RNA–Protein interactions for RNA: ENST00000448872.6

RCL1-208, Transcript of RNA terminal phosphate cyclase like 1, humanhuman

TSL 1 (best) BASIC

Gene RCL1, Length 1,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1-208ENST00000448872 NISCHQ9Y2I1 1504 aa28.1■■■□□ 2.09
RCL1-208ENST00000448872 CCDC180Q9P1Z9 1646 aa24.67■■□□□ 1.54
RCL1-208ENST00000448872 ABCC9O60706 1549 aa24.02■■□□□ 1.44
RCL1-208ENST00000448872 ZCCHC6Q5VYS8 1495 aaKnown RBP23.48■■□□□ 1.35
RCL1-208ENST00000448872 DCAF8L2P0C7V8 631 aa23.48■■□□□ 1.35
RCL1-208ENST00000448872 DCAF1Q9Y4B6 1507 aa23.19■■□□□ 1.3
RCL1-208ENST00000448872 NACADO15069 1562 aa23.18■■□□□ 1.3
RCL1-208ENST00000448872 MYO15BQ96JP2 1530 aa23.14■■□□□ 1.3
RCL1-208ENST00000448872 RB1CC1Q8TDY2 1594 aa23.12■■□□□ 1.29
RCL1-208ENST00000448872 AEBP2Q6ZN18 517 aaPredicted RBP23.04■■□□□ 1.28
RCL1-208ENST00000448872 CHIC1Q5VXU3 224 aa22.98■■□□□ 1.27
RCL1-208ENST00000448872 SCRIBQ14160 1630 aa22.7■■□□□ 1.22
RCL1-208ENST00000448872 PABPN1Q86U42 306 aaKnown RBP eCLIP22.6■■□□□ 1.21
RCL1-208ENST00000448872 SHROOM4Q9ULL8 1493 aa22.58■■□□□ 1.21
RCL1-208ENST00000448872 UNC13AQ9UPW8 1703 aa22.52■■□□□ 1.19
RCL1-208ENST00000448872 BICRAQ9NZM4 1560 aa22.47■■□□□ 1.19
RCL1-208ENST00000448872 CECR2Q9BXF3 1484 aa21.94■■□□□ 1.1
RCL1-208ENST00000448872 EIF4G1Q04637 1599 aaKnown RBP21.84■■□□□ 1.09
RCL1-208ENST00000448872 DNAJC5BQ9UF47 199 aa21.82■■□□□ 1.08
RCL1-208ENST00000448872 BAZ1AQ9NRL2 1556 aaPredicted RBP21.71■■□□□ 1.07
RCL1-208ENST00000448872 MROH2BQ7Z745 1585 aa21.71■■□□□ 1.07
RCL1-208ENST00000448872 SMARCA4P51532 1647 aa21.69■■□□□ 1.06
RCL1-208ENST00000448872 CC2D2AQ9P2K1 1620 aa21.66■■□□□ 1.06
RCL1-208ENST00000448872 RSF1Q96T23 1441 aaPredicted RBP21.61■■□□□ 1.05
RCL1-208ENST00000448872 ATAD2BQ9ULI0 1458 aa21.55■■□□□ 1.04
RCL1-208ENST00000448872 NCAPD3P42695 1498 aa21.46■■□□□ 1.03
RCL1-208ENST00000448872 SMARCA2P51531 1590 aa21.45■■□□□ 1.02
RCL1-208ENST00000448872 PEG3Q9GZU2 1588 aa21.45■■□□□ 1.02
RCL1-208ENST00000448872 WIZO95785 1651 aa21.44■■□□□ 1.02
RCL1-208ENST00000448872 SUPT5HO00267 1087 aaKnown RBP21.41■■□□□ 1.02
RCL1-208ENST00000448872 BAZ1BQ9UIG0 1483 aaKnown RBP21.37■■□□□ 1.01
RCL1-208ENST00000448872 HMGXB3Q12766 1538 aa21.32■■□□□ 1
RCL1-208ENST00000448872 TOP2AP11388 1531 aaKnown RBP21.23■□□□□ 0.99
RCL1-208ENST00000448872 CCDC88BA6NC98 1476 aa21.04■□□□□ 0.96
RCL1-208ENST00000448872 NESP48681 1621 aa20.9■□□□□ 0.94
RCL1-208ENST00000448872 CADPSQ9ULU8 1353 aa20.88■□□□□ 0.93
RCL1-208ENST00000448872 CFTRP13569 1480 aa20.81■□□□□ 0.92
RCL1-208ENST00000448872 LAMC3Q9Y6N6 1575 aa20.75■□□□□ 0.91
RCL1-208ENST00000448872 PDS5BQ9NTI5 1447 aa20.67■□□□□ 0.9
RCL1-208ENST00000448872 FANCD2Q9BXW9 1451 aa20.64■□□□□ 0.89
RCL1-208ENST00000448872 ERCC6Q03468 1493 aa20.63■□□□□ 0.89
RCL1-208ENST00000448872 CEP164Q9UPV0 1460 aa20.54■□□□□ 0.88
RCL1-208ENST00000448872 KIF21AQ7Z4S6 1674 aa20.52■□□□□ 0.87
RCL1-208ENST00000448872 PRDM2Q13029 1718 aa20.45■□□□□ 0.86
RCL1-208ENST00000448872 MRC2Q9UBG0 1479 aa20.44■□□□□ 0.86
RCL1-208ENST00000448872 URB2Q14146 1524 aaKnown RBP20.42■□□□□ 0.86
RCL1-208ENST00000448872 THOC2Q8NI27 1593 aaKnown RBP20.4■□□□□ 0.86
RCL1-208ENST00000448872 ABCC8Q09428 1581 aa20.38■□□□□ 0.85
RCL1-208ENST00000448872 WDR62O43379 1518 aa20.34■□□□□ 0.85
RCL1-208ENST00000448872 WRNQ14191 1432 aaPredicted RBP eCLIP20.33■□□□□ 0.85
RCL1-208ENST00000448872 CUX1P39880 1505 aa20.33■□□□□ 0.84
RCL1-208ENST00000448872 TOPBP1Q92547 1522 aa20.33■□□□□ 0.84
RCL1-208ENST00000448872 PHF23Q9BUL5 403 aaPredicted RBP20.3■□□□□ 0.84
RCL1-208ENST00000448872 DNMBPQ6XZF7 1577 aa20.29■□□□□ 0.84
RCL1-208ENST00000448872 SYNJ1O43426 1573 aa20.26■□□□□ 0.83
RCL1-208ENST00000448872 CUX2O14529 1486 aa20.22■□□□□ 0.83
RCL1-208ENST00000448872 FGD5Q6ZNL6 1462 aa20.2■□□□□ 0.82
RCL1-208ENST00000448872 POLA1P09884 1462 aaPredicted RBP20.2■□□□□ 0.82
RCL1-208ENST00000448872 TOP2BQ02880 1626 aa20.18■□□□□ 0.82
RCL1-208ENST00000448872 RAD54L2Q9Y4B4 1467 aa20.16■□□□□ 0.82
RCL1-208ENST00000448872 TRIM41Q8WV44 630 aa20.16■□□□□ 0.82
RCL1-208ENST00000448872 SOGA1O94964 1423 aa20.14■□□□□ 0.81
RCL1-208ENST00000448872 BIVM-ERCC5R4GMW8 1640 aa20.14■□□□□ 0.81
RCL1-208ENST00000448872 IFT140Q96RY7 1462 aa20.1■□□□□ 0.81
RCL1-208ENST00000448872 ZNF608Q9ULD9 1512 aaPredicted RBP20.05■□□□□ 0.8
RCL1-208ENST00000448872 TARBP1Q13395 1621 aaKnown RBP20.04■□□□□ 0.8
RCL1-208ENST00000448872 TDRD9Q8NDG6 1382 aaKnown RBP20.03■□□□□ 0.8
RCL1-208ENST00000448872 ABCA10Q8WWZ4 1543 aa20■□□□□ 0.79
RCL1-208ENST00000448872 AQRO60306 1485 aaKnown RBP eCLIP20■□□□□ 0.797e-7■■■■■ 29.6
RCL1-208ENST00000448872 WDR97A6NE52 1622 aa19.9■□□□□ 0.78
RCL1-208ENST00000448872 EIF4G3O43432 1585 aaKnown RBP19.89■□□□□ 0.78
RCL1-208ENST00000448872 RUSC2Q8N2Y8 1516 aa19.89■□□□□ 0.77
RCL1-208ENST00000448872 GAPVD1Q14C86 1478 aa19.88■□□□□ 0.77
RCL1-208ENST00000448872 KIF27Q86VH2 1401 aa19.87■□□□□ 0.77
RCL1-208ENST00000448872 ABCA5Q8WWZ7 1642 aa19.84■□□□□ 0.77
RCL1-208ENST00000448872 GRIN2BQ13224 1484 aa19.82■□□□□ 0.76
RCL1-208ENST00000448872 FAM9AQ8IZU1 332 aaPredicted RBP19.81■□□□□ 0.76
RCL1-208ENST00000448872 IGF1RP08069 1367 aa19.8■□□□□ 0.76
RCL1-208ENST00000448872 SNAPC4Q5SXM2 1469 aa19.79■□□□□ 0.76
RCL1-208ENST00000448872 ERICH3Q5RHP9 1530 aa19.73■□□□□ 0.75
RCL1-208ENST00000448872 FBLN2P98095 1184 aa19.71■□□□□ 0.75
RCL1-208ENST00000448872 CSRNP3Q8WYN3 585 aa19.7■□□□□ 0.74
RCL1-208ENST00000448872 MAGI1Q96QZ7 1491 aaPredicted RBP19.7■□□□□ 0.74
RCL1-208ENST00000448872 PBRM1Q86U86 1689 aa19.69■□□□□ 0.74
RCL1-208ENST00000448872 EEA1Q15075 1411 aa19.68■□□□□ 0.74
RCL1-208ENST00000448872 CARMIL1Q5VZK9 1371 aa19.67■□□□□ 0.74
RCL1-208ENST00000448872 FHAD1B1AJZ9 1412 aa19.67■□□□□ 0.74
RCL1-208ENST00000448872 CHMP7Q8WUX9 453 aaPredicted RBP19.67■□□□□ 0.74
RCL1-208ENST00000448872 ADAMTS12P58397 1594 aa19.65■□□□□ 0.74
RCL1-208ENST00000448872 SYNJ2O15056 1496 aa19.64■□□□□ 0.74
RCL1-208ENST00000448872 PRXQ9BXM0 1461 aa19.59■□□□□ 0.73
RCL1-208ENST00000448872 EHMT2Q96KQ7 1210 aa19.59■□□□□ 0.73
RCL1-208ENST00000448872 GRIN2AQ12879 1464 aa19.58■□□□□ 0.72
RCL1-208ENST00000448872 CUL7Q14999 1698 aa19.56■□□□□ 0.72
RCL1-208ENST00000448872 RAPGEF2Q9Y4G8 1499 aa19.55■□□□□ 0.72
RCL1-208ENST00000448872 OSCARQ8IYS5 282 aa19.53■□□□□ 0.72
RCL1-208ENST00000448872 CHD1O14646 1710 aa19.51■□□□□ 0.71
RCL1-208ENST00000448872 NUP160Q12769 1436 aa19.47■□□□□ 0.71
RCL1-208ENST00000448872 CEP170Q5SW79 1584 aa19.46■□□□□ 0.71
RCL1-208ENST00000448872 KIF21BO75037 1637 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 120.2 ms