RNA–Protein interactions for RNA: ENST00000448056.1

AC004540.1-206, humanhuman

TSL 3

Gene AC004540.1, Length 567 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-206ENST00000448056 POTEDQ86YR6 584 aa12.51□□□□□ -0.41
AC004540.1-206ENST00000448056 SNAPC4Q5SXM2 1469 aa12.51□□□□□ -0.41
AC004540.1-206ENST00000448056 FBLN2P98095 1184 aa12.5□□□□□ -0.41
AC004540.1-206ENST00000448056 CHMP7Q8WUX9 453 aaPredicted RBP12.5□□□□□ -0.41
AC004540.1-206ENST00000448056 EEA1Q15075 1411 aa12.5□□□□□ -0.41
AC004540.1-206ENST00000448056 MAGI1Q96QZ7 1491 aaPredicted RBP12.5□□□□□ -0.41
AC004540.1-206ENST00000448056 CARMIL1Q5VZK9 1371 aa12.48□□□□□ -0.41
AC004540.1-206ENST00000448056 PBRM1Q86U86 1689 aa12.48□□□□□ -0.41
AC004540.1-206ENST00000448056 FHAD1B1AJZ9 1412 aa12.47□□□□□ -0.41
AC004540.1-206ENST00000448056 SYNJ2O15056 1496 aa12.46□□□□□ -0.42
AC004540.1-206ENST00000448056 DCAF8L1A6NGE4 600 aa12.44□□□□□ -0.42
AC004540.1-206ENST00000448056 OSCARQ8IYS5 282 aa12.44□□□□□ -0.42
AC004540.1-206ENST00000448056 ADAMTS12P58397 1594 aa12.42□□□□□ -0.42
AC004540.1-206ENST00000448056 PRXQ9BXM0 1461 aa12.41□□□□□ -0.42
AC004540.1-206ENST00000448056 CUL7Q14999 1698 aa12.41□□□□□ -0.42
AC004540.1-206ENST00000448056 RAPGEF2Q9Y4G8 1499 aa12.4□□□□□ -0.42
AC004540.1-206ENST00000448056 SLC4A2P04920 1241 aa12.4□□□□□ -0.42
AC004540.1-206ENST00000448056 GRIN2AQ12879 1464 aa12.4□□□□□ -0.43
AC004540.1-206ENST00000448056 ZBTB22O15209 634 aa12.39□□□□□ -0.43
AC004540.1-206ENST00000448056 CHD1O14646 1710 aa12.36□□□□□ -0.43
AC004540.1-206ENST00000448056 NUP160Q12769 1436 aa12.35□□□□□ -0.43
AC004540.1-206ENST00000448056 FOXD4L1Q9NU39 408 aa12.33□□□□□ -0.44
AC004540.1-206ENST00000448056 KIF21BO75037 1637 aa12.31□□□□□ -0.44
AC004540.1-206ENST00000448056 UBTFP17480 764 aaKnown RBP12.31□□□□□ -0.44
AC004540.1-206ENST00000448056 CEP170Q5SW79 1584 aa12.3□□□□□ -0.44
AC004540.1-206ENST00000448056 LOC105371045A0A1W2PR82 267 aa12.3□□□□□ -0.44
AC004540.1-206ENST00000448056 JPH4Q96JJ6 628 aa12.3□□□□□ -0.44
AC004540.1-206ENST00000448056 KIAA0586Q9BVV6 1533 aa12.3□□□□□ -0.44
AC004540.1-206ENST00000448056 GOLGA3Q08378 1498 aa12.28□□□□□ -0.44
AC004540.1-206ENST00000448056 CLASP1Q7Z460 1538 aa12.27□□□□□ -0.45
AC004540.1-206ENST00000448056 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.23□□□□□ -0.45
AC004540.1-206ENST00000448056 TNIKQ9UKE5 1360 aa12.21□□□□□ -0.45
AC004540.1-206ENST00000448056 RANGAP1P46060 587 aaPredicted RBP12.21□□□□□ -0.45
AC004540.1-206ENST00000448056 IQGAP2Q13576 1575 aa12.21□□□□□ -0.46
AC004540.1-206ENST00000448056 PRG4Q92954 1404 aaPredicted RBP12.2□□□□□ -0.46
AC004540.1-206ENST00000448056 SHROOM2Q13796 1616 aa12.18□□□□□ -0.46
AC004540.1-206ENST00000448056 UGGT2Q9NYU1 1516 aa12.17□□□□□ -0.46
AC004540.1-206ENST00000448056 CTTNBP2Q8WZ74 1663 aa12.17□□□□□ -0.46
AC004540.1-206ENST00000448056 CARMIL2Q6F5E8 1435 aa12.16□□□□□ -0.46
AC004540.1-206ENST00000448056 P3H3Q8IVL6 736 aa12.15□□□□□ -0.46
AC004540.1-206ENST00000448056 ARHGEF11O15085 1522 aa12.15□□□□□ -0.46
AC004540.1-206ENST00000448056 DISP1Q96F81 1524 aa12.15□□□□□ -0.46
AC004540.1-206ENST00000448056 ERCC6L2Q5T890 1561 aa12.14□□□□□ -0.47
AC004540.1-206ENST00000448056 CYB5RLQ6IPT4 315 aa12.12□□□□□ -0.47
AC004540.1-206ENST00000448056 MYCNP04198 464 aaPredicted RBP12.11□□□□□ -0.47
AC004540.1-206ENST00000448056 RIMBP3CA6NJZ7 1639 aa12.11□□□□□ -0.47
AC004540.1-206ENST00000448056 RIMBP3BA6NNM3 1639 aa12.11□□□□□ -0.47
AC004540.1-206ENST00000448056 RIMBP3Q9UFD9 1639 aa12.11□□□□□ -0.47
AC004540.1-206ENST00000448056 PTPRGP23470 1445 aa12.11□□□□□ -0.47
AC004540.1-206ENST00000448056 TTBK1Q5TCY1 1321 aaPredicted RBP12.11□□□□□ -0.47
AC004540.1-206ENST00000448056 CLIP1P30622 1438 aa12.09□□□□□ -0.47
AC004540.1-206ENST00000448056 CEP162Q5TB80 1403 aa12.09□□□□□ -0.47
AC004540.1-206ENST00000448056 ARHGAP35Q9NRY4 1499 aa12.08□□□□□ -0.47
AC004540.1-206ENST00000448056 KIAA0556O60303 1618 aa12.08□□□□□ -0.48
AC004540.1-206ENST00000448056 EFCAB5A4FU69 1503 aa12.07□□□□□ -0.48
AC004540.1-206ENST00000448056 SAMD9Q5K651 1589 aa12.07□□□□□ -0.48
AC004540.1-206ENST00000448056 U3KPZ7 1027 aaPredicted RBP12.07□□□□□ -0.48
AC004540.1-206ENST00000448056 ARAP1Q96P48 1450 aa12.07□□□□□ -0.48
AC004540.1-206ENST00000448056 FHOD3Q2V2M9 1422 aa12.06□□□□□ -0.48
AC004540.1-206ENST00000448056 UACAQ9BZF9 1416 aa12.01□□□□□ -0.49
AC004540.1-206ENST00000448056 FMN1Q68DA7 1419 aa12□□□□□ -0.49
AC004540.1-206ENST00000448056 PLB1Q6P1J6 1458 aa12□□□□□ -0.49
AC004540.1-206ENST00000448056 RNF39Q9H2S5 420 aa11.99□□□□□ -0.49
AC004540.1-206ENST00000448056 UHRF1BP1LA0JNW5 1464 aa11.97□□□□□ -0.49
AC004540.1-206ENST00000448056 NPM1P06748 294 aaKnown RBP eCLIP11.97□□□□□ -0.49
AC004540.1-206ENST00000448056 ATP1B4Q9UN42 357 aaPredicted RBP11.97□□□□□ -0.49
AC004540.1-206ENST00000448056 ABCA8O94911 1581 aa11.96□□□□□ -0.5
AC004540.1-206ENST00000448056 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.95□□□□□ -0.5
AC004540.1-206ENST00000448056 HNRNPUL2Q1KMD3 747 aaKnown RBP11.95□□□□□ -0.5
AC004540.1-206ENST00000448056 ARID3CA6NKF2 412 aa11.94□□□□□ -0.5
AC004540.1-206ENST00000448056 ATXN8OSP0DMR3 200 aa11.94□□□□□ -0.5
AC004540.1-206ENST00000448056 ABCC2Q92887 1545 aa11.94□□□□□ -0.5
AC004540.1-206ENST00000448056 CASKIN1Q8WXD9 1431 aa11.94□□□□□ -0.5
AC004540.1-206ENST00000448056 ADCY10Q96PN6 1610 aa11.93□□□□□ -0.5
AC004540.1-206ENST00000448056 RAPGEF6Q8TEU7 1601 aa11.92□□□□□ -0.5
AC004540.1-206ENST00000448056 VPS8Q8N3P4 1428 aa11.92□□□□□ -0.5
AC004540.1-206ENST00000448056 ATP10BO94823 1461 aa11.91□□□□□ -0.5
AC004540.1-206ENST00000448056 NUP153P49790 1475 aaKnown RBP11.91□□□□□ -0.5
AC004540.1-206ENST00000448056 SAMD1Q6SPF0 538 aaPredicted RBP11.91□□□□□ -0.5
AC004540.1-206ENST00000448056 KDM5BQ9UGL1 1544 aa11.91□□□□□ -0.5
AC004540.1-206ENST00000448056 FYCO1Q9BQS8 1478 aa11.89□□□□□ -0.51
AC004540.1-206ENST00000448056 EPRSP07814 1512 aaKnown RBP11.87□□□□□ -0.51
AC004540.1-206ENST00000448056 PLEKHD1A6NEE1 506 aa11.87□□□□□ -0.51
AC004540.1-206ENST00000448056 PCF11O94913 1555 aaKnown RBP11.87□□□□□ -0.51
AC004540.1-206ENST00000448056 CDK11AQ9UQ88 783 aaPredicted RBP11.86□□□□□ -0.51
AC004540.1-206ENST00000448056 HECW1Q76N89 1606 aa11.86□□□□□ -0.51
AC004540.1-206ENST00000448056 C1QBPQ07021 282 aaKnown RBP11.85□□□□□ -0.51
AC004540.1-206ENST00000448056 ASXL2Q76L83 1435 aa11.85□□□□□ -0.51
AC004540.1-206ENST00000448056 APLP2Q06481 763 aa11.84□□□□□ -0.51
AC004540.1-206ENST00000448056 ZCCHC11Q5TAX3 1644 aaKnown RBP11.84□□□□□ -0.51
AC004540.1-206ENST00000448056 CDK13Q14004 1512 aaKnown RBP11.84□□□□□ -0.51
AC004540.1-206ENST00000448056 CCDC18Q5T9S5 1454 aa11.83□□□□□ -0.52
AC004540.1-206ENST00000448056 KCNH8Q96L42 1107 aa11.83□□□□□ -0.52
AC004540.1-206ENST00000448056 MAPKBP1O60336 1514 aa11.82□□□□□ -0.52
AC004540.1-206ENST00000448056 ATF5Q9Y2D1 282 aaPredicted RBP11.81□□□□□ -0.52
AC004540.1-206ENST00000448056 KANK4Q5T7N3 995 aaPredicted RBP11.8□□□□□ -0.52
AC004540.1-206ENST00000448056 WDR7Q9Y4E6 1490 aa11.8□□□□□ -0.52
AC004540.1-206ENST00000448056 FAM69CQ0P6D2 419 aa11.79□□□□□ -0.52
AC004540.1-206ENST00000448056 LRRIQ1Q96JM4 1722 aa11.79□□□□□ -0.52
AC004540.1-206ENST00000448056 MAP3K1Q13233 1512 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms