RNA–Protein interactions for RNA: ENST00000448745.5

CPSF7-206, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CPSF7, Length 1,749 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-206ENST00000448745 CEP162Q5TB80 1403 aa12.68□□□□□ -0.38
CPSF7-206ENST00000448745 SNAPC4Q5SXM2 1469 aa12.68□□□□□ -0.38
CPSF7-206ENST00000448745 ADAMTS12P58397 1594 aa12.68□□□□□ -0.38
CPSF7-206ENST00000448745 GTF3C3Q9Y5Q9 886 aa12.68□□□□□ -0.38
CPSF7-206ENST00000448745 CUL7Q14999 1698 aa12.68□□□□□ -0.38
CPSF7-206ENST00000448745 TNIKQ9UKE5 1360 aa12.67□□□□□ -0.38
CPSF7-206ENST00000448745 MAGI1Q96QZ7 1491 aaPredicted RBP12.67□□□□□ -0.38
CPSF7-206ENST00000448745 CARMIL1Q5VZK9 1371 aa12.67□□□□□ -0.38
CPSF7-206ENST00000448745 KIF21BO75037 1637 aa12.65□□□□□ -0.38
CPSF7-206ENST00000448745 FHAD1B1AJZ9 1412 aa12.64□□□□□ -0.39
CPSF7-206ENST00000448745 RAPGEF2Q9Y4G8 1499 aa12.64□□□□□ -0.39
CPSF7-206ENST00000448745 SYNJ2O15056 1496 aa12.62□□□□□ -0.39
CPSF7-206ENST00000448745 ZNF316A6NFI3 1004 aaPredicted RBP12.61□□□□□ -0.39
CPSF7-206ENST00000448745 GRIN2AQ12879 1464 aa12.59□□□□□ -0.39
CPSF7-206ENST00000448745 CHD1O14646 1710 aa12.59□□□□□ -0.39
CPSF7-206ENST00000448745 GOLGA3Q08378 1498 aa12.59□□□□□ -0.39
CPSF7-206ENST00000448745 NUP160Q12769 1436 aa12.55□□□□□ -0.4
CPSF7-206ENST00000448745 CHMP7Q8WUX9 453 aaPredicted RBP12.54□□□□□ -0.4
CPSF7-206ENST00000448745 CEP170Q5SW79 1584 aa12.54□□□□□ -0.4
CPSF7-206ENST00000448745 FBLN2P98095 1184 aa12.52□□□□□ -0.41
CPSF7-206ENST00000448745 CTTNBP2Q8WZ74 1663 aa12.5□□□□□ -0.41
CPSF7-206ENST00000448745 KIAA0586Q9BVV6 1533 aa12.48□□□□□ -0.41
CPSF7-206ENST00000448745 CLASP1Q7Z460 1538 aa12.47□□□□□ -0.41
CPSF7-206ENST00000448745 UBTFP17480 764 aaKnown RBP12.47□□□□□ -0.41
CPSF7-206ENST00000448745 SENP3Q9H4L4 574 aaPredicted RBP12.47□□□□□ -0.41
CPSF7-206ENST00000448745 TTBK1Q5TCY1 1321 aaPredicted RBP12.45□□□□□ -0.42
CPSF7-206ENST00000448745 IQGAP2Q13576 1575 aa12.45□□□□□ -0.42
CPSF7-206ENST00000448745 CLSPNQ9HAW4 1339 aa12.43□□□□□ -0.42
CPSF7-206ENST00000448745 OSCARQ8IYS5 282 aa12.42□□□□□ -0.42
CPSF7-206ENST00000448745 SHROOM2Q13796 1616 aa12.42□□□□□ -0.42
CPSF7-206ENST00000448745 UGGT2Q9NYU1 1516 aa12.41□□□□□ -0.42
CPSF7-206ENST00000448745 VPS8Q8N3P4 1428 aa12.41□□□□□ -0.42
CPSF7-206ENST00000448745 CLIP1P30622 1438 aa12.39□□□□□ -0.43
CPSF7-206ENST00000448745 YTHDC1Q96MU7 727 aaKnown RBP12.39□□□□□ -0.43
CPSF7-206ENST00000448745 JPH4Q96JJ6 628 aa12.38□□□□□ -0.43
CPSF7-206ENST00000448745 SAMD9Q5K651 1589 aa12.38□□□□□ -0.43
CPSF7-206ENST00000448745 DISP1Q96F81 1524 aa12.38□□□□□ -0.43
CPSF7-206ENST00000448745 MIER1Q8N108 512 aa12.37□□□□□ -0.43
CPSF7-206ENST00000448745 ARHGAP35Q9NRY4 1499 aa12.37□□□□□ -0.43
CPSF7-206ENST00000448745 ERCC6L2Q5T890 1561 aa12.35□□□□□ -0.43
CPSF7-206ENST00000448745 KIAA0556O60303 1618 aa12.34□□□□□ -0.43
CPSF7-206ENST00000448745 EFCAB5A4FU69 1503 aa12.33□□□□□ -0.43
CPSF7-206ENST00000448745 PRG4Q92954 1404 aaPredicted RBP12.33□□□□□ -0.44
CPSF7-206ENST00000448745 ARAP1Q96P48 1450 aa12.33□□□□□ -0.44
CPSF7-206ENST00000448745 RANGAP1P46060 587 aaPredicted RBP12.33□□□□□ -0.44
CPSF7-206ENST00000448745 APLP2Q06481 763 aa12.33□□□□□ -0.44
CPSF7-206ENST00000448745 HNRNPUL2Q1KMD3 747 aaKnown RBP12.32□□□□□ -0.44
CPSF7-206ENST00000448745 FHOD3Q2V2M9 1422 aa12.29□□□□□ -0.44
CPSF7-206ENST00000448745 P3H3Q8IVL6 736 aa12.28□□□□□ -0.44
CPSF7-206ENST00000448745 CARMIL2Q6F5E8 1435 aa12.27□□□□□ -0.44
CPSF7-206ENST00000448745 ARHGEF11O15085 1522 aa12.27□□□□□ -0.45
CPSF7-206ENST00000448745 PLPPR3Q6T4P5 718 aa12.25□□□□□ -0.45
CPSF7-206ENST00000448745 RIMBP3CA6NJZ7 1639 aa12.23□□□□□ -0.45
CPSF7-206ENST00000448745 RIMBP3BA6NNM3 1639 aa12.23□□□□□ -0.45
CPSF7-206ENST00000448745 RIMBP3Q9UFD9 1639 aa12.23□□□□□ -0.45
CPSF7-206ENST00000448745 DHX57Q6P158 1386 aaKnown RBP12.22□□□□□ -0.45
CPSF7-206ENST00000448745 PTPRGP23470 1445 aa12.21□□□□□ -0.46
CPSF7-206ENST00000448745 FMN1Q68DA7 1419 aa12.21□□□□□ -0.46
CPSF7-206ENST00000448745 ABCA8O94911 1581 aa12.2□□□□□ -0.46
CPSF7-206ENST00000448745 PLB1Q6P1J6 1458 aa12.2□□□□□ -0.46
CPSF7-206ENST00000448745 PCF11O94913 1555 aaKnown RBP12.19□□□□□ -0.46
CPSF7-206ENST00000448745 CASKIN1Q8WXD9 1431 aa12.18□□□□□ -0.46
CPSF7-206ENST00000448745 LRRIQ1Q96JM4 1722 aa12.17□□□□□ -0.46
CPSF7-206ENST00000448745 RRBP1Q9P2E9 1410 aaKnown RBP12.17□□□□□ -0.46
CPSF7-206ENST00000448745 RAPGEF6Q8TEU7 1601 aa12.16□□□□□ -0.46
CPSF7-206ENST00000448745 SUPT16HQ9Y5B9 1047 aaKnown RBP12.16□□□□□ -0.46
CPSF7-206ENST00000448745 NUP153P49790 1475 aaKnown RBP12.16□□□□□ -0.46
CPSF7-206ENST00000448745 FYCO1Q9BQS8 1478 aa12.15□□□□□ -0.46
CPSF7-206ENST00000448745 UACAQ9BZF9 1416 aa12.15□□□□□ -0.46
CPSF7-206ENST00000448745 ADCY10Q96PN6 1610 aa12.14□□□□□ -0.47
CPSF7-206ENST00000448745 UHRF1BP1LA0JNW5 1464 aa12.14□□□□□ -0.47
CPSF7-206ENST00000448745 ABCC2Q92887 1545 aa12.14□□□□□ -0.47
CPSF7-206ENST00000448745 HECW1Q76N89 1606 aa12.11□□□□□ -0.47
CPSF7-206ENST00000448745 EPRSP07814 1512 aaKnown RBP12.11□□□□□ -0.47
CPSF7-206ENST00000448745 CYB5RLQ6IPT4 315 aa12.1□□□□□ -0.47
CPSF7-206ENST00000448745 ATP10BO94823 1461 aa12.09□□□□□ -0.47
CPSF7-206ENST00000448745 CDK13Q14004 1512 aaKnown RBP12.09□□□□□ -0.47
CPSF7-206ENST00000448745 KDM5BQ9UGL1 1544 aa12.09□□□□□ -0.47
CPSF7-206ENST00000448745 MAP3K1Q13233 1512 aa12.08□□□□□ -0.48
CPSF7-206ENST00000448745 CFAP43Q8NDM7 1665 aa12.08□□□□□ -0.48
CPSF7-206ENST00000448745 TIAM1Q13009 1591 aa12.07□□□□□ -0.48
CPSF7-206ENST00000448745 ZCCHC11Q5TAX3 1644 aaKnown RBP12.06□□□□□ -0.48
CPSF7-206ENST00000448745 MAGI3Q5TCQ9 1506 aa12.06□□□□□ -0.48
CPSF7-206ENST00000448745 CCNB3Q8WWL7 1395 aa12.06□□□□□ -0.48
CPSF7-206ENST00000448745 CCDC18Q5T9S5 1454 aa12.06□□□□□ -0.48
CPSF7-206ENST00000448745 ARID3CA6NKF2 412 aa12.05□□□□□ -0.48
CPSF7-206ENST00000448745 KANK4Q5T7N3 995 aaPredicted RBP12.04□□□□□ -0.48
CPSF7-206ENST00000448745 TSHZ2Q9NRE2 1034 aa12.04□□□□□ -0.48
CPSF7-206ENST00000448745 ATP1B4Q9UN42 357 aaPredicted RBP12.04□□□□□ -0.48
CPSF7-206ENST00000448745 ANP32EQ9BTT0 268 aa12.03□□□□□ -0.48
CPSF7-206ENST00000448745 LRRC9Q6ZRR7 1453 aa12.02□□□□□ -0.49
CPSF7-206ENST00000448745 MAPKBP1O60336 1514 aa12.01□□□□□ -0.49
CPSF7-206ENST00000448745 TROQ12816 1431 aaPredicted RBP11.98□□□□□ -0.49
CPSF7-206ENST00000448745 ASXL2Q76L83 1435 aa11.98□□□□□ -0.49
CPSF7-206ENST00000448745 EHBP1L1Q8N3D4 1523 aa11.97□□□□□ -0.49
CPSF7-206ENST00000448745 WDR7Q9Y4E6 1490 aa11.96□□□□□ -0.49
CPSF7-206ENST00000448745 RAB3GAP2Q9H2M9 1393 aa11.96□□□□□ -0.49
CPSF7-206ENST00000448745 KIF14Q15058 1648 aa11.96□□□□□ -0.5
CPSF7-206ENST00000448745 MTUS2Q5JR59 1369 aa11.95□□□□□ -0.5
CPSF7-206ENST00000448745 SETD5Q9C0A6 1442 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms