate cyclase like 1, humanhuman

TSL 1 (best) BASIC

Gene RCL1, Length 1,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1-208ENST00000448872 LOC105371045A0A1W2PR82 267 aa19.41■□□□□ 0.7
RCL1-208ENST00000448872 GOLGA3Q08378 1498 aa19.4■□□□□ 0.7
RCL1-208ENST00000448872 SENP3Q9H4L4 574 aaPredicted RBP19.4■□□□□ 0.7
RCL1-208ENST00000448872 UBTFP17480 764 aaKnown RBP19.39■□□□□ 0.69
RCL1-208ENST00000448872 CLASP1Q7Z460 1538 aa19.38■□□□□ 0.69
RCL1-208ENST00000448872 KIAA0586Q9BVV6 1533 aa19.37■□□□□ 0.69
RCL1-208ENST00000448872 JPH4Q96JJ6 628 aa19.33■□□□□ 0.68
RCL1-208ENST00000448872 RANGAP1P46060 587 aaPredicted RBP19.32■□□□□ 0.68
RCL1-208ENST00000448872 DNAJC5Q9H3Z4 198 aa19.28■□□□□ 0.68
RCL1-208ENST00000448872 IQGAP2Q13576 1575 aa19.27■□□□□ 0.68
RCL1-208ENST00000448872 PRG4Q92954 1404 aaPredicted RBP19.25■□□□□ 0.67
RCL1-208ENST00000448872 TNIKQ9UKE5 1360 aa19.25■□□□□ 0.67
RCL1-208ENST00000448872 ERCC6L2Q5T890 1561 aa19.22■□□□□ 0.67
RCL1-208ENST00000448872 SHROOM2Q13796 1616 aa19.21■□□□□ 0.67
RCL1-208ENST00000448872 CTTNBP2Q8WZ74 1663 aa19.2■□□□□ 0.66
RCL1-208ENST00000448872 UGGT2Q9NYU1 1516 aa19.19■□□□□ 0.66
RCL1-208ENST00000448872 P3H3Q8IVL6 736 aa19.19■□□□□ 0.66
RCL1-208ENST00000448872 ARHGEF11O15085 1522 aa19.18■□□□□ 0.66
RCL1-208ENST00000448872 DISP1Q96F81 1524 aa19.18■□□□□ 0.66
RCL1-208ENST00000448872 TTBK1Q5TCY1 1321 aaPredicted RBP19.16■□□□□ 0.66
RCL1-208ENST00000448872 CARMIL2Q6F5E8 1435 aa19.13■□□□□ 0.65
RCL1-208ENST00000448872 CEP162Q5TB80 1403 aa19.11■□□□□ 0.65
RCL1-208ENST00000448872 RIMBP3CA6NJZ7 1639 aa19.11■□□□□ 0.65
RCL1-208ENST00000448872 RIMBP3BA6NNM3 1639 aa19.11■□□□□ 0.65
RCL1-208ENST00000448872 RIMBP3Q9UFD9 1639 aa19.11■□□□□ 0.65
RCL1-208ENST00000448872 KIAA0556O60303 1618 aa19.1■□□□□ 0.65
RCL1-208ENST00000448872 ARHGAP35Q9NRY4 1499 aa19.1■□□□□ 0.65
RCL1-208ENST00000448872 CLIP1P30622 1438 aa19.1■□□□□ 0.65
RCL1-208ENST00000448872 FHOD3Q2V2M9 1422 aa19.1■□□□□ 0.65
RCL1-208ENST00000448872 ARAP1Q96P48 1450 aa19.08■□□□□ 0.65
RCL1-208ENST00000448872 SAMD9Q5K651 1589 aa19.08■□□□□ 0.64
RCL1-208ENST00000448872 CYB5RLQ6IPT4 315 aa19.07■□□□□ 0.64
RCL1-208ENST00000448872 PTPRGP23470 1445 aa19.06■□□□□ 0.64
RCL1-208ENST00000448872 EFCAB5A4FU69 1503 aa19.04■□□□□ 0.64
RCL1-208ENST00000448872 PLB1Q6P1J6 1458 aa18.96■□□□□ 0.63
RCL1-208ENST00000448872 UACAQ9BZF9 1416 aa18.93■□□□□ 0.62
RCL1-208ENST00000448872 ARID3CA6NKF2 412 aa18.91■□□□□ 0.62
RCL1-208ENST00000448872 PLPPR3Q6T4P5 718 aa18.9■□□□□ 0.62
RCL1-208ENST00000448872 FMN1Q68DA7 1419 aa18.9■□□□□ 0.62
RCL1-208ENST00000448872 ABCA8O94911 1581 aa18.88■□□□□ 0.61
RCL1-208ENST00000448872 ATP1B4Q9UN42 357 aaPredicted RBP18.88■□□□□ 0.61
RCL1-208ENST00000448872 ADCY10Q96PN6 1610 aa18.85■□□□□ 0.61
RCL1-208ENST00000448872 ABCC2Q92887 1545 aa18.85■□□□□ 0.61
RCL1-208ENST00000448872 UHRF1BP1LA0JNW5 1464 aa18.84■□□□□ 0.61
RCL1-208ENST00000448872 NUP153P49790 1475 aaKnown RBP18.83■□□□□ 0.6
RCL1-208ENST00000448872 VPS8Q8N3P4 1428 aa18.83■□□□□ 0.6
RCL1-208ENST00000448872 CASKIN1Q8WXD9 1431 aa18.82■□□□□ 0.6
RCL1-208ENST00000448872 RAPGEF6Q8TEU7 1601 aa18.81■□□□□ 0.6
RCL1-208ENST00000448872 PCF11O94913 1555 aaKnown RBP18.81■□□□□ 0.6
RCL1-208ENST00000448872 ATP10BO94823 1461 aa18.78■□□□□ 0.6
RCL1-208ENST00000448872 NPM1P06748 294 aaKnown RBP eCLIP18.77■□□□□ 0.6
RCL1-208ENST00000448872 KDM5BQ9UGL1 1544 aa18.77■□□□□ 0.6
RCL1-208ENST00000448872 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.77■□□□□ 0.59
RCL1-208ENST00000448872 HNRNPUL2Q1KMD3 747 aaKnown RBP18.77■□□□□ 0.59
RCL1-208ENST00000448872 FYCO1Q9BQS8 1478 aa18.76■□□□□ 0.59
RCL1-208ENST00000448872 CDK13Q14004 1512 aaKnown RBP18.75■□□□□ 0.59
RCL1-208ENST00000448872 EPRSP07814 1512 aaKnown RBP18.74■□□□□ 0.59
RCL1-208ENST00000448872 HECW1Q76N89 1606 aa18.73■□□□□ 0.59
RCL1-208ENST00000448872 ZCCHC11Q5TAX3 1644 aaKnown RBP18.69■□□□□ 0.58
RCL1-208ENST00000448872 ASXL2Q76L83 1435 aa18.69■□□□□ 0.58
RCL1-208ENST00000448872 CCDC18Q5T9S5 1454 aa18.66■□□□□ 0.58
RCL1-208ENST00000448872 PLEKHD1A6NEE1 506 aa18.65■□□□□ 0.58
RCL1-208ENST00000448872 MAPKBP1O60336 1514 aa18.64■□□□□ 0.57
RCL1-208ENST00000448872 KCNH8Q96L42 1107 aa18.64■□□□□ 0.57
RCL1-208ENST00000448872 LRRIQ1Q96JM4 1722 aa18.63■□□□□ 0.57
RCL1-208ENST00000448872 KANK4Q5T7N3 995 aaPredicted RBP18.63■□□□□ 0.57
RCL1-208ENST00000448872 WDR7Q9Y4E6 1490 aa18.62■□□□□ 0.57
RCL1-208ENST00000448872 MAGI3Q5TCQ9 1506 aa18.62■□□□□ 0.57
RCL1-208ENST00000448872 APLP2Q06481 763 aa18.6■□□□□ 0.57
RCL1-208ENST00000448872 CDK11AQ9UQ88 783 aaPredicted RBP18.6■□□□□ 0.57
RCL1-208ENST00000448872 TIAM1Q13009 1591 aa18.58■□□□□ 0.56
RCL1-208ENST00000448872 PPARGC1BQ86YN6 1023 aaKnown RBP18.58■□□□□ 0.56
RCL1-208ENST00000448872 TROQ12816 1431 aaPredicted RBP18.57■□□□□ 0.56
RCL1-208ENST00000448872 FAM69CQ0P6D2 419 aa18.57■□□□□ 0.56
RCL1-208ENST00000448872 MTUS2Q5JR59 1369 aa18.56■□□□□ 0.56
RCL1-208ENST00000448872 ABCC10Q5T3U5 1492 aa18.55■□□□□ 0.56
RCL1-208ENST00000448872 TRHP20396 242 aaPredicted RBP18.55■□□□□ 0.56
RCL1-208ENST00000448872 MAP3K1Q13233 1512 aa18.54■□□□□ 0.56
RCL1-208ENST00000448872 LRRC9Q6ZRR7 1453 aa18.54■□□□□ 0.56
RCL1-208ENST00000448872 CFAP43Q8NDM7 1665 aa18.52■□□□□ 0.56
RCL1-208ENST00000448872 DIP2BQ9P265 1576 aa18.49■□□□□ 0.55
RCL1-208ENST00000448872 KIF14Q15058 1648 aa18.49■□□□□ 0.55
RCL1-208ENST00000448872 EHBP1L1Q8N3D4 1523 aa18.49■□□□□ 0.55
RCL1-208ENST00000448872 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.47■□□□□ 0.55
RCL1-208ENST00000448872 GLI2P10070 1586 aa18.44■□□□□ 0.54
RCL1-208ENST00000448872 NCOA2Q15596 1464 aa18.43■□□□□ 0.54
RCL1-208ENST00000448872 TTC37Q6PGP7 1564 aa18.43■□□□□ 0.54
RCL1-208ENST00000448872 CD109Q6YHK3 1445 aa18.43■□□□□ 0.54
RCL1-208ENST00000448872 ABCA9Q8IUA7 1624 aa18.4■□□□□ 0.54
RCL1-208ENST00000448872 CCNB3Q8WWL7 1395 aa18.4■□□□□ 0.54
RCL1-208ENST00000448872 PHLDB1Q86UU1 1377 aa18.39■□□□□ 0.53
RCL1-208ENST00000448872 GPATCH8Q9UKJ3 1502 aaKnown RBP18.38■□□□□ 0.53
RCL1-208ENST00000448872 PLCH2O75038 1416 aa18.37■□□□□ 0.53
RCL1-208ENST00000448872 KIF13AQ9H1H9 1805 aa18.36■□□□□ 0.53
RCL1-208ENST00000448872 MAP3K4Q9Y6R4 1608 aa18.36■□□□□ 0.53
RCL1-208ENST00000448872 SUPT6HQ7KZ85 1726 aaKnown RBP18.35■□□□□ 0.53
RCL1-208ENST00000448872 CFDP1Q9UEE9 299 aaPredicted RBP18.33■□□□□ 0.53
RCL1-208ENST00000448872 ZNF777Q9ULD5 760 aaPredicted RBP18.33■□□□□ 0.52
RCL1-208ENST00000448872 ZNF644Q9H582 1327 aaPredicted RBP18.32■□□□□ 0.52
RCL1-208ENST00000448872 ARHGAP5Q13017 1502 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms